RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 C18orf65Q6ZTR6 163 aa7.93□□□□□ -1.14
VIPAS39-203ENST00000448935 DYNLRB2Q8TF09 96 aa7.93□□□□□ -1.14
VIPAS39-203ENST00000448935 ZFHX3Q15911 3703 aa7.93□□□□□ -1.14
VIPAS39-203ENST00000448935 IGKV3D-20A0A0C4DH25 116 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 A0A1B0GUS0 222 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 F6UB75 175 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 OR5AL1P0C617 328 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 ZNF688P0C7X2 276 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 TSPOP30536 169 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 CACNG7P62955 275 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 JOSD1Q15040 202 aaPredicted RBP7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 TWIST1Q15672 202 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 PYY3Q5JQD4 70 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 DLX4Q92988 240 aaPredicted RBP7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 NIT2Q9NQR4 276 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 MXRA5Q9NR99 2828 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 TRAV25A0A0B4J276 109 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 A0A0J9YX75 114 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 NUPR1O60356 82 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 CSN3P07498 182 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 MED14OSP0DP75 135 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 NTF3P20783 257 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 MALP21145 153 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 RIPPLY3P57055 190 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 LINC00310P59036 64 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 FHL3Q13643 280 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 FOXI2Q6ZQN5 318 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 SMIM15Q7Z3B0 74 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 TMEM191AQ9H0A3 160 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 C19orf73Q9NVV2 129 aa7.92□□□□□ -1.14
VIPAS39-203ENST00000448935 KLLNB2CW77 178 aa7.91□□□□□ -1.14
VIPAS39-203ENST00000448935 CCL24O00175 119 aa7.91□□□□□ -1.14
VIPAS39-203ENST00000448935 SNAI2O43623 268 aa7.91□□□□□ -1.14
VIPAS39-203ENST00000448935 ZNF324O75467 553 aaPredicted RBP7.91□□□□□ -1.14
VIPAS39-203ENST00000448935 HSBP1O75506 76 aa7.91□□□□□ -1.14
VIPAS39-203ENST00000448935 CD28P10747 220 aa7.91□□□□□ -1.14
VIPAS39-203ENST00000448935 RNASE4P34096 147 aaKnown RBP7.91□□□□□ -1.14
VIPAS39-203ENST00000448935 PRR9Q5T870 116 aa7.91□□□□□ -1.14
VIPAS39-203ENST00000448935 FAM104BQ5XKR9 115 aa7.91□□□□□ -1.14
VIPAS39-203ENST00000448935 ADAMTSL5Q6ZMM2 481 aa7.91□□□□□ -1.14
VIPAS39-203ENST00000448935 CHCHD1Q96BP2 118 aaKnown RBP7.91□□□□□ -1.14
VIPAS39-203ENST00000448935 SMR3AQ99954 134 aa7.91□□□□□ -1.14
VIPAS39-203ENST00000448935 SIGLEC8Q9NYZ4 499 aa7.91□□□□□ -1.14
VIPAS39-203ENST00000448935 C11orf21Q9P2W6 132 aa7.91□□□□□ -1.14
VIPAS39-203ENST00000448935 RNF114Q9Y508 228 aa7.91□□□□□ -1.14
VIPAS39-203ENST00000448935 J3KRW8 73 aa7.9□□□□□ -1.14
VIPAS39-203ENST00000448935 PPBPP02775 128 aa7.9□□□□□ -1.14
VIPAS39-203ENST00000448935 ASIPP42127 132 aa7.9□□□□□ -1.14
VIPAS39-203ENST00000448935 AMTP48728 403 aa7.9□□□□□ -1.14
VIPAS39-203ENST00000448935 S100A12P80511 92 aa7.9□□□□□ -1.14
VIPAS39-203ENST00000448935 ZNF575Q86XF7 245 aa7.9□□□□□ -1.14
VIPAS39-203ENST00000448935 ORMDL3Q8N138 153 aa7.9□□□□□ -1.14
VIPAS39-203ENST00000448935 RCHY1Q96PM5 261 aa7.9□□□□□ -1.14
VIPAS39-203ENST00000448935 SELENOKQ9Y6D0 94 aa7.9□□□□□ -1.14
VIPAS39-203ENST00000448935 C2CD3Q4AC94 2353 aa7.9□□□□□ -1.15
VIPAS39-203ENST00000448935 IGHV4-4A0A075B6R2 117 aa7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 OR4C46A6NHA9 309 aa7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 TCF21O43680 179 aa7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 RAB4AP20338 218 aa7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 PMCHP20382 165 aa7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 S100A4P26447 101 aaKnown RBP7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 DEFB1P60022 68 aa7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 IQCJQ1A5X6 159 aa7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 DEFB114Q30KQ6 69 aa7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 SPANXN1Q5VSR9 72 aa7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 FAM159AQ6UWV7 190 aa7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 DUX3Q96PT4 197 aa7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 SPAG8Q99932 426 aaPredicted RBP7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 CITED2Q99967 270 aaPredicted RBP7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 NAGKQ9UJ70 344 aa7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 TLN2Q9Y4G6 2542 aa7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 A0A1W2PRX2 142 aa7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 C7orf71A4D174 169 aa7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 CDKN1BP46527 198 aa7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 RNASEKQ6P5S7 137 aaKnown RBP7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 NIT1Q86X76 327 aa7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 TMEM61Q8N0U2 210 aa7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 LAMTOR2Q9Y2Q5 125 aa7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 U3KQK5 164 aa7.89□□□□□ -1.15
VIPAS39-203ENST00000448935 LINC00614P0C842 121 aa7.88□□□□□ -1.15
VIPAS39-203ENST00000448935 CKS2P33552 79 aa7.88□□□□□ -1.15
VIPAS39-203ENST00000448935 PROK1P58294 105 aa7.88□□□□□ -1.15
VIPAS39-203ENST00000448935 SSTP61278 116 aa7.88□□□□□ -1.15
VIPAS39-203ENST00000448935 ANXA2RQ3ZCQ2 193 aa7.88□□□□□ -1.15
VIPAS39-203ENST00000448935 AMN1Q8IY45 258 aa7.88□□□□□ -1.15
VIPAS39-203ENST00000448935 C11orf44Q8N8P7 122 aa7.88□□□□□ -1.15
VIPAS39-203ENST00000448935 PRELID3AQ96N28 172 aa7.88□□□□□ -1.15
VIPAS39-203ENST00000448935 SONP18583 2426 aaKnown RBP7.87□□□□□ -1.15
VIPAS39-203ENST00000448935 MUC21A0A0G2JKD1 596 aa7.87□□□□□ -1.15
VIPAS39-203ENST00000448935 MUC21A0A140T8X8 626 aa7.87□□□□□ -1.15
VIPAS39-203ENST00000448935 D6R8Y8 96 aa7.87□□□□□ -1.15
VIPAS39-203ENST00000448935 H3BVH4 76 aa7.87□□□□□ -1.15
VIPAS39-203ENST00000448935 M0R2Z0 102 aa7.87□□□□□ -1.15
VIPAS39-203ENST00000448935 CMC4P56277 68 aaPredicted RBP7.87□□□□□ -1.15
VIPAS39-203ENST00000448935 MRPL51Q4U2R6 128 aaKnown RBP7.87□□□□□ -1.15
VIPAS39-203ENST00000448935 MUC21Q5SSG8 566 aa7.87□□□□□ -1.15
VIPAS39-203ENST00000448935 SETD2Q9BYW2 2564 aaPredicted RBP7.86□□□□□ -1.15
VIPAS39-203ENST00000448935 A8MTW9 85 aa7.86□□□□□ -1.15
VIPAS39-203ENST00000448935 INAFM1C9JVW0 142 aa7.86□□□□□ -1.15
VIPAS39-203ENST00000448935 SCGB1D1O95968 90 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms