RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 FAM110AQ9BQ89 295 aa6.83□□□□□ -1.32
LINC00642-203ENST00000444942 SLC50A1Q9BRV3 221 aa6.83□□□□□ -1.32
LINC00642-203ENST00000444942 MLST8Q9BVC4 326 aa6.83□□□□□ -1.32
LINC00642-203ENST00000444942 RPP21Q9H633 154 aaKnown RBP6.83□□□□□ -1.32
LINC00642-203ENST00000444942 U3KQE9 123 aa6.83□□□□□ -1.32
LINC00642-203ENST00000444942 TRAV8-1A0A0A6YYK1 113 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 SNURFLB1AK76 121 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 BUB3O43684 328 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 SMIM6P0DI80 62 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 MEOX2P50222 304 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 CT83Q5H943 113 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 OR4B1Q8NGF8 309 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 TSKUQ8WUA8 353 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 MRPL18Q9H0U6 180 aaKnown RBP6.82□□□□□ -1.32
LINC00642-203ENST00000444942 MAP6D1Q9H9H5 199 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 NAT8BQ9UHF3 227 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 PSG8Q9UQ74 426 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 ZFP30Q9Y2G7 519 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 LOC102724200A0A096LPH7 203 aaPredicted RBP6.82□□□□□ -1.32
LINC00642-203ENST00000444942 XKRY2A2RUG3 117 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 C19orf71A6NCJ1 209 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 KNCNA6PVL3 124 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 A8MWL6 223 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 A8MZ25 164 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 M0R3E3 92 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 IGLV2-11P01706 119 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 RASL11AQ6T310 242 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 HIST3H2BBQ8N257 126 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 GNB1LQ9BYB4 327 aa6.82□□□□□ -1.32
LINC00642-203ENST00000444942 ZNF331Q9NQX6 463 aaPredicted RBP6.82□□□□□ -1.32
LINC00642-203ENST00000444942 K7EQG2 157 aa6.81□□□□□ -1.32
LINC00642-203ENST00000444942 SPINK4O60575 86 aa6.81□□□□□ -1.32
LINC00642-203ENST00000444942 CA1P00915 261 aaPredicted RBP6.81□□□□□ -1.32
LINC00642-203ENST00000444942 HLA-DQA1P01909 254 aa6.81□□□□□ -1.32
LINC00642-203ENST00000444942 CT45A10P0DMU9 189 aa6.81□□□□□ -1.32
LINC00642-203ENST00000444942 PRB4P10163 310 aaPredicted RBP6.81□□□□□ -1.32
LINC00642-203ENST00000444942 RAB4BP61018 213 aa6.81□□□□□ -1.32
LINC00642-203ENST00000444942 PSMG4Q5JS54 123 aa6.81□□□□□ -1.32
LINC00642-203ENST00000444942 COA6Q5JTJ3 125 aaKnown RBP6.81□□□□□ -1.32
LINC00642-203ENST00000444942 MRPL54Q6P161 138 aaKnown RBP6.81□□□□□ -1.32
LINC00642-203ENST00000444942 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.81□□□□□ -1.32
LINC00642-203ENST00000444942 C12orf57Q99622 126 aa6.81□□□□□ -1.32
LINC00642-203ENST00000444942 AGRNO00468 2067 aa6.8□□□□□ -1.32
LINC00642-203ENST00000444942 IGKV2-40A0A087WW87 121 aaPredicted RBP6.8□□□□□ -1.32
LINC00642-203ENST00000444942 NPIPB6E9PJ23 425 aa6.8□□□□□ -1.32
LINC00642-203ENST00000444942 IGKV2D-40P01614 121 aaPredicted RBP6.8□□□□□ -1.32
LINC00642-203ENST00000444942 DEFB1P60022 68 aa6.8□□□□□ -1.32
LINC00642-203ENST00000444942 PDZD11Q5EBL8 140 aa6.8□□□□□ -1.32
LINC00642-203ENST00000444942 SAPCD1Q5SSQ6 148 aa6.8□□□□□ -1.32
LINC00642-203ENST00000444942 IGFL4Q6B9Z1 124 aa6.8□□□□□ -1.32
LINC00642-203ENST00000444942 LINC00322Q6ZN03 302 aaPredicted RBP6.8□□□□□ -1.32
LINC00642-203ENST00000444942 TMEM136Q6ZRR5 245 aa6.8□□□□□ -1.32
LINC00642-203ENST00000444942 LINC00336Q6ZUF6 198 aa6.8□□□□□ -1.32
LINC00642-203ENST00000444942 ATP5L2Q7Z4Y8 100 aa6.8□□□□□ -1.32
LINC00642-203ENST00000444942 NUP35Q8NFH5 326 aa6.8□□□□□ -1.32
LINC00642-203ENST00000444942 DCANP1Q8TF63 244 aa6.8□□□□□ -1.32
LINC00642-203ENST00000444942 ZC2HC1AQ96GY0 325 aa6.8□□□□□ -1.32
LINC00642-203ENST00000444942 NEU1Q99519 415 aa6.8□□□□□ -1.32
LINC00642-203ENST00000444942 NDFIP1Q9BT67 221 aa6.8□□□□□ -1.32
LINC00642-203ENST00000444942 GFRA4Q9GZZ7 299 aa6.8□□□□□ -1.32
LINC00642-203ENST00000444942 NRN1Q9NPD7 142 aa6.8□□□□□ -1.32
LINC00642-203ENST00000444942 SRRM2Q9UQ35 2752 aaKnown RBP6.8□□□□□ -1.32
LINC00642-203ENST00000444942 FAM231BA6NCW3 169 aa6.79□□□□□ -1.32
LINC00642-203ENST00000444942 HIGD1CA8MV81 97 aa6.79□□□□□ -1.32
LINC00642-203ENST00000444942 CMC4P56277 68 aaPredicted RBP6.79□□□□□ -1.32
LINC00642-203ENST00000444942 GFI1BQ5VTD9 330 aa6.79□□□□□ -1.32
LINC00642-203ENST00000444942 LGALS9CQ6DKI2 356 aa6.79□□□□□ -1.32
LINC00642-203ENST00000444942 STHQ8IWL8 128 aa6.79□□□□□ -1.32
LINC00642-203ENST00000444942 OR2D3Q8NGH3 330 aa6.79□□□□□ -1.32
LINC00642-203ENST00000444942 MRPL53Q96EL3 112 aaKnown RBP6.79□□□□□ -1.32
LINC00642-203ENST00000444942 CLEC5AQ9NY25 188 aa6.79□□□□□ -1.32
LINC00642-203ENST00000444942 TRAV2A0A0B4J234 112 aa6.78□□□□□ -1.32
LINC00642-203ENST00000444942 RBAKDNA6NC62 111 aa6.78□□□□□ -1.32
LINC00642-203ENST00000444942 IFITM10A6NMD0 228 aa6.78□□□□□ -1.32
LINC00642-203ENST00000444942 IGKV3-20P01619 116 aa6.78□□□□□ -1.32
LINC00642-203ENST00000444942 FABP4P15090 132 aa6.78□□□□□ -1.32
LINC00642-203ENST00000444942 CRISP2P16562 243 aa6.78□□□□□ -1.32
LINC00642-203ENST00000444942 HLA-DMBP28068 263 aa6.78□□□□□ -1.32
LINC00642-203ENST00000444942 DEFB135Q30KP9 77 aa6.78□□□□□ -1.32
LINC00642-203ENST00000444942 MAPKAPK5-AS1Q8N8E1 139 aa6.78□□□□□ -1.32
LINC00642-203ENST00000444942 OR10D4PQ8NGN7 298 aa6.78□□□□□ -1.32
LINC00642-203ENST00000444942 C16orf92Q96LL3 132 aa6.78□□□□□ -1.32
LINC00642-203ENST00000444942 APCSP02743 223 aa6.77□□□□□ -1.33
LINC00642-203ENST00000444942 APOC4P55056 127 aa6.77□□□□□ -1.33
LINC00642-203ENST00000444942 FXYD7P58549 80 aa6.77□□□□□ -1.33
LINC00642-203ENST00000444942 SNRPD3P62318 126 aaKnown RBP6.77□□□□□ -1.33
LINC00642-203ENST00000444942 HBBP68871 147 aa6.77□□□□□ -1.33
LINC00642-203ENST00000444942 RBMY1FQ15415 496 aaKnown RBP6.77□□□□□ -1.33
LINC00642-203ENST00000444942 COX8CQ7Z4L0 72 aa6.77□□□□□ -1.33
LINC00642-203ENST00000444942 TMEM18Q96B42 140 aa6.77□□□□□ -1.33
LINC00642-203ENST00000444942 PGLYRP4Q96LB8 373 aa6.77□□□□□ -1.33
LINC00642-203ENST00000444942 C20orf173Q96LM9 149 aa6.77□□□□□ -1.33
LINC00642-203ENST00000444942 PACRGQ96M98 296 aaPredicted RBP6.77□□□□□ -1.33
LINC00642-203ENST00000444942 C8orf49Q96NF6 230 aa6.77□□□□□ -1.33
LINC00642-203ENST00000444942 HIST1H2BLQ99880 126 aa6.77□□□□□ -1.33
LINC00642-203ENST00000444942 APOBP04114 4563 aaKnown RBP6.76□□□□□ -1.33
LINC00642-203ENST00000444942 A0A1B0GXF2 115 aa6.76□□□□□ -1.33
LINC00642-203ENST00000444942 GRIFINA4D1Z8 144 aa6.76□□□□□ -1.33
LINC00642-203ENST00000444942 TMEM189A5PLL7 270 aa6.76□□□□□ -1.33
LINC00642-203ENST00000444942 NUPR2A6NF83 97 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms