RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 H3BNG1 76 aa13.05□□□□□ -0.32
HDAC4-203ENST00000445704 PEX7O00628 323 aa13.05□□□□□ -0.32
HDAC4-203ENST00000445704 GCGP01275 180 aa13.05□□□□□ -0.32
HDAC4-203ENST00000445704 Q6ZR54 194 aa13.05□□□□□ -0.32
HDAC4-203ENST00000445704 DNAH2Q9P225 4427 aa13.04□□□□□ -0.32
HDAC4-203ENST00000445704 PFDN1O60925 122 aa13.04□□□□□ -0.32
HDAC4-203ENST00000445704 FAM3BP58499 235 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-203ENST00000445704 ZNRF2Q8NHG8 242 aa13.04□□□□□ -0.32
HDAC4-203ENST00000445704 FAM213BQ8TBF2 198 aa13.04□□□□□ -0.32
HDAC4-203ENST00000445704 SPXQ9BT56 116 aa13.04□□□□□ -0.32
HDAC4-203ENST00000445704 SDF2L1Q9HCN8 221 aa13.04□□□□□ -0.32
HDAC4-203ENST00000445704 MUC4Q99102 2169 aa13.04□□□□□ -0.32
HDAC4-203ENST00000445704 FBLL1A6NHQ2 334 aaKnown RBP13.03□□□□□ -0.32
HDAC4-203ENST00000445704 CCL18P55774 89 aa13.03□□□□□ -0.32
HDAC4-203ENST00000445704 SMUG1Q53HV7 270 aa13.03□□□□□ -0.32
HDAC4-203ENST00000445704 Q86TA4 180 aa13.03□□□□□ -0.32
HDAC4-203ENST00000445704 TCTE3Q8IZS6 198 aa13.03□□□□□ -0.32
HDAC4-203ENST00000445704 STOML3Q8TAV4 291 aa13.03□□□□□ -0.32
HDAC4-203ENST00000445704 MBD3L1Q8WWY6 194 aa13.03□□□□□ -0.32
HDAC4-203ENST00000445704 RASL10AQ92737 203 aa13.03□□□□□ -0.32
HDAC4-203ENST00000445704 ARL2-SNX15V9GYD0 113 aa13.03□□□□□ -0.32
HDAC4-203ENST00000445704 A0A1B0GV50 99 aa13.02□□□□□ -0.33
HDAC4-203ENST00000445704 UMAD1C9J7I0 102 aa13.02□□□□□ -0.33
HDAC4-203ENST00000445704 PFN1P07737 140 aaKnown RBP13.02□□□□□ -0.33
HDAC4-203ENST00000445704 SFTA3P0C7M3 94 aa13.02□□□□□ -0.33
HDAC4-203ENST00000445704 FHL2Q14192 279 aa13.02□□□□□ -0.33
HDAC4-203ENST00000445704 ZFP69Q49AA0 526 aa13.02□□□□□ -0.33
HDAC4-203ENST00000445704 SAPCD1Q5SSQ6 148 aa13.02□□□□□ -0.33
HDAC4-203ENST00000445704 HIST1H2BAQ96A08 127 aa13.02□□□□□ -0.33
HDAC4-203ENST00000445704 KCNS1Q96KK3 526 aa13.02□□□□□ -0.33
HDAC4-203ENST00000445704 NKX6-2Q9C056 277 aaPredicted RBP13.02□□□□□ -0.33
HDAC4-203ENST00000445704 A0A096LPF7 62 aa13.01□□□□□ -0.33
HDAC4-203ENST00000445704 RTL8CO15255 209 aa13.01□□□□□ -0.33
HDAC4-203ENST00000445704 TPT1P13693 172 aaKnown RBP13.01□□□□□ -0.33
HDAC4-203ENST00000445704 LGALSLQ3ZCW2 172 aaPredicted RBP13.01□□□□□ -0.33
HDAC4-203ENST00000445704 SFT2D1Q8WV19 159 aa13.01□□□□□ -0.33
HDAC4-203ENST00000445704 ZNF479Q96JC4 524 aa13.01□□□□□ -0.33
HDAC4-203ENST00000445704 M0R2P5 195 aa13□□□□□ -0.33
HDAC4-203ENST00000445704 PAGE4O60829 102 aa13□□□□□ -0.33
HDAC4-203ENST00000445704 PPT1P50897 306 aa13□□□□□ -0.33
HDAC4-203ENST00000445704 EIF5AP63241 154 aaKnown RBP13□□□□□ -0.33
HDAC4-203ENST00000445704 ESRGQ1W209 222 aa13□□□□□ -0.33
HDAC4-203ENST00000445704 CST9LP1Q5W188 147 aa13□□□□□ -0.33
HDAC4-203ENST00000445704 DNAH17Q9UFH2 4485 aa13□□□□□ -0.33
HDAC4-203ENST00000445704 FAT2Q9NYQ8 4349 aa12.99□□□□□ -0.33
HDAC4-203ENST00000445704 hCG_2014768A0A024R1R8 64 aa12.99□□□□□ -0.33
HDAC4-203ENST00000445704 PAX4O43316 350 aa12.99□□□□□ -0.33
HDAC4-203ENST00000445704 CRYBA4P53673 196 aa12.99□□□□□ -0.33
HDAC4-203ENST00000445704 DPPA3Q6W0C5 159 aa12.99□□□□□ -0.33
HDAC4-203ENST00000445704 PRO0255Q9UI72 69 aa12.99□□□□□ -0.33
HDAC4-203ENST00000445704 HHLA3Q9XRX5 114 aa12.98□□□□□ -0.33
HDAC4-203ENST00000445704 TRAV4A0A0B4J268 109 aa12.97□□□□□ -0.33
HDAC4-203ENST00000445704 IGKV3D-20A0A0C4DH25 116 aa12.97□□□□□ -0.33
HDAC4-203ENST00000445704 TRGV4A0A0C4DH28 118 aa12.97□□□□□ -0.33
HDAC4-203ENST00000445704 C1QBP02746 253 aa12.97□□□□□ -0.33
HDAC4-203ENST00000445704 H2AFB1P0C5Y9 115 aa12.97□□□□□ -0.33
HDAC4-203ENST00000445704 LINC00336Q6ZUF6 198 aa12.97□□□□□ -0.33
HDAC4-203ENST00000445704 ZC2HC1AQ96GY0 325 aa12.97□□□□□ -0.33
HDAC4-203ENST00000445704 C9orf85Q96MD7 179 aa12.97□□□□□ -0.33
HDAC4-203ENST00000445704 ICOSQ9Y6W8 199 aa12.97□□□□□ -0.33
HDAC4-203ENST00000445704 NBDYA0A0U1RRE5 68 aa12.96□□□□□ -0.33
HDAC4-203ENST00000445704 CRIP1P50238 77 aa12.96□□□□□ -0.33
HDAC4-203ENST00000445704 FMC1Q96HJ9 113 aa12.96□□□□□ -0.33
HDAC4-203ENST00000445704 TCEAL7Q9BRU2 100 aa12.96□□□□□ -0.33
HDAC4-203ENST00000445704 MRPS16Q9Y3D3 137 aaKnown RBP12.96□□□□□ -0.33
HDAC4-203ENST00000445704 TRBV6-1A0A0K0K1D8 114 aa12.95□□□□□ -0.34
HDAC4-203ENST00000445704 FABP5P3A8MUU1 101 aa12.95□□□□□ -0.34
HDAC4-203ENST00000445704 C9JCJ5 164 aa12.95□□□□□ -0.34
HDAC4-203ENST00000445704 RNASE3P12724 160 aaKnown RBP12.95□□□□□ -0.34
HDAC4-203ENST00000445704 AKR1C3P42330 323 aa12.95□□□□□ -0.34
HDAC4-203ENST00000445704 UBE2G1P62253 170 aa12.95□□□□□ -0.34
HDAC4-203ENST00000445704 SLAQ13239 276 aa12.95□□□□□ -0.34
HDAC4-203ENST00000445704 COX8CQ7Z4L0 72 aa12.95□□□□□ -0.34
HDAC4-203ENST00000445704 OR4C5Q8NGB2 326 aa12.95□□□□□ -0.34
HDAC4-203ENST00000445704 UPK3BQ9BT76 320 aa12.95□□□□□ -0.34
HDAC4-203ENST00000445704 ZFP30Q9Y2G7 519 aa12.95□□□□□ -0.34
HDAC4-203ENST00000445704 HECTD4Q9Y4D8 3996 aa12.95□□□□□ -0.34
HDAC4-203ENST00000445704 SCO2A0A1W2PP80 73 aa12.94□□□□□ -0.34
HDAC4-203ENST00000445704 CCL20P78556 96 aa12.94□□□□□ -0.34
HDAC4-203ENST00000445704 Q9H8V8 135 aa12.94□□□□□ -0.34
HDAC4-203ENST00000445704 A0A1B0GVY2 172 aa12.93□□□□□ -0.34
HDAC4-203ENST00000445704 PGPEP1LA6NFU8 196 aa12.93□□□□□ -0.34
HDAC4-203ENST00000445704 PRSS29PA6NIE9 313 aa12.93□□□□□ -0.34
HDAC4-203ENST00000445704 LTAP01374 205 aa12.93□□□□□ -0.34
HDAC4-203ENST00000445704 ZNF876PQ49A33 203 aa12.93□□□□□ -0.34
HDAC4-203ENST00000445704 C1orf134Q5TEV5 83 aa12.93□□□□□ -0.34
HDAC4-203ENST00000445704 AKAP14Q86UN6 197 aa12.93□□□□□ -0.34
HDAC4-203ENST00000445704 KRTAP1-5Q9BYS1 174 aa12.93□□□□□ -0.34
HDAC4-203ENST00000445704 SH2D1AO60880 128 aa12.92□□□□□ -0.34
HDAC4-203ENST00000445704 ZNF506Q5JVG8 444 aa12.92□□□□□ -0.34
HDAC4-203ENST00000445704 LOC100131303A0A0U1RQF7 123 aa12.91□□□□□ -0.34
HDAC4-203ENST00000445704 B4DEV8 164 aa12.91□□□□□ -0.34
HDAC4-203ENST00000445704 K7EQD1 137 aa12.91□□□□□ -0.34
HDAC4-203ENST00000445704 M0R036 132 aa12.91□□□□□ -0.34
HDAC4-203ENST00000445704 RS1O15537 224 aa12.91□□□□□ -0.34
HDAC4-203ENST00000445704 ORM1P02763 201 aa12.91□□□□□ -0.34
HDAC4-203ENST00000445704 SULT1A2P50226 295 aa12.91□□□□□ -0.34
HDAC4-203ENST00000445704 RAB5CP51148 216 aa12.91□□□□□ -0.34
HDAC4-203ENST00000445704 MRPL23Q16540 153 aaKnown RBP12.91□□□□□ -0.34
HDAC4-203ENST00000445704 CFAP126Q5VTH2 177 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms