RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 PMS2P5A8MQ11 134 aa4.33□□□□□ -1.72
PTPRC-209ENST00000442510 PRR25Q96S07 402 aa4.33□□□□□ -1.72
PTPRC-209ENST00000442510 CXXC4Q9H2H0 198 aa4.33□□□□□ -1.72
PTPRC-209ENST00000442510 C11orf1Q9H5F2 150 aa4.33□□□□□ -1.72
PTPRC-209ENST00000442510 Q9HAA7 133 aa4.33□□□□□ -1.72
PTPRC-209ENST00000442510 NUP188Q5SRE5 1749 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 RPL39P5Q59GN2 51 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 PMS2CLQ68D20 193 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 Q6ZVQ6 151 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 AHDC1Q5TGY3 1603 aaPredicted RBP4.32□□□□□ -1.72
PTPRC-209ENST00000442510 TANC2Q9HCD6 1990 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 EBI3Q14213 229 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 C14orf178Q8N769 122 aaPredicted RBP4.32□□□□□ -1.72
PTPRC-209ENST00000442510 FREM1Q5H8C1 2179 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 TICRRQ7Z2Z1 1910 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 IGKV3D-15A0A087WSY6 115 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 IGKV3D-11A0A0A0MRZ8 115 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 C11orf86A6NJI1 115 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 C17orf100A8MU93 164 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 IGKV3-15P01624 115 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 IGHV3-30P01768 117 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 IGKV3-11P04433 115 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 IGHV3-30-5P0DP03 117 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 ZNF497Q6ZNH5 498 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 ARFGEF1Q9Y6D6 1849 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 SHANK1Q9Y566 2161 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 CASP8AP2Q9UKL3 1982 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 KIDINS220Q9ULH0 1771 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 CLPSL1A2RUU4 121 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 PRYO14603 147 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 PRR20EP86478 221 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 PRR20CP86479 221 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 PRR20DP86480 221 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 PRR20BP86481 221 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 PRR20AP86496 221 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 Q5XG85 94 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 MDS2Q8NDY4 140 aa4.32□□□□□ -1.72
PTPRC-209ENST00000442510 C1orf147Q96MC9 270 aaPredicted RBP4.32□□□□□ -1.72
PTPRC-209ENST00000442510 IGKV2-40A0A087WW87 121 aaPredicted RBP4.31□□□□□ -1.72
PTPRC-209ENST00000442510 LECT2O14960 151 aa4.31□□□□□ -1.72
PTPRC-209ENST00000442510 NDUFB1O75438 58 aa4.31□□□□□ -1.72
PTPRC-209ENST00000442510 IGKV1-39P01597 117 aa4.31□□□□□ -1.72
PTPRC-209ENST00000442510 IGKV2D-40P01614 121 aaPredicted RBP4.31□□□□□ -1.72
PTPRC-209ENST00000442510 IGKV1D-39P04432 117 aa4.31□□□□□ -1.72
PTPRC-209ENST00000442510 HTN1P15515 57 aa4.31□□□□□ -1.72
PTPRC-209ENST00000442510 GNLYP22749 145 aa4.31□□□□□ -1.72
PTPRC-209ENST00000442510 WFDC5Q8TCV5 224 aa4.31□□□□□ -1.72
PTPRC-209ENST00000442510 DEFB104AQ8WTQ1 72 aa4.31□□□□□ -1.72
PTPRC-209ENST00000442510 ARFGEF3Q5TH69 2177 aa4.31□□□□□ -1.72
PTPRC-209ENST00000442510 RUSC1-AS1Q66K80 236 aa4.31□□□□□ -1.72
PTPRC-209ENST00000442510 SMCHD1A6NHR9 2005 aa4.31□□□□□ -1.72
PTPRC-209ENST00000442510 NYNRINQ9P2P1 1898 aaKnown RBP4.31□□□□□ -1.72
PTPRC-209ENST00000442510 PARP14Q460N5 1801 aa4.31□□□□□ -1.72
PTPRC-209ENST00000442510 ARHGEF17Q96PE2 2063 aaPredicted RBP4.31□□□□□ -1.72
PTPRC-209ENST00000442510 A0A087WWL8 130 aa4.31□□□□□ -1.72
PTPRC-209ENST00000442510 WI2-2373I1.2A0A1W2PRP0 233 aa4.31□□□□□ -1.72
PTPRC-209ENST00000442510 ZNF837Q96EG3 531 aaPredicted RBP4.31□□□□□ -1.72
PTPRC-209ENST00000442510 IGKV3OR2-268A0A0C4DH90 116 aa4.31□□□□□ -1.72
PTPRC-209ENST00000442510 FHL2Q14192 279 aa4.31□□□□□ -1.72
PTPRC-209ENST00000442510 RSPO2Q6UXX9 243 aaPredicted RBP4.31□□□□□ -1.72
PTPRC-209ENST00000442510 C7orf65Q6ZTY9 151 aa4.31□□□□□ -1.72
PTPRC-209ENST00000442510 SCXQ7RTU7 201 aa4.31□□□□□ -1.72
PTPRC-209ENST00000442510 ZNF784Q8NCA9 323 aaPredicted RBP4.31□□□□□ -1.72
PTPRC-209ENST00000442510 LINC00474Q9P2X8 69 aa4.31□□□□□ -1.72
PTPRC-209ENST00000442510 IGKV1D-43A0A0B4J1Z2 117 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 IGKV1-12A0A0C4DH73 117 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 SDHAF1A6NFY7 115 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 IGKV1D-12P01611 117 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 ZNF883P0CG24 379 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 PDE6GP18545 87 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 AGRNO00468 2067 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 C11orf45Q8TAV5 145 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 URB1-AS1Q96HZ7 61 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 SRRM4A7MD48 611 aaKnown RBP4.3□□□□□ -1.72
PTPRC-209ENST00000442510 IGLV2-8P01709 118 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 ADORA2A-AS1P86434 159 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 NREPQ16612 68 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 FAM19A1Q7Z5A9 133 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 Q8TAT8 98 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 MRPL36Q9P0J6 103 aaKnown RBP4.3□□□□□ -1.72
PTPRC-209ENST00000442510 RNF7Q9UBF6 113 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 CELA1Q9UNI1 258 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 TPRP12270 2363 aaKnown RBP4.3□□□□□ -1.72
PTPRC-209ENST00000442510 RGPD2P0DJD1 1756 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 PVRIGQ6DKI7 326 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 DCANP1Q8TF63 244 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 ITLN1Q8WWA0 313 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 C8orf49Q96NF6 230 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 LIMD2Q9BT23 127 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 TMEM14CQ9P0S9 112 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 PTPRDP23468 1912 aa4.3□□□□□ -1.72
PTPRC-209ENST00000442510 GREB1LQ9C091 1923 aaPredicted RBP4.3□□□□□ -1.72
PTPRC-209ENST00000442510 THADAQ6YHU6 1953 aa4.29□□□□□ -1.72
PTPRC-209ENST00000442510 TMEM263Q8WUH6 116 aaKnown RBP4.29□□□□□ -1.72
PTPRC-209ENST00000442510 GAFA1Q96PS6 74 aa4.29□□□□□ -1.72
PTPRC-209ENST00000442510 MIAQ16674 131 aa4.29□□□□□ -1.72
PTPRC-209ENST00000442510 ARFGEF2Q9Y6D5 1785 aa4.29□□□□□ -1.72
PTPRC-209ENST00000442510 TRBV6-6A0A0A6YYG2 114 aa4.29□□□□□ -1.72
PTPRC-209ENST00000442510 PRM2P04554 102 aa4.29□□□□□ -1.72
PTPRC-209ENST00000442510 ZNF134P52741 427 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms