RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 LINC01559Q495D7 138 aa18.28■□□□□ 0.52
RFFL-206ENST00000447669 C7orf71A4D174 169 aa18.28■□□□□ 0.52
RFFL-206ENST00000447669 ZNF324O75467 553 aaPredicted RBP18.28■□□□□ 0.52
RFFL-206ENST00000447669 TRPT1Q86TN4 253 aaKnown RBP18.28■□□□□ 0.52
RFFL-206ENST00000447669 SPRY2O43597 315 aa18.27■□□□□ 0.52
RFFL-206ENST00000447669 RPL35AP18077 110 aaKnown RBP18.27■□□□□ 0.52
RFFL-206ENST00000447669 ANXA2RQ3ZCQ2 193 aa18.27■□□□□ 0.52
RFFL-206ENST00000447669 NAT8BQ9UHF3 227 aa18.27■□□□□ 0.52
RFFL-206ENST00000447669 PRM2P04554 102 aa18.27■□□□□ 0.51
RFFL-206ENST00000447669 RPS10P46783 165 aaKnown RBP18.27■□□□□ 0.51
RFFL-206ENST00000447669 GNRH2O43555 120 aa18.26■□□□□ 0.51
RFFL-206ENST00000447669 TSPOP30536 169 aa18.25■□□□□ 0.51
RFFL-206ENST00000447669 GTSCR1Q86UQ5 136 aa18.25■□□□□ 0.51
RFFL-206ENST00000447669 XCL2Q9UBD3 114 aa18.25■□□□□ 0.51
RFFL-206ENST00000447669 BTF3L4Q96K17 158 aa18.25■□□□□ 0.51
RFFL-206ENST00000447669 TP53TG3Q9ULZ0 132 aa18.25■□□□□ 0.51
RFFL-206ENST00000447669 FAM110AQ9BQ89 295 aa18.24■□□□□ 0.51
RFFL-206ENST00000447669 CMC4P56277 68 aaPredicted RBP18.23■□□□□ 0.51
RFFL-206ENST00000447669 LYZL1Q6UWQ5 148 aa18.23■□□□□ 0.51
RFFL-206ENST00000447669 GFRA4Q9GZZ7 299 aa18.23■□□□□ 0.51
RFFL-206ENST00000447669 ARMS2P0C7Q2 107 aa18.23■□□□□ 0.51
RFFL-206ENST00000447669 TIMM8BQ9Y5J9 83 aaPredicted RBP18.23■□□□□ 0.51
RFFL-206ENST00000447669 WIPF1O43516 503 aa18.22■□□□□ 0.51
RFFL-206ENST00000447669 HTN1P15515 57 aa18.22■□□□□ 0.51
RFFL-206ENST00000447669 KRTAP10-11P60412 298 aa18.22■□□□□ 0.51
RFFL-206ENST00000447669 Q8N1Y9 231 aa18.22■□□□□ 0.51
RFFL-206ENST00000447669 FOXA3P55318 350 aaPredicted RBP18.21■□□□□ 0.51
RFFL-206ENST00000447669 XKRY2A2RUG3 117 aa18.2■□□□□ 0.5
RFFL-206ENST00000447669 GIG44P09565 113 aaPredicted RBP18.2■□□□□ 0.5
RFFL-206ENST00000447669 CAMPP49913 170 aa18.2■□□□□ 0.5
RFFL-206ENST00000447669 FER1L6-AS1Q8NA97 138 aa18.2■□□□□ 0.5
RFFL-206ENST00000447669 TRGC2P03986 189 aa18.2■□□□□ 0.5
RFFL-206ENST00000447669 IGLC6P0CF74 106 aa18.2■□□□□ 0.5
RFFL-206ENST00000447669 G3V4G9 280 aa18.19■□□□□ 0.5
RFFL-206ENST00000447669 TYMSP04818 313 aa18.19■□□□□ 0.5
RFFL-206ENST00000447669 RPS20P60866 119 aaKnown RBP18.19■□□□□ 0.5
RFFL-206ENST00000447669 FAM159AQ6UWV7 190 aa18.19■□□□□ 0.5
RFFL-206ENST00000447669 FAM231BA6NCW3 169 aa18.18■□□□□ 0.5
RFFL-206ENST00000447669 H3BVH4 76 aa18.18■□□□□ 0.5
RFFL-206ENST00000447669 ZFP82Q8N141 532 aa18.18■□□□□ 0.5
RFFL-206ENST00000447669 SRD5A3Q9H8P0 318 aa18.18■□□□□ 0.5
RFFL-206ENST00000447669 CLUHP3Q96NS8 147 aa18.18■□□□□ 0.5
RFFL-206ENST00000447669 TRAV9-1A0A075B6T8 112 aa18.17■□□□□ 0.5
RFFL-206ENST00000447669 RAB4BP61018 213 aa18.17■□□□□ 0.5
RFFL-206ENST00000447669 MSRB1Q9NZV6 116 aa18.17■□□□□ 0.5
RFFL-206ENST00000447669 MUC4Q99102 2169 aa18.17■□□□□ 0.5
RFFL-206ENST00000447669 IGHV3OR16-12A0A075B7B8 117 aa18.16■□□□□ 0.5
RFFL-206ENST00000447669 SSBP4Q9BWG4 385 aaPredicted RBP18.16■□□□□ 0.5
RFFL-206ENST00000447669 OR10AG1Q8NH19 301 aa18.16■□□□□ 0.5
RFFL-206ENST00000447669 IGHV1OR15-1A0A075B7D0 117 aa18.15■□□□□ 0.5
RFFL-206ENST00000447669 A0A1B0GUT8 65 aa18.15■□□□□ 0.5
RFFL-206ENST00000447669 A0A1B0GXF2 115 aa18.15■□□□□ 0.5
RFFL-206ENST00000447669 MDFICQ9P1T7 246 aa18.15■□□□□ 0.5
RFFL-206ENST00000447669 NOTCH1P46531 2555 aa18.15■□□□□ 0.5
RFFL-206ENST00000447669 SNURFLB1AK76 121 aa18.15■□□□□ 0.5
RFFL-206ENST00000447669 RNASE3P12724 160 aaKnown RBP18.15■□□□□ 0.5
RFFL-206ENST00000447669 FABP9Q0Z7S8 132 aa18.15■□□□□ 0.5
RFFL-206ENST00000447669 INSP01308 110 aa18.14■□□□□ 0.49
RFFL-206ENST00000447669 S100A4P26447 101 aaKnown RBP18.14■□□□□ 0.49
RFFL-206ENST00000447669 NUTF2P61970 127 aaKnown RBP18.14■□□□□ 0.49
RFFL-206ENST00000447669 TMEM136Q6ZRR5 245 aa18.14■□□□□ 0.49
RFFL-206ENST00000447669 C1orf158Q8N1D5 194 aa18.14■□□□□ 0.49
RFFL-206ENST00000447669 NBEAL2Q6ZNJ1 2754 aa18.14■□□□□ 0.49
RFFL-206ENST00000447669 NTF3P20783 257 aa18.13■□□□□ 0.49
RFFL-206ENST00000447669 CTRLP40313 264 aa18.13■□□□□ 0.49
RFFL-206ENST00000447669 ASIPP42127 132 aa18.13■□□□□ 0.49
RFFL-206ENST00000447669 FRZBQ92765 325 aa18.13■□□□□ 0.49
RFFL-206ENST00000447669 LINC01587Q99440 93 aa18.13■□□□□ 0.49
RFFL-206ENST00000447669 TRAPPC1Q9Y5R8 145 aa18.13■□□□□ 0.49
RFFL-206ENST00000447669 HBBP68871 147 aa18.12■□□□□ 0.49
RFFL-206ENST00000447669 TDRG1Q3Y452 100 aa18.12■□□□□ 0.49
RFFL-206ENST00000447669 CBY3A6NI87 242 aa18.11■□□□□ 0.49
RFFL-206ENST00000447669 PHOX2AO14813 284 aa18.11■□□□□ 0.49
RFFL-206ENST00000447669 TWIST1Q15672 202 aa18.11■□□□□ 0.49
RFFL-206ENST00000447669 KIAA1644Q3SXP7 199 aa18.11■□□□□ 0.49
RFFL-206ENST00000447669 KCNS1Q96KK3 526 aa18.11■□□□□ 0.49
RFFL-206ENST00000447669 TMEM208Q9BTX3 173 aa18.1■□□□□ 0.49
RFFL-206ENST00000447669 MRPL18Q9H0U6 180 aaKnown RBP18.1■□□□□ 0.49
RFFL-206ENST00000447669 IGHV3-16A0A0C4DH30 117 aa18.1■□□□□ 0.49
RFFL-206ENST00000447669 ATP5L2Q7Z4Y8 100 aa18.1■□□□□ 0.49
RFFL-206ENST00000447669 AZU1P20160 251 aa18.09■□□□□ 0.49
RFFL-206ENST00000447669 EGFEM1PQ0D2K5 195 aa18.09■□□□□ 0.49
RFFL-206ENST00000447669 SLAQ13239 276 aa18.09■□□□□ 0.49
RFFL-206ENST00000447669 GNB1LQ9BYB4 327 aa18.09■□□□□ 0.49
RFFL-206ENST00000447669 M0R381 172 aa18.08■□□□□ 0.49
RFFL-206ENST00000447669 SNAI2O43623 268 aa18.08■□□□□ 0.49
RFFL-206ENST00000447669 OR5AL1P0C617 328 aa18.08■□□□□ 0.49
RFFL-206ENST00000447669 RIGQ13278 110 aa18.08■□□□□ 0.49
RFFL-206ENST00000447669 BORCS7Q96B45 105 aa18.08■□□□□ 0.49
RFFL-206ENST00000447669 DNAH3Q8TD57 4116 aa18.08■□□□□ 0.48
RFFL-206ENST00000447669 C1orf196B1AJZ1 125 aa18.08■□□□□ 0.48
RFFL-206ENST00000447669 CSNK1G2-AS1Q8NCQ2 148 aa18.08■□□□□ 0.48
RFFL-206ENST00000447669 CSTL1Q9H114 145 aa18.08■□□□□ 0.48
RFFL-206ENST00000447669 NBEAL1Q6ZS30 2694 aa18.08■□□□□ 0.48
RFFL-206ENST00000447669 MGAM2Q2M2H8 2515 aa18.07■□□□□ 0.48
RFFL-206ENST00000447669 F2Z2F3 143 aa18.07■□□□□ 0.48
RFFL-206ENST00000447669 SPANXN1Q5VSR9 72 aa18.07■□□□□ 0.48
RFFL-206ENST00000447669 AMBPP02760 352 aa18.06■□□□□ 0.48
RFFL-206ENST00000447669 IGHV4-30-4P0DP06 118 aa18.06■□□□□ 0.48
RFFL-206ENST00000447669 DMRTA1Q5VZB9 504 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms