RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 ATG101Q9BSB4 218 aa9.73□□□□□ -0.85
RTFDC1-204ENST00000449062 TRGV11A0A075B6L2 103 aa9.72□□□□□ -0.85
RTFDC1-204ENST00000449062 A0A0D9SG52 128 aa9.72□□□□□ -0.85
RTFDC1-204ENST00000449062 SEC11BP0C7V7 166 aa9.72□□□□□ -0.85
RTFDC1-204ENST00000449062 FGF8P55075 233 aaPredicted RBP9.72□□□□□ -0.85
RTFDC1-204ENST00000449062 TMEM75Q8N9X5 138 aa9.72□□□□□ -0.85
RTFDC1-204ENST00000449062 MBD3L1Q8WWY6 194 aa9.72□□□□□ -0.85
RTFDC1-204ENST00000449062 KIAA1109Q2LD37 5005 aa9.72□□□□□ -0.85
RTFDC1-204ENST00000449062 HERC2O95714 4834 aa9.72□□□□□ -0.85
RTFDC1-204ENST00000449062 NBDYA0A0U1RRE5 68 aa9.71□□□□□ -0.86
RTFDC1-204ENST00000449062 FBLL1A6NHQ2 334 aaKnown RBP9.71□□□□□ -0.86
RTFDC1-204ENST00000449062 IGHV3-53P01767 116 aa9.71□□□□□ -0.86
RTFDC1-204ENST00000449062 TYMSP04818 313 aa9.71□□□□□ -0.86
RTFDC1-204ENST00000449062 CRYBA4P53673 196 aa9.71□□□□□ -0.86
RTFDC1-204ENST00000449062 ZNF479Q96JC4 524 aa9.71□□□□□ -0.86
RTFDC1-204ENST00000449062 UPK3BQ9BT76 320 aa9.71□□□□□ -0.86
RTFDC1-204ENST00000449062 NKX6-2Q9C056 277 aaPredicted RBP9.71□□□□□ -0.86
RTFDC1-204ENST00000449062 PRO0255Q9UI72 69 aa9.71□□□□□ -0.86
RTFDC1-204ENST00000449062 TRAV34A0A0B4J273 112 aa9.7□□□□□ -0.86
RTFDC1-204ENST00000449062 MAP1LC3B2A6NCE7 125 aa9.7□□□□□ -0.86
RTFDC1-204ENST00000449062 K7EQM0 130 aa9.7□□□□□ -0.86
RTFDC1-204ENST00000449062 GCGP01275 180 aa9.7□□□□□ -0.86
RTFDC1-204ENST00000449062 PFN1P07737 140 aaKnown RBP9.7□□□□□ -0.86
RTFDC1-204ENST00000449062 UBE2G2P60604 165 aa9.7□□□□□ -0.86
RTFDC1-204ENST00000449062 SLAQ13239 276 aa9.7□□□□□ -0.86
RTFDC1-204ENST00000449062 SAPCD1Q5SSQ6 148 aa9.7□□□□□ -0.86
RTFDC1-204ENST00000449062 COX8CQ7Z4L0 72 aa9.7□□□□□ -0.86
RTFDC1-204ENST00000449062 PRNTQ86SH4 94 aa9.7□□□□□ -0.86
RTFDC1-204ENST00000449062 ZNF575Q86XF7 245 aa9.7□□□□□ -0.86
RTFDC1-204ENST00000449062 KCNS1Q96KK3 526 aa9.7□□□□□ -0.86
RTFDC1-204ENST00000449062 MAP1LC3BQ9GZQ8 125 aa9.7□□□□□ -0.86
RTFDC1-204ENST00000449062 Q9H8V8 135 aa9.7□□□□□ -0.86
RTFDC1-204ENST00000449062 NAGKQ9UJ70 344 aa9.7□□□□□ -0.86
