RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 PRELID3AQ96N28 172 aa11.28□□□□□ -0.6
SF1-211ENST00000448404 A0A096LNJ9 63 aa11.28□□□□□ -0.6
SF1-211ENST00000448404 A6NDX4 124 aa11.28□□□□□ -0.6
SF1-211ENST00000448404 FAM104BQ5XKR9 115 aa11.28□□□□□ -0.6
SF1-211ENST00000448404 SLC25A34Q6PIV7 304 aa11.28□□□□□ -0.6
SF1-211ENST00000448404 AP5S1Q9NUS5 200 aa11.28□□□□□ -0.6
SF1-211ENST00000448404 PSMG3-AS1Q96PY0 264 aa11.28□□□□□ -0.6
SF1-211ENST00000448404 CHTOPQ9Y3Y2 248 aaKnown RBP11.28□□□□□ -0.6
SF1-211ENST00000448404 ITPR2Q14571 2701 aa11.27□□□□□ -0.6
SF1-211ENST00000448404 NOTCH2Q04721 2471 aa11.27□□□□□ -0.61
SF1-211ENST00000448404 FABP5P3A8MUU1 101 aa11.27□□□□□ -0.61
SF1-211ENST00000448404 CIDEAO60543 219 aa11.27□□□□□ -0.61
SF1-211ENST00000448404 CKS2P33552 79 aa11.27□□□□□ -0.61
SF1-211ENST00000448404 FA2HQ7L5A8 372 aa11.27□□□□□ -0.61
SF1-211ENST00000448404 C18orf15Q96N68 181 aa11.27□□□□□ -0.61
SF1-211ENST00000448404 IGLC6P0CF74 106 aa11.26□□□□□ -0.61
SF1-211ENST00000448404 RPS20P60866 119 aaKnown RBP11.26□□□□□ -0.61
SF1-211ENST00000448404 ST20Q9HBF5 79 aa11.26□□□□□ -0.61
SF1-211ENST00000448404 IGHG2P01859 326 aa11.26□□□□□ -0.61
SF1-211ENST00000448404 TMEM78Q5T7P6 136 aa11.26□□□□□ -0.61
SF1-211ENST00000448404 C12orf54Q6X4T0 127 aa11.26□□□□□ -0.61
SF1-211ENST00000448404 UFC1Q9Y3C8 167 aa11.25□□□□□ -0.61
SF1-211ENST00000448404 B4DSR2 109 aa11.25□□□□□ -0.61
SF1-211ENST00000448404 HSBP1L1C9JCN9 74 aa11.25□□□□□ -0.61
SF1-211ENST00000448404 NAA38Q9BRA0 125 aaKnown RBP11.25□□□□□ -0.61
SF1-211ENST00000448404 U3KQE9 123 aa11.25□□□□□ -0.61
SF1-211ENST00000448404 GAGE10A6NGK3 116 aa11.24□□□□□ -0.61
SF1-211ENST00000448404 H3BVH4 76 aa11.24□□□□□ -0.61
SF1-211ENST00000448404 IGKV3-20P01619 116 aa11.24□□□□□ -0.61
SF1-211ENST00000448404 CHCHD1Q96BP2 118 aaKnown RBP11.24□□□□□ -0.61
SF1-211ENST00000448404 RNF185Q96GF1 192 aa11.24□□□□□ -0.61
SF1-211ENST00000448404 HELZ2Q9BYK8 2649 aaKnown RBP11.24□□□□□ -0.61
SF1-211ENST00000448404 BMI1P35226 326 aa11.24□□□□□ -0.61
SF1-211ENST00000448404 RAB9AP51151 201 aa11.24□□□□□ -0.61
SF1-211ENST00000448404 HIST1H1AQ02539 215 aaPredicted RBP11.24□□□□□ -0.61
SF1-211ENST00000448404 C7orf71A4D174 169 aa11.23□□□□□ -0.61
SF1-211ENST00000448404 CD5LO43866 347 aa11.23□□□□□ -0.61
SF1-211ENST00000448404 ORMDL3Q8N138 153 aa11.23□□□□□ -0.61
SF1-211ENST00000448404 RHPN1-AS1Q9BWJ2 59 aa11.23□□□□□ -0.61
SF1-211ENST00000448404 BEX4Q9NWD9 120 aaPredicted RBP11.23□□□□□ -0.61
SF1-211ENST00000448404 OR5AL1P0C617 328 aa11.23□□□□□ -0.61
SF1-211ENST00000448404 ZNF493Q6ZR52 646 aa11.23□□□□□ -0.61
SF1-211ENST00000448404 PEF1Q9UBV8 284 aaKnown RBP11.23□□□□□ -0.61
SF1-211ENST00000448404 FAM223BA6NKX1 122 aa11.22□□□□□ -0.61
SF1-211ENST00000448404 NDUFS8O00217 210 aa11.22□□□□□ -0.61
SF1-211ENST00000448404 FAM223AQ8IWN6 122 aa11.22□□□□□ -0.61
SF1-211ENST00000448404 SLC50A1Q9BRV3 221 aa11.22□□□□□ -0.61
SF1-211ENST00000448404 ZNF747Q9BV97 191 aa11.22□□□□□ -0.61
SF1-211ENST00000448404 ZNF843Q8N446 348 aa11.22□□□□□ -0.61
SF1-211ENST00000448404 NPFFR1Q9GZQ6 430 aa11.22□□□□□ -0.61
SF1-211ENST00000448404 MAP1LC3CQ9BXW4 147 aa11.22□□□□□ -0.61
SF1-211ENST00000448404 SCRT2Q9NQ03 307 aa11.22□□□□□ -0.61
SF1-211ENST00000448404 JMJD1CQ15652 2540 aa11.22□□□□□ -0.61
SF1-211ENST00000448404 TMEM8BA6NDV4 472 aa11.21□□□□□ -0.61
SF1-211ENST00000448404 M0R381 172 aa11.21□□□□□ -0.61
SF1-211ENST00000448404 RNASE4P34096 147 aaKnown RBP11.21□□□□□ -0.62
SF1-211ENST00000448404 Q6AWC8 147 aa11.21□□□□□ -0.62
SF1-211ENST00000448404 C18orf65Q6ZTR6 163 aa11.21□□□□□ -0.62
SF1-211ENST00000448404 TMEM191AQ9H0A3 160 aa11.21□□□□□ -0.62
SF1-211ENST00000448404 IGHV7-4-1A0A0J9YVY3 117 aa11.2□□□□□ -0.62
SF1-211ENST00000448404 CRXO43186 299 aaPredicted RBP11.2□□□□□ -0.62
SF1-211ENST00000448404 GNRH2O43555 120 aa11.2□□□□□ -0.62
SF1-211ENST00000448404 KLK9Q2XQG4 91 aa11.2□□□□□ -0.62
SF1-211ENST00000448404 COX8CQ7Z4L0 72 aa11.2□□□□□ -0.62
SF1-211ENST00000448404 DUX3Q96PT4 197 aa11.2□□□□□ -0.62
SF1-211ENST00000448404 KLK9Q9UKQ9 250 aa11.2□□□□□ -0.62
SF1-211ENST00000448404 DEFB136Q30KP8 78 aa11.2□□□□□ -0.62
SF1-211ENST00000448404 A0A096LNT2 108 aa11.19□□□□□ -0.62
SF1-211ENST00000448404 COX6B1P14854 86 aa11.19□□□□□ -0.62
SF1-211ENST00000448404 CACNG7P62955 275 aa11.19□□□□□ -0.62
SF1-211ENST00000448404 LINC01559Q495D7 138 aa11.19□□□□□ -0.62
SF1-211ENST00000448404 SVIPQ8NHG7 77 aa11.19□□□□□ -0.62
SF1-211ENST00000448404 G3V4G9 280 aa11.18□□□□□ -0.62
SF1-211ENST00000448404 NDUFA4O00483 81 aa11.18□□□□□ -0.62
SF1-211ENST00000448404 ZFAND2AQ8N6M9 145 aa11.18□□□□□ -0.62
SF1-211ENST00000448404 GATD1Q8NB37 220 aa11.18□□□□□ -0.62
SF1-211ENST00000448404 OR1N2Q8NGR9 330 aa11.18□□□□□ -0.62
SF1-211ENST00000448404 AP1S3Q96PC3 154 aa11.18□□□□□ -0.62
SF1-211ENST00000448404 PRSS47A8MTI9 375 aa11.18□□□□□ -0.62
SF1-211ENST00000448404 SOCS3O14543 225 aa11.18□□□□□ -0.62
SF1-211ENST00000448404 IGLV1-40P01703 118 aa11.18□□□□□ -0.62
SF1-211ENST00000448404 SPANXN1Q5VSR9 72 aa11.18□□□□□ -0.62
SF1-211ENST00000448404 TMEM190Q8WZ59 177 aa11.18□□□□□ -0.62
SF1-211ENST00000448404 U3KQK5 164 aa11.18□□□□□ -0.62
SF1-211ENST00000448404 H3BUT2 72 aa11.17□□□□□ -0.62
SF1-211ENST00000448404 TNFRSF6BO95407 300 aa11.17□□□□□ -0.62
SF1-211ENST00000448404 ZNF688P0C7X2 276 aa11.17□□□□□ -0.62
SF1-211ENST00000448404 C9orf47Q6ZRZ4 202 aa11.17□□□□□ -0.62
SF1-211ENST00000448404 DKK2Q9UBU2 259 aa11.17□□□□□ -0.62
SF1-211ENST00000448404 FBLL1A6NHQ2 334 aaKnown RBP11.17□□□□□ -0.62
SF1-211ENST00000448404 LINC01356Q8N9X3 169 aa11.17□□□□□ -0.62
SF1-211ENST00000448404 JMJD8Q96S16 334 aa11.17□□□□□ -0.62
SF1-211ENST00000448404 HECTD1Q9ULT8 2610 aa11.17□□□□□ -0.62
SF1-211ENST00000448404 CR1P17927 2039 aa11.17□□□□□ -0.62
SF1-211ENST00000448404 TRAV12-2A0A075B6T6 113 aa11.16□□□□□ -0.62
SF1-211ENST00000448404 CRIP2P52943 208 aaPredicted RBP11.16□□□□□ -0.62
SF1-211ENST00000448404 SYNJ2BPP57105 145 aa11.16□□□□□ -0.62
SF1-211ENST00000448404 ANXA2RQ3ZCQ2 193 aa11.16□□□□□ -0.62
SF1-211ENST00000448404 C2orf91Q6ZV80 131 aa11.16□□□□□ -0.62
SF1-211ENST00000448404 RAB37Q96AX2 223 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms