RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 GOLT1AQ6ZVE7 132 aa7.62□□□□□ -1.19
NPIPB3-202ENST00000448012 IQCF2Q8IXL9 164 aa7.62□□□□□ -1.19
NPIPB3-202ENST00000448012 TMEM183AQ8IXX5 376 aa7.62□□□□□ -1.19
NPIPB3-202ENST00000448012 KCNS1Q96KK3 526 aa7.62□□□□□ -1.19
NPIPB3-202ENST00000448012 PSMG3Q9BT73 122 aaPredicted RBP7.62□□□□□ -1.19
NPIPB3-202ENST00000448012 UPK3BQ9BT76 320 aa7.62□□□□□ -1.19
NPIPB3-202ENST00000448012 TREM1Q9NP99 234 aa7.62□□□□□ -1.19
NPIPB3-202ENST00000448012 TP53TG3Q9ULZ0 132 aa7.62□□□□□ -1.19
NPIPB3-202ENST00000448012 DNAH10Q8IVF4 4471 aa7.61□□□□□ -1.19
NPIPB3-202ENST00000448012 HMGB3O15347 200 aaKnown RBP7.61□□□□□ -1.19
NPIPB3-202ENST00000448012 EIF3GO75821 320 aaKnown RBP eCLIP7.61□□□□□ -1.19
NPIPB3-202ENST00000448012 ARL14EPLP0DKL9 152 aa7.61□□□□□ -1.19
NPIPB3-202ENST00000448012 BTF3P20290 206 aaKnown RBP7.61□□□□□ -1.19
NPIPB3-202ENST00000448012 SERF2P84101 59 aa7.61□□□□□ -1.19
NPIPB3-202ENST00000448012 Q6AWC8 147 aa7.61□□□□□ -1.19
NPIPB3-202ENST00000448012 ACTR3CQ9C0K3 210 aaPredicted RBP7.61□□□□□ -1.19
NPIPB3-202ENST00000448012 SDF2L1Q9HCN8 221 aa7.61□□□□□ -1.19
NPIPB3-202ENST00000448012 TMEM167BQ9NRX6 74 aa7.61□□□□□ -1.19
NPIPB3-202ENST00000448012 HHLA3Q9XRX5 114 aa7.61□□□□□ -1.19
NPIPB3-202ENST00000448012 TRAV9-2A0A087WT02 112 aa7.6□□□□□ -1.19
NPIPB3-202ENST00000448012 A0A096LPF7 62 aa7.6□□□□□ -1.19
NPIPB3-202ENST00000448012 LCE2BO14633 110 aa7.6□□□□□ -1.19
NPIPB3-202ENST00000448012 CXorf1O96002 111 aa7.6□□□□□ -1.19
NPIPB3-202ENST00000448012 SEC11BP0C7V7 166 aa7.6□□□□□ -1.19
NPIPB3-202ENST00000448012 ATP6V0CP27449 155 aa7.6□□□□□ -1.19
NPIPB3-202ENST00000448012 SRIP30626 198 aa7.6□□□□□ -1.19
NPIPB3-202ENST00000448012 SULT1A2P50226 295 aa7.6□□□□□ -1.19
NPIPB3-202ENST00000448012 NEGR1Q7Z3B1 354 aa7.6□□□□□ -1.19
NPIPB3-202ENST00000448012 C5orf17Q8NAS9 161 aa7.6□□□□□ -1.19
NPIPB3-202ENST00000448012 OR2G3Q8NGZ4 309 aa7.6□□□□□ -1.19
NPIPB3-202ENST00000448012 RAB24Q969Q5 203 aa7.6□□□□□ -1.19
NPIPB3-202ENST00000448012 VSIG2Q96IQ7 327 aa7.6□□□□□ -1.19
NPIPB3-202ENST00000448012 C8orf49Q96NF6 230 aa7.6□□□□□ -1.19
NPIPB3-202ENST00000448012 DNAH6Q9C0G6 4158 aa7.6□□□□□ -1.19
NPIPB3-202ENST00000448012 FBLL1A6NHQ2 334 aaKnown RBP7.59□□□□□ -1.19
NPIPB3-202ENST00000448012 C16orf90A8MZG2 172 aa7.59□□□□□ -1.19
NPIPB3-202ENST00000448012 F6UZH7 168 aa7.59□□□□□ -1.19
NPIPB3-202ENST00000448012 SIVA1O15304 175 aa7.59□□□□□ -1.19
NPIPB3-202ENST00000448012 ORM1P02763 201 aa7.59□□□□□ -1.19
NPIPB3-202ENST00000448012 STAG3L2P0CL84 134 aa7.59□□□□□ -1.19
NPIPB3-202ENST00000448012 STAG3L3P0CL85 134 aa7.59□□□□□ -1.19
NPIPB3-202ENST00000448012 GCHFRP30047 84 aa7.59□□□□□ -1.19
NPIPB3-202ENST00000448012 BLOC1S1P78537 153 aa7.59□□□□□ -1.19
NPIPB3-202ENST00000448012 OR4C5Q8NGB2 326 aa7.59□□□□□ -1.19
NPIPB3-202ENST00000448012 TXNDC17Q9BRA2 123 aa7.59□□□□□ -1.19
NPIPB3-202ENST00000448012 MDFICQ9P1T7 246 aa7.59□□□□□ -1.19
NPIPB3-202ENST00000448012 TMA7Q9Y2S6 64 aaKnown RBP7.59□□□□□ -1.19
NPIPB3-202ENST00000448012 C9JCJ5 164 aa7.58□□□□□ -1.2
NPIPB3-202ENST00000448012 M0R2P5 195 aa7.58□□□□□ -1.2
NPIPB3-202ENST00000448012 EREGO14944 169 aa7.58□□□□□ -1.2
NPIPB3-202ENST00000448012 PPT1P50897 306 aa7.58□□□□□ -1.2
NPIPB3-202ENST00000448012 RAB5CP51148 216 aa7.58□□□□□ -1.2
NPIPB3-202ENST00000448012 CRYBA4P53673 196 aa7.58□□□□□ -1.2
NPIPB3-202ENST00000448012 GNG5P63218 68 aa7.58□□□□□ -1.2
NPIPB3-202ENST00000448012 TNP2Q05952 138 aa7.58□□□□□ -1.2
NPIPB3-202ENST00000448012 TDRG1Q3Y452 100 aa7.58□□□□□ -1.2
NPIPB3-202ENST00000448012 TOR2AQ5JU69 321 aa7.58□□□□□ -1.2
NPIPB3-202ENST00000448012 AKR1C8PQ5T2L2 129 aa7.58□□□□□ -1.2
NPIPB3-202ENST00000448012 Q6ZQT7 251 aa7.58□□□□□ -1.2
NPIPB3-202ENST00000448012 RASL10AQ92737 203 aa7.58□□□□□ -1.2
NPIPB3-202ENST00000448012 TRAV8-1A0A0A6YYK1 113 aa7.57□□□□□ -1.2
NPIPB3-202ENST00000448012 TRAV4A0A0B4J268 109 aa7.57□□□□□ -1.2
NPIPB3-202ENST00000448012 NXPH4O95158 308 aa7.57□□□□□ -1.2
NPIPB3-202ENST00000448012 TCRAP04437 139 aa7.57□□□□□ -1.2
NPIPB3-202ENST00000448012 SUMO1P63165 101 aaKnown RBP7.57□□□□□ -1.2
NPIPB3-202ENST00000448012 FHL2Q14192 279 aa7.57□□□□□ -1.2
NPIPB3-202ENST00000448012 SMUG1Q53HV7 270 aa7.57□□□□□ -1.2
NPIPB3-202ENST00000448012 SAPCD1Q5SSQ6 148 aa7.57□□□□□ -1.2
NPIPB3-202ENST00000448012 SH2D6Q7Z4S9 175 aa7.57□□□□□ -1.2
NPIPB3-202ENST00000448012 CYB561D1Q8N8Q1 229 aa7.57□□□□□ -1.2
NPIPB3-202ENST00000448012 RAB19A4D1S5 217 aa7.56□□□□□ -1.2
NPIPB3-202ENST00000448012 UMAD1C9J7I0 102 aa7.56□□□□□ -1.2
NPIPB3-202ENST00000448012 GNRH2O43555 120 aa7.56□□□□□ -1.2
NPIPB3-202ENST00000448012 SFTA3P0C7M3 94 aa7.56□□□□□ -1.2
NPIPB3-202ENST00000448012 FLI1Q01543 452 aaPredicted RBP7.56□□□□□ -1.2
NPIPB3-202ENST00000448012 PRNTQ86SH4 94 aa7.56□□□□□ -1.2
NPIPB3-202ENST00000448012 NFE4Q86UQ8 179 aa7.56□□□□□ -1.2
NPIPB3-202ENST00000448012 ZNF575Q86XF7 245 aa7.56□□□□□ -1.2
NPIPB3-202ENST00000448012 ZNF479Q96JC4 524 aa7.56□□□□□ -1.2
NPIPB3-202ENST00000448012 SH3BGRL3Q9H299 93 aa7.56□□□□□ -1.2
NPIPB3-202ENST00000448012 EPDR1Q9UM22 224 aa7.56□□□□□ -1.2
NPIPB3-202ENST00000448012 PSG8Q9UQ74 426 aa7.56□□□□□ -1.2
NPIPB3-202ENST00000448012 IGHV3-16A0A0C4DH30 117 aa7.55□□□□□ -1.2
NPIPB3-202ENST00000448012 CTXND1A0A1B0GTU2 59 aa7.55□□□□□ -1.2
NPIPB3-202ENST00000448012 A0A1W2PRE2 83 aa7.55□□□□□ -1.2
NPIPB3-202ENST00000448012 CIDEAO60543 219 aa7.55□□□□□ -1.2
NPIPB3-202ENST00000448012 GCGP01275 180 aa7.55□□□□□ -1.2
NPIPB3-202ENST00000448012 TYMSP04818 313 aa7.55□□□□□ -1.2
NPIPB3-202ENST00000448012 GYPEP15421 78 aa7.55□□□□□ -1.2
NPIPB3-202ENST00000448012 EVI2AP22794 236 aa7.55□□□□□ -1.2
NPIPB3-202ENST00000448012 UQCC3Q6UW78 93 aa7.55□□□□□ -1.2
NPIPB3-202ENST00000448012 DPPA3Q6W0C5 159 aa7.55□□□□□ -1.2
NPIPB3-202ENST00000448012 NHLRC2Q8NBF2 726 aa7.55□□□□□ -1.2
NPIPB3-202ENST00000448012 SGK494Q96LW2 274 aa7.55□□□□□ -1.2
NPIPB3-202ENST00000448012 NKX6-2Q9C056 277 aaPredicted RBP7.55□□□□□ -1.2
NPIPB3-202ENST00000448012 LY96Q9Y6Y9 160 aa7.55□□□□□ -1.2
NPIPB3-202ENST00000448012 FRAS1Q86XX4 4008 aa7.54□□□□□ -1.2
NPIPB3-202ENST00000448012 KRBOX1C9JBD0 128 aa7.54□□□□□ -1.2
NPIPB3-202ENST00000448012 TEX46H3BTG2 121 aa7.54□□□□□ -1.2
NPIPB3-202ENST00000448012 K7EP13 123 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms