RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 OR1N2Q8NGR9 330 aa13.48□□□□□ -0.25
CLDN9-201ENST00000445369 COX11Q9Y6N1 276 aa13.48□□□□□ -0.25
CLDN9-201ENST00000445369 J3KRW8 73 aa13.48□□□□□ -0.25
CLDN9-201ENST00000445369 FGF6P10767 208 aa13.48□□□□□ -0.25
CLDN9-201ENST00000445369 DEFB112Q30KQ8 113 aa13.48□□□□□ -0.25
CLDN9-201ENST00000445369 Q6ZVH6 145 aa13.48□□□□□ -0.25
CLDN9-201ENST00000445369 PEF1Q9UBV8 284 aaKnown RBP13.48□□□□□ -0.25
CLDN9-201ENST00000445369 SPG11Q96JI7 2443 aa13.47□□□□□ -0.25
CLDN9-201ENST00000445369 IGHV4-59P01825 116 aa13.47□□□□□ -0.25
CLDN9-201ENST00000445369 PSMB8P28062 276 aa13.47□□□□□ -0.25
CLDN9-201ENST00000445369 C12orf54Q6X4T0 127 aa13.47□□□□□ -0.25
CLDN9-201ENST00000445369 WFDC3Q8IUB2 231 aa13.47□□□□□ -0.25
CLDN9-201ENST00000445369 SMPXQ9UHP9 88 aa13.47□□□□□ -0.25
CLDN9-201ENST00000445369 USP9XQ93008 2570 aaPredicted RBP13.46□□□□□ -0.25
CLDN9-201ENST00000445369 TRAV26-2A0A0B4J265 109 aa13.46□□□□□ -0.25
CLDN9-201ENST00000445369 F6UB75 175 aa13.46□□□□□ -0.25
CLDN9-201ENST00000445369 K7EMT4 169 aa13.46□□□□□ -0.25
CLDN9-201ENST00000445369 C18orf15Q96N68 181 aa13.46□□□□□ -0.25
CLDN9-201ENST00000445369 IGKV3-7A0A075B6H7 116 aa13.46□□□□□ -0.26
CLDN9-201ENST00000445369 TRBV7-9A0A0J9YWB2 115 aa13.46□□□□□ -0.26
CLDN9-201ENST00000445369 FLNCQ14315 2725 aa13.45□□□□□ -0.26
CLDN9-201ENST00000445369 EDN2P20800 178 aa13.45□□□□□ -0.26
CLDN9-201ENST00000445369 TMEM158Q8WZ71 300 aa13.45□□□□□ -0.26
CLDN9-201ENST00000445369 DKK2Q9UBU2 259 aa13.45□□□□□ -0.26
CLDN9-201ENST00000445369 MRAP2Q96G30 205 aa13.44□□□□□ -0.26
CLDN9-201ENST00000445369 MED14OSP0DP75 135 aa13.44□□□□□ -0.26
CLDN9-201ENST00000445369 ANXA2RQ3ZCQ2 193 aa13.44□□□□□ -0.26
CLDN9-201ENST00000445369 J3QLI3 93 aa13.43□□□□□ -0.26
CLDN9-201ENST00000445369 ASIPP42127 132 aa13.43□□□□□ -0.26
CLDN9-201ENST00000445369 BOD1L2Q8IYS8 172 aa13.43□□□□□ -0.26
CLDN9-201ENST00000445369 RNASE4P34096 147 aaKnown RBP13.43□□□□□ -0.26
CLDN9-201ENST00000445369 KIR3DS1Q14943 382 aa13.43□□□□□ -0.26
CLDN9-201ENST00000445369 ODF1Q14990 250 aa13.43□□□□□ -0.26
CLDN9-201ENST00000445369 SELENOKQ9Y6D0 94 aa13.43□□□□□ -0.26
CLDN9-201ENST00000445369 CD5LO43866 347 aa13.42□□□□□ -0.26
CLDN9-201ENST00000445369 DCANP1Q8TF63 244 aa13.42□□□□□ -0.26
CLDN9-201ENST00000445369 ZMAT4Q9H898 229 aa13.42□□□□□ -0.26
CLDN9-201ENST00000445369 ZFYVE26Q68DK2 2539 aa13.42□□□□□ -0.26
CLDN9-201ENST00000445369 TMEM89A2RUT3 159 aa13.41□□□□□ -0.26
CLDN9-201ENST00000445369 M0R381 172 aa13.41□□□□□ -0.26
CLDN9-201ENST00000445369 COX6B1P14854 86 aa13.41□□□□□ -0.26
CLDN9-201ENST00000445369 SRD5A1P18405 259 aa13.41□□□□□ -0.26
CLDN9-201ENST00000445369 S100A4P26447 101 aaKnown RBP13.41□□□□□ -0.26
CLDN9-201ENST00000445369 LAGE3Q14657 143 aa13.41□□□□□ -0.26
CLDN9-201ENST00000445369 C10orf99Q6UWK7 81 aa13.41□□□□□ -0.26
CLDN9-201ENST00000445369 TAX1BP3O14907 124 aa13.41□□□□□ -0.26
CLDN9-201ENST00000445369 SAMD13Q5VXD3 122 aa13.41□□□□□ -0.26
CLDN9-201ENST00000445369 CSPG4Q6UVK1 2322 aa13.4□□□□□ -0.26
CLDN9-201ENST00000445369 A1L4Q6 167 aa13.4□□□□□ -0.26
CLDN9-201ENST00000445369 KLLNB2CW77 178 aa13.4□□□□□ -0.26
CLDN9-201ENST00000445369 SMIM17P0DL12 118 aa13.4□□□□□ -0.26
CLDN9-201ENST00000445369 SRSF1Q07955 248 aaKnown RBP eCLIP13.4□□□□□ -0.26
CLDN9-201ENST00000445369 PHLDA3Q9Y5J5 127 aa13.4□□□□□ -0.26
CLDN9-201ENST00000445369 SPRY2O43597 315 aa13.4□□□□□ -0.27
CLDN9-201ENST00000445369 TGFAP01135 160 aa13.4□□□□□ -0.27
CLDN9-201ENST00000445369 RNASE3P12724 160 aaKnown RBP13.4□□□□□ -0.27
CLDN9-201ENST00000445369 ID1P41134 155 aa13.4□□□□□ -0.27
CLDN9-201ENST00000445369 DPH3P1Q9H4G8 78 aa13.4□□□□□ -0.27
CLDN9-201ENST00000445369 ATP5LO75964 103 aa13.39□□□□□ -0.27
CLDN9-201ENST00000445369 TCTAP57738 103 aa13.39□□□□□ -0.27
CLDN9-201ENST00000445369 MAPK1IP1LQ8NDC0 245 aa13.39□□□□□ -0.27
CLDN9-201ENST00000445369 SMIM2Q9BVW6 85 aa13.39□□□□□ -0.27
CLDN9-201ENST00000445369 CCL25O15444 150 aa13.38□□□□□ -0.27
CLDN9-201ENST00000445369 GNRH2O43555 120 aa13.38□□□□□ -0.27
CLDN9-201ENST00000445369 PRSS1P07477 247 aa13.38□□□□□ -0.27
CLDN9-201ENST00000445369 MYO18BQ8IUG5 2567 aa13.38□□□□□ -0.27
CLDN9-201ENST00000445369 FSHBP01225 129 aa13.38□□□□□ -0.27
CLDN9-201ENST00000445369 UBE2V1Q13404 147 aa13.38□□□□□ -0.27
CLDN9-201ENST00000445369 OR9G4Q8NGQ1 327 aa13.38□□□□□ -0.27
CLDN9-201ENST00000445369 RASL10AQ92737 203 aa13.38□□□□□ -0.27
CLDN9-201ENST00000445369 FOXC2Q99958 501 aa13.38□□□□□ -0.27
CLDN9-201ENST00000445369 HHLA3Q9XRX5 114 aa13.38□□□□□ -0.27
CLDN9-201ENST00000445369 CELSR2Q9HCU4 2923 aa13.37□□□□□ -0.27
CLDN9-201ENST00000445369 ZNF462Q96JM2 2506 aa13.37□□□□□ -0.27
CLDN9-201ENST00000445369 SIVA1O15304 175 aa13.37□□□□□ -0.27
CLDN9-201ENST00000445369 UTP20O75691 2785 aaKnown RBP13.37□□□□□ -0.27
CLDN9-201ENST00000445369 NXPH4O95158 308 aa13.37□□□□□ -0.27
CLDN9-201ENST00000445369 CR1P17927 2039 aa13.37□□□□□ -0.27
CLDN9-201ENST00000445369 TMEM97Q5BJF2 176 aa13.37□□□□□ -0.27
CLDN9-201ENST00000445369 PSMG4Q5JS54 123 aa13.37□□□□□ -0.27
CLDN9-201ENST00000445369 C14orf178Q8N769 122 aaPredicted RBP13.37□□□□□ -0.27
CLDN9-201ENST00000445369 NMUP48645 174 aa13.36□□□□□ -0.27
CLDN9-201ENST00000445369 PTTG1IPP53801 180 aa13.36□□□□□ -0.27
CLDN9-201ENST00000445369 PCP2Q8IVA1 136 aa13.36□□□□□ -0.27
CLDN9-201ENST00000445369 VPREB3Q9UKI3 123 aa13.36□□□□□ -0.27
CLDN9-201ENST00000445369 IGKCP01834 107 aa13.36□□□□□ -0.27
CLDN9-201ENST00000445369 SUMO2P61956 95 aaKnown RBP13.36□□□□□ -0.27
CLDN9-201ENST00000445369 C20orf78Q9BR46 151 aa13.36□□□□□ -0.27
CLDN9-201ENST00000445369 MUC4Q99102 2169 aa13.36□□□□□ -0.27
CLDN9-201ENST00000445369 MYOZ3Q8TDC0 251 aa13.35□□□□□ -0.27
CLDN9-201ENST00000445369 AP1S3Q96PC3 154 aa13.35□□□□□ -0.27
CLDN9-201ENST00000445369 RNF223E7ERA6 249 aa13.35□□□□□ -0.27
CLDN9-201ENST00000445369 SEC11AP67812 179 aa13.35□□□□□ -0.27
CLDN9-201ENST00000445369 POM121L12Q8N7R1 296 aa13.35□□□□□ -0.27
CLDN9-201ENST00000445369 RPL39LQ96EH5 51 aaKnown RBP13.35□□□□□ -0.27
CLDN9-201ENST00000445369 CSMD2Q7Z408 3487 aa13.34□□□□□ -0.27
CLDN9-201ENST00000445369 DPM2O94777 84 aa13.34□□□□□ -0.27
CLDN9-201ENST00000445369 IGHV4-31P0DP07 118 aa13.34□□□□□ -0.27
CLDN9-201ENST00000445369 Q6YL49 198 aa13.34□□□□□ -0.27
CLDN9-201ENST00000445369 ADAMTSL5Q6ZMM2 481 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms