RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 PPT1P50897 306 aa10.28□□□□□ -0.76
USP39-206ENST00000448971 TCL1AP56279 114 aa10.28□□□□□ -0.76
USP39-206ENST00000448971 DPPA3Q6W0C5 159 aa10.28□□□□□ -0.76
USP39-206ENST00000448971 PRNTQ86SH4 94 aa10.28□□□□□ -0.76
USP39-206ENST00000448971 SFT2D1Q8WV19 159 aa10.28□□□□□ -0.76
USP39-206ENST00000448971 NKX6-2Q9C056 277 aaPredicted RBP10.28□□□□□ -0.76
USP39-206ENST00000448971 PSG8Q9UQ74 426 aa10.28□□□□□ -0.76
USP39-206ENST00000448971 TRGV11A0A075B6L2 103 aa10.27□□□□□ -0.77
USP39-206ENST00000448971 TRGV2A0A075B6R0 118 aa10.27□□□□□ -0.77
USP39-206ENST00000448971 FBLL1A6NHQ2 334 aaKnown RBP10.27□□□□□ -0.77
USP39-206ENST00000448971 PEX7O00628 323 aa10.27□□□□□ -0.77
USP39-206ENST00000448971 DAZ2Q13117 558 aaKnown RBP10.27□□□□□ -0.77
USP39-206ENST00000448971 TMEM183BQ1AE95 376 aa10.27□□□□□ -0.77
USP39-206ENST00000448971 LGALSLQ3ZCW2 172 aaPredicted RBP10.27□□□□□ -0.77
USP39-206ENST00000448971 CST9LP1Q5W188 147 aa10.27□□□□□ -0.77
USP39-206ENST00000448971 EIF5AL1Q6IS14 154 aaKnown RBP10.27□□□□□ -0.77
USP39-206ENST00000448971 Q6ZTI0 123 aa10.27□□□□□ -0.77
USP39-206ENST00000448971 TMEM183AQ8IXX5 376 aa10.27□□□□□ -0.77
USP39-206ENST00000448971 LINC00612Q8N6U2 182 aa10.27□□□□□ -0.77
USP39-206ENST00000448971 TVP23CQ96ET8 276 aa10.27□□□□□ -0.77
USP39-206ENST00000448971 KLF12Q9Y4X4 402 aa10.27□□□□□ -0.77
USP39-206ENST00000448971 DNAH11Q96DT5 4516 aa10.26□□□□□ -0.77
USP39-206ENST00000448971 A0A1B0GVY2 172 aa10.26□□□□□ -0.77
USP39-206ENST00000448971 H2AFB1P0C5Y9 115 aa10.26□□□□□ -0.77
USP39-206ENST00000448971 P0DMU3 169 aa10.26□□□□□ -0.77
USP39-206ENST00000448971 FAM231AP0DMU4 169 aa10.26□□□□□ -0.77
USP39-206ENST00000448971 FAM231CP0DMU5 169 aa10.26□□□□□ -0.77
USP39-206ENST00000448971 UBE2DNLQ8IWF7 75 aa10.26□□□□□ -0.77
USP39-206ENST00000448971 HIST1H2BAQ96A08 127 aa10.26□□□□□ -0.77
USP39-206ENST00000448971 C8orf49Q96NF6 230 aa10.26□□□□□ -0.77
USP39-206ENST00000448971 MRPL16Q9NX20 251 aaKnown RBP10.26□□□□□ -0.77
USP39-206ENST00000448971 PKD1P98161 4303 aa10.25□□□□□ -0.77
USP39-206ENST00000448971 TRAV34A0A0B4J273 112 aa10.25□□□□□ -0.77
USP39-206ENST00000448971 GCGP01275 180 aa10.25□□□□□ -0.77
USP39-206ENST00000448971 UBE2G1P62253 170 aa10.25□□□□□ -0.77
USP39-206ENST00000448971 OR5I1Q13606 314 aa10.25□□□□□ -0.77
USP39-206ENST00000448971 SMUG1Q53HV7 270 aa10.25□□□□□ -0.77
USP39-206ENST00000448971 Q86TA4 180 aa10.25□□□□□ -0.77
USP39-206ENST00000448971 C15orf53Q8NAA6 179 aa10.25□□□□□ -0.77
USP39-206ENST00000448971 SDF2L1Q9HCN8 221 aa10.25□□□□□ -0.77
USP39-206ENST00000448971 ARL2-SNX15V9GYD0 113 aa10.25□□□□□ -0.77
USP39-206ENST00000448971 ABCA13Q86UQ4 5058 aa10.25□□□□□ -0.77
USP39-206ENST00000448971 PAGE4O60829 102 aa10.24□□□□□ -0.77
USP39-206ENST00000448971 IGLV2-11P01706 119 aa10.24□□□□□ -0.77
USP39-206ENST00000448971 AKR1C3P42330 323 aa10.24□□□□□ -0.77
USP39-206ENST00000448971 SAPCD1Q5SSQ6 148 aa10.24□□□□□ -0.77
USP39-206ENST00000448971 SLC51BQ86UW2 128 aa10.24□□□□□ -0.77
USP39-206ENST00000448971 MBD3L1Q8WWY6 194 aa10.24□□□□□ -0.77
USP39-206ENST00000448971 LINC00479Q96M42 142 aa10.24□□□□□ -0.77
USP39-206ENST00000448971 TCEAL7Q9BRU2 100 aa10.24□□□□□ -0.77
USP39-206ENST00000448971 EIF4EBP3O60516 100 aaPredicted RBP10.23□□□□□ -0.77
USP39-206ENST00000448971 SPINK4O60575 86 aa10.23□□□□□ -0.77
USP39-206ENST00000448971 NUDT3O95989 172 aa10.23□□□□□ -0.77
USP39-206ENST00000448971 PFN1P07737 140 aaKnown RBP10.23□□□□□ -0.77
USP39-206ENST00000448971 RAB5CP51148 216 aa10.23□□□□□ -0.77
USP39-206ENST00000448971 LINC00336Q6ZUF6 198 aa10.23□□□□□ -0.77
USP39-206ENST00000448971 C9orf62Q8N4C0 152 aa10.23□□□□□ -0.77
USP39-206ENST00000448971 KCNS1Q96KK3 526 aa10.23□□□□□ -0.77
USP39-206ENST00000448971 A0A1B0GVG6 124 aa10.22□□□□□ -0.77
USP39-206ENST00000448971 TEX46H3BTG2 121 aa10.22□□□□□ -0.77
USP39-206ENST00000448971 TYMSP04818 313 aa10.22□□□□□ -0.77
USP39-206ENST00000448971 ZNF80P51504 273 aaPredicted RBP10.22□□□□□ -0.77
USP39-206ENST00000448971 TDRG1Q3Y452 100 aa10.22□□□□□ -0.77
USP39-206ENST00000448971 FMC1Q96HJ9 113 aa10.22□□□□□ -0.77
USP39-206ENST00000448971 MDFICQ9P1T7 246 aa10.22□□□□□ -0.77
USP39-206ENST00000448971 TRAV26-1A0A087WT03 109 aa10.21□□□□□ -0.77
USP39-206ENST00000448971 A0A0J9YY99 117 aa10.21□□□□□ -0.77
USP39-206ENST00000448971 IGHV3-53P01767 116 aa10.21□□□□□ -0.77
USP39-206ENST00000448971 MED14OSP0DP75 135 aa10.21□□□□□ -0.77
USP39-206ENST00000448971 HOXA5P20719 270 aa10.21□□□□□ -0.77
USP39-206ENST00000448971 SULT1A2P50226 295 aa10.21□□□□□ -0.77
USP39-206ENST00000448971 LGALS9BQ3B8N2 356 aa10.21□□□□□ -0.77
USP39-206ENST00000448971 IGHV3-16A0A0C4DH30 117 aa10.2□□□□□ -0.78
USP39-206ENST00000448971 GNRH2O43555 120 aa10.2□□□□□ -0.78
USP39-206ENST00000448971 POM121L12Q8N7R1 296 aa10.2□□□□□ -0.78
USP39-206ENST00000448971 C18orf15Q96N68 181 aa10.2□□□□□ -0.78
USP39-206ENST00000448971 SPXQ9BT56 116 aa10.2□□□□□ -0.78
USP39-206ENST00000448971 MANBALQ9NQG1 85 aa10.2□□□□□ -0.78
USP39-206ENST00000448971 GNG13Q9P2W3 67 aa10.2□□□□□ -0.78
USP39-206ENST00000448971 SCO2A0A1W2PP80 73 aa10.19□□□□□ -0.78
USP39-206ENST00000448971 C11orf21Q9P2W6 132 aa10.18□□□□□ -0.78
USP39-206ENST00000448971 ZFP30Q9Y2G7 519 aa10.18□□□□□ -0.78
USP39-206ENST00000448971 M0R2P5 195 aa10.17□□□□□ -0.78
USP39-206ENST00000448971 RTL8CO15255 209 aa10.17□□□□□ -0.78
USP39-206ENST00000448971 LTAP01374 205 aa10.17□□□□□ -0.78
USP39-206ENST00000448971 IFNA1P01562 189 aa10.17□□□□□ -0.78
USP39-206ENST00000448971 NKX2-5P52952 324 aaPredicted RBP10.17□□□□□ -0.78
USP39-206ENST00000448971 ZC2HC1AQ96GY0 325 aa10.17□□□□□ -0.78
USP39-206ENST00000448971 TRAV1-1A0A0B4J248 108 aa10.16□□□□□ -0.78
USP39-206ENST00000448971 TRGV4A0A0C4DH28 118 aa10.16□□□□□ -0.78
USP39-206ENST00000448971 TRBV6-1A0A0K0K1D8 114 aa10.16□□□□□ -0.78
USP39-206ENST00000448971 FABP5P3A8MUU1 101 aa10.16□□□□□ -0.78
USP39-206ENST00000448971 SFTA3P0C7M3 94 aa10.16□□□□□ -0.78
USP39-206ENST00000448971 S100A4P26447 101 aaKnown RBP10.16□□□□□ -0.78
USP39-206ENST00000448971 CCL18P55774 89 aa10.16□□□□□ -0.78
USP39-206ENST00000448971 CCL20P78556 96 aa10.16□□□□□ -0.78
USP39-206ENST00000448971 RNF212Q495C1 297 aa10.16□□□□□ -0.78
USP39-206ENST00000448971 NHLRC2Q8NBF2 726 aa10.16□□□□□ -0.78
USP39-206ENST00000448971 RASL10AQ92737 203 aa10.16□□□□□ -0.78
USP39-206ENST00000448971 MRPL18Q9H0U6 180 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms