RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 FFAR4Q5NUL3 377 aa8.96□□□□□ -0.98
HMGB3-204ENST00000448905 PRADC1Q9BSG0 188 aa8.96□□□□□ -0.98
HMGB3-204ENST00000448905 SDF2L1Q9HCN8 221 aa8.96□□□□□ -0.98
HMGB3-204ENST00000448905 OTORQ9NRC9 128 aa8.96□□□□□ -0.98
HMGB3-204ENST00000448905 MBD2Q9UBB5 411 aa8.96□□□□□ -0.98
HMGB3-204ENST00000448905 IGHV3-16A0A0C4DH30 117 aa8.95□□□□□ -0.98
HMGB3-204ENST00000448905 A0A1W2PPV4 95 aa8.95□□□□□ -0.98
HMGB3-204ENST00000448905 IBA57-AS1B1ANH7 110 aa8.95□□□□□ -0.98
HMGB3-204ENST00000448905 SIX6O95475 246 aa8.95□□□□□ -0.98
HMGB3-204ENST00000448905 LINC01556Q5JQF7 62 aa8.95□□□□□ -0.98
HMGB3-204ENST00000448905 OR10J3Q5JRS4 329 aa8.95□□□□□ -0.98
HMGB3-204ENST00000448905 TREM1Q9NP99 234 aa8.95□□□□□ -0.98
HMGB3-204ENST00000448905 OR5AC2Q9NZP5 309 aa8.95□□□□□ -0.98
HMGB3-204ENST00000448905 FBLL1A6NHQ2 334 aaKnown RBP8.94□□□□□ -0.98
HMGB3-204ENST00000448905 PET100P0DJ07 73 aa8.94□□□□□ -0.98
HMGB3-204ENST00000448905 Q6ZSN1 163 aa8.94□□□□□ -0.98
HMGB3-204ENST00000448905 ENKURQ8TC29 256 aa8.94□□□□□ -0.98
HMGB3-204ENST00000448905 NDFIP1Q9BT67 221 aa8.94□□□□□ -0.98
HMGB3-204ENST00000448905 TM2D2Q9BX73 214 aa8.94□□□□□ -0.98
HMGB3-204ENST00000448905 RPH3ALQ9UNE2 315 aa8.94□□□□□ -0.98
HMGB3-204ENST00000448905 FAT1Q14517 4588 aa8.93□□□□□ -0.98
HMGB3-204ENST00000448905 LRCOL1A6NCL2 159 aa8.93□□□□□ -0.98
HMGB3-204ENST00000448905 GATA1P15976 413 aaPredicted RBP8.93□□□□□ -0.98
HMGB3-204ENST00000448905 ZNF876PQ49A33 203 aa8.93□□□□□ -0.98
HMGB3-204ENST00000448905 PQLC2Q6ZP29 291 aa8.93□□□□□ -0.98
HMGB3-204ENST00000448905 LINC00299Q6ZSB3 139 aa8.93□□□□□ -0.98
HMGB3-204ENST00000448905 GOLT1AQ6ZVE7 132 aa8.93□□□□□ -0.98
HMGB3-204ENST00000448905 Q8N814 137 aa8.93□□□□□ -0.98
HMGB3-204ENST00000448905 S100ZQ8WXG8 99 aa8.93□□□□□ -0.98
HMGB3-204ENST00000448905 ASB13Q8WXK3 278 aa8.93□□□□□ -0.98
HMGB3-204ENST00000448905 LOC100131303A0A0U1RQF7 123 aa8.92□□□□□ -0.98
HMGB3-204ENST00000448905 TRBV6-4A0A1B0GX49 114 aa8.92□□□□□ -0.98
HMGB3-204ENST00000448905 H0YIZ8 118 aa8.92□□□□□ -0.98
HMGB3-204ENST00000448905 J3QL48 77 aa8.92□□□□□ -0.98
HMGB3-204ENST00000448905 K7EQM0 130 aa8.92□□□□□ -0.98
HMGB3-204ENST00000448905 TAAR5O14804 337 aa8.92□□□□□ -0.98
HMGB3-204ENST00000448905 C1QBP02746 253 aa8.92□□□□□ -0.98
HMGB3-204ENST00000448905 ASAH1Q13510 395 aa8.92□□□□□ -0.98
HMGB3-204ENST00000448905 ACOT6Q3I5F7 207 aaPredicted RBP8.92□□□□□ -0.98
HMGB3-204ENST00000448905 SLC25A29Q8N8R3 303 aa8.92□□□□□ -0.98
HMGB3-204ENST00000448905 Q9HAA7 133 aa8.92□□□□□ -0.98
HMGB3-204ENST00000448905 SERTM2A0A1B0GWG4 89 aa8.91□□□□□ -0.98
HMGB3-204ENST00000448905 RPL12P30050 165 aaKnown RBP8.91□□□□□ -0.98
HMGB3-204ENST00000448905 RHOHQ15669 191 aa8.91□□□□□ -0.98
HMGB3-204ENST00000448905 LELP1Q5T871 98 aa8.91□□□□□ -0.98
HMGB3-204ENST00000448905 PPP1R1CQ8WVI7 109 aa8.91□□□□□ -0.98
HMGB3-204ENST00000448905 IGHV3-30P01768 117 aa8.9□□□□□ -0.98
HMGB3-204ENST00000448905 IGHV3-33P01772 117 aa8.9□□□□□ -0.98
HMGB3-204ENST00000448905 PLA2G1BP04054 148 aaKnown RBP8.9□□□□□ -0.98
HMGB3-204ENST00000448905 TYMSP04818 313 aa8.9□□□□□ -0.98
HMGB3-204ENST00000448905 IGHV3-30-3P0DP02 117 aa8.9□□□□□ -0.98
HMGB3-204ENST00000448905 IGHV3-30-5P0DP03 117 aa8.9□□□□□ -0.98
HMGB3-204ENST00000448905 ATP6V0E2Q8NHE4 81 aa8.9□□□□□ -0.98
HMGB3-204ENST00000448905 GTSF1LQ9H1H1 148 aa8.9□□□□□ -0.98
HMGB3-204ENST00000448905 HSPB11Q9Y547 144 aa8.9□□□□□ -0.98
HMGB3-204ENST00000448905 TRAV8-3A0A0A6YYJ7 113 aa8.89□□□□□ -0.99
HMGB3-204ENST00000448905 F6UZH7 168 aa8.89□□□□□ -0.99
HMGB3-204ENST00000448905 INMT-MINDY4F8WBC2 141 aa8.89□□□□□ -0.99
HMGB3-204ENST00000448905 RS1O15537 224 aa8.89□□□□□ -0.99
HMGB3-204ENST00000448905 SSNA1O43805 119 aa8.89□□□□□ -0.99
HMGB3-204ENST00000448905 MGST1P10620 155 aaKnown RBP8.89□□□□□ -0.99
HMGB3-204ENST00000448905 HAMPP81172 84 aa8.89□□□□□ -0.99
HMGB3-204ENST00000448905 LAGE3Q14657 143 aa8.89□□□□□ -0.99
HMGB3-204ENST00000448905 TOR2AQ5JU69 321 aa8.89□□□□□ -0.99
HMGB3-204ENST00000448905 CFAP126Q5VTH2 177 aa8.89□□□□□ -0.99
HMGB3-204ENST00000448905 SMIM3Q9BZL3 60 aa8.89□□□□□ -0.99
HMGB3-204ENST00000448905 IGHV3-73A0A0B4J1V6 119 aa8.88□□□□□ -0.99
HMGB3-204ENST00000448905 MPC2O95563 127 aa8.88□□□□□ -0.99
HMGB3-204ENST00000448905 ZFP69Q49AA0 526 aa8.88□□□□□ -0.99
HMGB3-204ENST00000448905 OR10G9Q8NGN4 311 aa8.88□□□□□ -0.99
HMGB3-204ENST00000448905 OR10G7Q8NGN6 311 aa8.88□□□□□ -0.99
HMGB3-204ENST00000448905 PTH2Q96A98 100 aa8.88□□□□□ -0.99
HMGB3-204ENST00000448905 TVP23CQ96ET8 276 aa8.88□□□□□ -0.99
HMGB3-204ENST00000448905 COX11Q9Y6N1 276 aa8.88□□□□□ -0.99
HMGB3-204ENST00000448905 TRAV8-1A0A0A6YYK1 113 aa8.87□□□□□ -0.99
HMGB3-204ENST00000448905 H2BFSP57053 126 aa8.87□□□□□ -0.99
HMGB3-204ENST00000448905 A0A087WWC5 75 aa8.86□□□□□ -0.99
HMGB3-204ENST00000448905 SEC11BP0C7V7 166 aa8.86□□□□□ -0.99
HMGB3-204ENST00000448905 SMUG1Q53HV7 270 aa8.86□□□□□ -0.99
HMGB3-204ENST00000448905 SAPCD1Q5SSQ6 148 aa8.86□□□□□ -0.99
HMGB3-204ENST00000448905 GGTLC3B5MD39 225 aa8.85□□□□□ -0.99
HMGB3-204ENST00000448905 EIF3GO75821 320 aaKnown RBP eCLIP8.85□□□□□ -0.99
HMGB3-204ENST00000448905 UPK1BO75841 260 aa8.85□□□□□ -0.99
HMGB3-204ENST00000448905 GCGP01275 180 aa8.85□□□□□ -0.99
HMGB3-204ENST00000448905 TCRAP04437 139 aa8.85□□□□□ -0.99
HMGB3-204ENST00000448905 S100A4P26447 101 aaKnown RBP8.85□□□□□ -0.99
HMGB3-204ENST00000448905 FGF8P55075 233 aaPredicted RBP8.85□□□□□ -0.99
HMGB3-204ENST00000448905 GNG5P63218 68 aa8.85□□□□□ -0.99
HMGB3-204ENST00000448905 C5orf17Q8NAS9 161 aa8.85□□□□□ -0.99
HMGB3-204ENST00000448905 DEFB104AQ8WTQ1 72 aa8.85□□□□□ -0.99
HMGB3-204ENST00000448905 RMI2Q96E14 147 aa8.85□□□□□ -0.99
HMGB3-204ENST00000448905 SGK494Q96LW2 274 aa8.85□□□□□ -0.99
HMGB3-204ENST00000448905 MARVELD1Q9BSK0 173 aa8.85□□□□□ -0.99
HMGB3-204ENST00000448905 PSG8Q9UQ74 426 aa8.85□□□□□ -0.99
HMGB3-204ENST00000448905 URGCP-MRPS24S4R325 110 aa8.85□□□□□ -0.99
HMGB3-204ENST00000448905 VPS13BQ7Z7G8 4022 aa8.84□□□□□ -0.99
HMGB3-204ENST00000448905 PGPEP1LA6NFU8 196 aa8.84□□□□□ -0.99
HMGB3-204ENST00000448905 A8MWV9 139 aa8.84□□□□□ -0.99
HMGB3-204ENST00000448905 HMGB3O15347 200 aaKnown RBP8.84□□□□□ -0.99
HMGB3-204ENST00000448905 MBP02144 154 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 198.3 ms