RTFDC1-204ENST00000449062 HHLA3Q9XRX5 114 aa9.7□□□□□ -0.86
RTFDC1-204ENST00000449062 M0R2P5 195 aa9.69□□□□□ -0.86
RTFDC1-204ENST00000449062 PAX4O43316 350 aa9.69□□□□□ -0.86
RTFDC1-204ENST00000449062 BCL2L11O43521 198 aa9.69□□□□□ -0.86
RTFDC1-204ENST00000449062 SFTA3P0C7M3 94 aa9.69□□□□□ -0.86
RTFDC1-204ENST00000449062 SMUG1Q53HV7 270 aa9.69□□□□□ -0.86
RTFDC1-204ENST00000449062 C1orf134Q5TEV5 83 aa9.69□□□□□ -0.86
RTFDC1-204ENST00000449062 Q6ZNX1 250 aa9.69□□□□□ -0.86
RTFDC1-204ENST00000449062 HIST1H2BAQ96A08 127 aa9.69□□□□□ -0.86
RTFDC1-204ENST00000449062 NDFIP1Q9BT67 221 aa9.69□□□□□ -0.86
RTFDC1-204ENST00000449062 MRPS16Q9Y3D3 137 aaKnown RBP9.69□□□□□ -0.86
RTFDC1-204ENST00000449062 PRSS29PA6NIE9 313 aa9.68□□□□□ -0.86
RTFDC1-204ENST00000449062 UMAD1C9J7I0 102 aa9.68□□□□□ -0.86
RTFDC1-204ENST00000449062 PEX7O00628 323 aa9.68□□□□□ -0.86
RTFDC1-204ENST00000449062 IFNA7P01567 189 aa9.68□□□□□ -0.86
RTFDC1-204ENST00000449062 CRIP1P50238 77 aa9.68□□□□□ -0.86
RTFDC1-204ENST00000449062 TMUB2Q71RG4 321 aa9.68□□□□□ -0.86
RTFDC1-204ENST00000449062 PTH2Q96A98 100 aa9.68□□□□□ -0.86
RTFDC1-204ENST00000449062 C9orf85Q96MD7 179 aa9.68□□□□□ -0.86
RTFDC1-204ENST00000449062 KRTAP1-5Q9BYS1 174 aa9.68□□□□□ -0.86
RTFDC1-204ENST00000449062 SDF2L1Q9HCN8 221 aa9.68□□□□□ -0.86
RTFDC1-204ENST00000449062 ARL2-SNX15V9GYD0 113 aa9.68□□□□□ -0.86
RTFDC1-204ENST00000449062 IGKV3D-20A0A0C4DH25 116 aa9.67□□□□□ -0.86
RTFDC1-204ENST00000449062 RNASE3P12724 160 aaKnown RBP9.67□□□□□ -0.86
RTFDC1-204ENST00000449062 LGALSLQ3ZCW2 172 aaPredicted RBP9.67□□□□□ -0.86
RTFDC1-204ENST00000449062 DPPA3Q6W0C5 159 aa9.67□□□□□ -0.86
RTFDC1-204ENST00000449062 ZNF471Q9BX82 626 aaPredicted RBP9.67□□□□□ -0.86
RTFDC1-204ENST00000449062 TRAV4A0A0B4J268 109 aa9.66□□□□□ -0.86
RTFDC1-204ENST00000449062 TRBV6-1A0A0K0K1D8 114 aa9.66□□□□□ -0.86
RTFDC1-204ENST00000449062 LYPD5Q6UWN5 251 aa9.66□□□□□ -0.86
RTFDC1-204ENST00000449062 TCTE3Q8IZS6 198 aa9.66□□□□□ -0.86
RTFDC1-204ENST00000449062 STOML3Q8TAV4 291 aa9.66□□□□□ -0.86
RTFDC1-204ENST00000449062 SFT2D1Q8WV19 159 aa9.66□□□□□ -0.86
RTFDC1-204ENST00000449062 KANTRA0A1W2PQU2 76 aa9.65□□□□□ -0.86
RTFDC1-204ENST00000449062 FABP5P3A8MUU1 101 aa9.65□□□□□ -0.86
RTFDC1-204ENST00000449062 MRPL23Q16540 153 aaKnown RBP9.65□□□□□ -0.86
RTFDC1-204ENST00000449062 Q86TA4 180 aa9.65□□□□□ -0.86
RTFDC1-204ENST00000449062 FAM213BQ8TBF2 198 aa9.65□□□□□ -0.86
RTFDC1-204ENST00000449062 TCEAL7Q9BRU2 100 aa9.65□□□□□ -0.86
RTFDC1-204ENST00000449062 ZFP30Q9Y2G7 519 aa9.65□□□□□ -0.86
RTFDC1-204ENST00000449062 ICOSQ9Y6W8 199 aa9.65□□□□□ -0.86
RTFDC1-204ENST00000449062 TRGV4A0A0C4DH28 118 aa9.64□□□□□ -0.87
RTFDC1-204ENST00000449062 PGPEP1LA6NFU8 196 aa9.64□□□□□ -0.87
RTFDC1-204ENST00000449062 K7EQD1 137 aa9.64□□□□□ -0.87
RTFDC1-204ENST00000449062 RS1O15537 224 aa9.64□□□□□ -0.87
RTFDC1-204ENST00000449062 PAGE4O60829 102 aa9.64□□□□□ -0.87
RTFDC1-204ENST00000449062 GATA1P15976 413 aaPredicted RBP9.64□□□□□ -0.87
RTFDC1-204ENST00000449062 PPT1P50897 306 aa9.64□□□□□ -0.87
RTFDC1-204ENST00000449062 ZNF876PQ49A33 203 aa9.64□□□□□ -0.87
RTFDC1-204ENST00000449062 SOHLH1Q5JUK2 328 aa9.64□□□□□ -0.87
RTFDC1-204ENST00000449062 C6orf223Q8N319 242 aa9.64□□□□□ -0.87
RTFDC1-204ENST00000449062 OR4C5Q8NGB2 326 aa9.64□□□□□ -0.87
RTFDC1-204ENST00000449062 ZC2HC1AQ96GY0 325 aa9.64□□□□□ -0.87
RTFDC1-204ENST00000449062 TRAV1-1A0A0B4J248 108 aa9.63□□□□□ -0.87
RTFDC1-204ENST00000449062 A0A1W2PPQ1 181 aa9.63□□□□□ -0.87
RTFDC1-204ENST00000449062 LTAP01374 205 aa9.63□□□□□ -0.87
RTFDC1-204ENST00000449062 EIF5AP63241 154 aaKnown RBP9.63□□□□□ -0.87
RTFDC1-204ENST00000449062 CCL20P78556 96 aa9.63□□□□□ -0.87
RTFDC1-204ENST00000449062 ZFP69Q49AA0 526 aa9.63□□□□□ -0.87
RTFDC1-204ENST00000449062 DNLZQ5SXM8 178 aa9.63□□□□□ -0.87
RTFDC1-204ENST00000449062 CFAP126Q5VTH2 177 aa9.63□□□□□ -0.87
RTFDC1-204ENST00000449062 CST9LP1Q5W188 147 aa9.63□□□□□ -0.87
RTFDC1-204ENST00000449062 NEGR1Q7Z3B1 354 aa9.63□□□□□ -0.87
RTFDC1-204ENST00000449062 FMC1Q96HJ9 113 aa9.63□□□□□ -0.87
RTFDC1-204ENST00000449062 KRBOX1C9JBD0 128 aa9.62□□□□□ -0.87
RTFDC1-204ENST00000449062 C9JCJ5 164 aa9.62□□□□□ -0.87
RTFDC1-204ENST00000449062 H2AFB1P0C5Y9 115 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms