RNA–Protein interactions for RNA: ENST00000447271.1

PTPN3-205, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 2

Gene PTPN3, Length 587 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-205ENST00000447271 CTSGP08311 255 aa4.48□□□□□ -1.69
PTPN3-205ENST00000447271 NTF3P20783 257 aa4.48□□□□□ -1.69
PTPN3-205ENST00000447271 CRIP2P52943 208 aaPredicted RBP4.48□□□□□ -1.69
PTPN3-205ENST00000447271 LMO4P61968 165 aa4.48□□□□□ -1.69
PTPN3-205ENST00000447271 RHOGP84095 191 aa4.48□□□□□ -1.69
PTPN3-205ENST00000447271 FOXE3Q13461 319 aa4.48□□□□□ -1.69
PTPN3-205ENST00000447271 COL5A1-AS1Q5SY13 56 aa4.48□□□□□ -1.69
PTPN3-205ENST00000447271 LCN12Q6JVE5 192 aa4.48□□□□□ -1.69
PTPN3-205ENST00000447271 RNASEKQ6P5S7 137 aaKnown RBP4.48□□□□□ -1.69
PTPN3-205ENST00000447271 SIGLEC15Q6ZMC9 328 aa4.48□□□□□ -1.69
PTPN3-205ENST00000447271 TEX43Q6ZNM6 134 aa4.48□□□□□ -1.69
PTPN3-205ENST00000447271 ZNF493Q6ZR52 646 aa4.48□□□□□ -1.69
PTPN3-205ENST00000447271 Q86TA4 180 aa4.48□□□□□ -1.69
PTPN3-205ENST00000447271 NIT1Q86X76 327 aa4.48□□□□□ -1.69
PTPN3-205ENST00000447271 ZNF664Q8N3J9 261 aa4.48□□□□□ -1.69
PTPN3-205ENST00000447271 Q8N9W7 124 aa4.48□□□□□ -1.69
PTPN3-205ENST00000447271 PGLYRP4Q96LB8 373 aa4.48□□□□□ -1.69
PTPN3-205ENST00000447271 C2orf88Q9BSF0 95 aa4.48□□□□□ -1.69
PTPN3-205ENST00000447271 FAM103A1Q9BTL3 118 aaKnown RBP4.48□□□□□ -1.69
PTPN3-205ENST00000447271 PRDM13Q9H4Q3 707 aa4.48□□□□□ -1.69
PTPN3-205ENST00000447271 ST20Q9HBF5 79 aa4.48□□□□□ -1.69
PTPN3-205ENST00000447271 NXT2Q9NPJ8 142 aaKnown RBP4.48□□□□□ -1.69
PTPN3-205ENST00000447271 SMPXQ9UHP9 88 aa4.48□□□□□ -1.69
PTPN3-205ENST00000447271 LOC102724200A0A096LPH7 203 aaPredicted RBP4.47□□□□□ -1.69
PTPN3-205ENST00000447271 IGHV7-81A0A0B4J1V7 117 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 GRIFINA4D1Z8 144 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 K7EMT4 169 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 TCAPO15273 167 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 BUB3O43684 328 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 MSMBP08118 114 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 CNTFRP26992 372 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 CKS2P33552 79 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 SAA4P35542 130 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 MRGPRG-AS1Q2M3A8 158 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 UTF1Q5T230 341 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 C16orf54Q6UWD8 224 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 C9orf139Q6ZV77 190 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 SPATA12Q7Z6I5 190 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 LHFPL4Q7Z7J7 247 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 Q8N1Y9 231 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 TMEM256Q8N2U0 113 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 FER1L6-AS1Q8NA97 138 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 ZNF502Q8TBZ5 544 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 C18orf32Q8TCD1 76 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 C16orf92Q96LL3 132 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 LINC00479Q96M42 142 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 PRR25Q96S07 402 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 BPESC1Q9GZL8 116 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 UFC1Q9Y3C8 167 aa4.47□□□□□ -1.69
PTPN3-205ENST00000447271 MRPS16Q9Y3D3 137 aaKnown RBP4.47□□□□□ -1.69
PTPN3-205ENST00000447271 IGHV3-21A0A0B4J1V1 117 aa4.46□□□□□ -1.7
PTPN3-205ENST00000447271 A0A1B0GXF2 115 aa4.46□□□□□ -1.7
PTPN3-205ENST00000447271 SH2D7A6NKC9 451 aaPredicted RBP4.46□□□□□ -1.7
PTPN3-205ENST00000447271 VWC2LB2RUY7 222 aa4.46□□□□□ -1.7
PTPN3-205ENST00000447271 CRXO43186 299 aaPredicted RBP4.46□□□□□ -1.7
PTPN3-205ENST00000447271 FCN3O75636 299 aa4.46□□□□□ -1.7
PTPN3-205ENST00000447271 TRGV3P03979 118 aa4.46□□□□□ -1.7
PTPN3-205ENST00000447271 APELAP0DMC3 54 aa4.46□□□□□ -1.7
PTPN3-205ENST00000447271 TSPOP30536 169 aa4.46□□□□□ -1.7
PTPN3-205ENST00000447271 ZNF138P52744 262 aa4.46□□□□□ -1.7
PTPN3-205ENST00000447271 TWIST1Q15672 202 aa4.46□□□□□ -1.7
PTPN3-205ENST00000447271 ECSCRQ19T08 205 aa4.46□□□□□ -1.7
PTPN3-205ENST00000447271 EXOC3-AS1Q8N2X6 119 aa4.46□□□□□ -1.7
PTPN3-205ENST00000447271 GATD1Q8NB37 220 aa4.46□□□□□ -1.7
PTPN3-205ENST00000447271 OR1N2Q8NGR9 330 aa4.46□□□□□ -1.7
PTPN3-205ENST00000447271 DPF1Q92782 380 aa4.46□□□□□ -1.7
PTPN3-205ENST00000447271 NPFFR1Q9GZQ6 430 aa4.46□□□□□ -1.7
PTPN3-205ENST00000447271 MAP1LC3AQ9H492 121 aa4.46□□□□□ -1.7
PTPN3-205ENST00000447271 DOCK11Q5JSL3 2073 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 FSIP2Q5CZC0 6907 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 TRAV21A0A0B4J279 112 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 ATP5LO75964 103 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 LY6G6CO95867 125 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 S100A4P26447 101 aaKnown RBP4.45□□□□□ -1.7
PTPN3-205ENST00000447271 GPR183P32249 361 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 ARL3P36405 182 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 HNRNPA3P51991 378 aaKnown RBP4.45□□□□□ -1.7
PTPN3-205ENST00000447271 CMC4P56277 68 aaPredicted RBP4.45□□□□□ -1.7
PTPN3-205ENST00000447271 SNRPD3P62318 126 aaKnown RBP4.45□□□□□ -1.7
PTPN3-205ENST00000447271 RPL11P62913 178 aaKnown RBP4.45□□□□□ -1.7
PTPN3-205ENST00000447271 GNG5P63218 68 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 SSBP2P81877 361 aaPredicted RBP4.45□□□□□ -1.7
PTPN3-205ENST00000447271 KIAA1644Q3SXP7 199 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 SPATA45Q537H7 98 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 C9orf152Q5JTZ5 239 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 SERTAD4-AS1Q5TG53 156 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 MORN5Q5VZ52 161 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 FAM104BQ5XKR9 115 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 LEMD1Q68G75 181 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 CLEC19AQ6UXS0 136 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 C9orf47Q6ZRZ4 202 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 C5orf56Q8N8D9 126 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 MYOZ3Q8TDC0 251 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 C14orf144Q96I85 54 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 PRELID3AQ96N28 172 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 TPPP3Q9BW30 176 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 PRO1933Q9H354 126 aa4.45□□□□□ -1.7
PTPN3-205ENST00000447271 MRPL36Q9P0J6 103 aaKnown RBP4.45□□□□□ -1.7
PTPN3-205ENST00000447271 DYNC1H1Q14204 4646 aaKnown RBP4.44□□□□□ -1.7
PTPN3-205ENST00000447271 KIR2DL5BA0A0G2JN68 375 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms