RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 HSPG2P98160 4391 aa8.04□□□□□ -1.12
TTC28-203ENST00000442232 SERTM2A0A1B0GWG4 89 aa8.04□□□□□ -1.12
TTC28-203ENST00000442232 CDC34P49427 236 aaPredicted RBP8.04□□□□□ -1.12
TTC28-203ENST00000442232 RAB2AP61019 212 aa8.04□□□□□ -1.12
TTC28-203ENST00000442232 TDRG1Q3Y452 100 aa8.04□□□□□ -1.12
TTC28-203ENST00000442232 Q6ZRN7 208 aaPredicted RBP8.04□□□□□ -1.12
TTC28-203ENST00000442232 C10orf126Q8N4M7 172 aa8.04□□□□□ -1.12
TTC28-203ENST00000442232 ASB13Q8WXK3 278 aa8.04□□□□□ -1.12
TTC28-203ENST00000442232 LRP1BQ9NZR2 4599 aa8.04□□□□□ -1.12
TTC28-203ENST00000442232 HMGB3O15347 200 aaKnown RBP8.03□□□□□ -1.12
TTC28-203ENST00000442232 EIF3GO75821 320 aaKnown RBP eCLIP8.03□□□□□ -1.12
TTC28-203ENST00000442232 ARL14EPLP0DKL9 152 aa8.03□□□□□ -1.12
TTC28-203ENST00000442232 PPT1P50897 306 aa8.03□□□□□ -1.12
TTC28-203ENST00000442232 GNG5P63218 68 aa8.03□□□□□ -1.12
TTC28-203ENST00000442232 ZFP69Q49AA0 526 aa8.03□□□□□ -1.12
TTC28-203ENST00000442232 MSRB1Q9NZV6 116 aa8.03□□□□□ -1.12
TTC28-203ENST00000442232 TRAV8-1A0A0A6YYK1 113 aa8.02□□□□□ -1.13
TTC28-203ENST00000442232 IGHV3-16A0A0C4DH30 117 aa8.02□□□□□ -1.13
TTC28-203ENST00000442232 FBLL1A6NHQ2 334 aaKnown RBP8.02□□□□□ -1.13
TTC28-203ENST00000442232 A6NHS1 94 aa8.02□□□□□ -1.13
TTC28-203ENST00000442232 GNRH2O43555 120 aa8.02□□□□□ -1.13
TTC28-203ENST00000442232 TYMSP04818 313 aa8.02□□□□□ -1.13
TTC28-203ENST00000442232 WFDC10BQ8IUB3 73 aa8.02□□□□□ -1.13
TTC28-203ENST00000442232 C5orf17Q8NAS9 161 aa8.02□□□□□ -1.13
TTC28-203ENST00000442232 HSD17B11Q8NBQ5 300 aa8.02□□□□□ -1.13
TTC28-203ENST00000442232 WFDC1Q9HC57 220 aa8.02□□□□□ -1.13
TTC28-203ENST00000442232 BOLA1Q9Y3E2 137 aa8.02□□□□□ -1.13
TTC28-203ENST00000442232 PSCAO43653 123 aa8.01□□□□□ -1.13
TTC28-203ENST00000442232 MBP02144 154 aa8.01□□□□□ -1.13
TTC28-203ENST00000442232 CRYGDP07320 174 aa8.01□□□□□ -1.13
TTC28-203ENST00000442232 DNAH10OSP0CZ25 163 aa8.01□□□□□ -1.13
TTC28-203ENST00000442232 PRADC1Q9BSG0 188 aa8.01□□□□□ -1.13
TTC28-203ENST00000442232 DNAH5Q8TE73 4624 aa8.01□□□□□ -1.13
TTC28-203ENST00000442232 TRAV8-6A0A0B4J262 113 aa8□□□□□ -1.13
TTC28-203ENST00000442232 TAAR5O14804 337 aa8□□□□□ -1.13
TTC28-203ENST00000442232 CIDEAO60543 219 aa8□□□□□ -1.13
TTC28-203ENST00000442232 PFN1P07737 140 aaKnown RBP8□□□□□ -1.13
TTC28-203ENST00000442232 GATA1P15976 413 aaPredicted RBP8□□□□□ -1.13
TTC28-203ENST00000442232 OR2G3Q8NGZ4 309 aa8□□□□□ -1.13
TTC28-203ENST00000442232 PSMG3Q9BT73 122 aaPredicted RBP8□□□□□ -1.13
TTC28-203ENST00000442232 MED28Q9H204 178 aa8□□□□□ -1.13
TTC28-203ENST00000442232 TMEM167BQ9NRX6 74 aa8□□□□□ -1.13
TTC28-203ENST00000442232 TNFRSF18Q9Y5U5 241 aa8□□□□□ -1.13
TTC28-203ENST00000442232 ALG5Q9Y673 324 aa8□□□□□ -1.13
TTC28-203ENST00000442232 A0A087WTM6 91 aa7.99□□□□□ -1.13
TTC28-203ENST00000442232 EPM2AB3EWF7 344 aa7.99□□□□□ -1.13
TTC28-203ENST00000442232 CXorf1O96002 111 aa7.99□□□□□ -1.13
TTC28-203ENST00000442232 GCGP01275 180 aa7.99□□□□□ -1.13
TTC28-203ENST00000442232 TCRAP04437 139 aa7.99□□□□□ -1.13
TTC28-203ENST00000442232 STAG3L2P0CL84 134 aa7.99□□□□□ -1.13
TTC28-203ENST00000442232 STAG3L3P0CL85 134 aa7.99□□□□□ -1.13
TTC28-203ENST00000442232 TIRAPP58753 221 aa7.99□□□□□ -1.13
TTC28-203ENST00000442232 RHOHQ15669 191 aa7.99□□□□□ -1.13
TTC28-203ENST00000442232 ZNF876PQ49A33 203 aa7.99□□□□□ -1.13
TTC28-203ENST00000442232 SMUG1Q53HV7 270 aa7.99□□□□□ -1.13
TTC28-203ENST00000442232 SGK494Q96LW2 274 aa7.99□□□□□ -1.13
TTC28-203ENST00000442232 IGHV3-38A0A0C4DH36 116 aa7.98□□□□□ -1.13
TTC28-203ENST00000442232 LOC100131303A0A0U1RQF7 123 aa7.98□□□□□ -1.13
TTC28-203ENST00000442232 GCHFRP30047 84 aa7.98□□□□□ -1.13
TTC28-203ENST00000442232 SERF2P84101 59 aa7.98□□□□□ -1.13
TTC28-203ENST00000442232 FLI1Q01543 452 aaPredicted RBP7.98□□□□□ -1.13
TTC28-203ENST00000442232 OR10J3Q5JRS4 329 aa7.98□□□□□ -1.13
TTC28-203ENST00000442232 PRNTQ86SH4 94 aa7.98□□□□□ -1.13
TTC28-203ENST00000442232 CYB561D1Q8N8Q1 229 aa7.98□□□□□ -1.13
TTC28-203ENST00000442232 INO80EQ8NBZ0 244 aaPredicted RBP7.98□□□□□ -1.13
TTC28-203ENST00000442232 RAB24Q969Q5 203 aa7.98□□□□□ -1.13
TTC28-203ENST00000442232 TVP23CQ96ET8 276 aa7.98□□□□□ -1.13
TTC28-203ENST00000442232 AQP10Q96PS8 301 aa7.98□□□□□ -1.13
TTC28-203ENST00000442232 ACTR3CQ9C0K3 210 aaPredicted RBP7.98□□□□□ -1.13
TTC28-203ENST00000442232 SH3BGRL3Q9H299 93 aa7.98□□□□□ -1.13
TTC28-203ENST00000442232 PSG8Q9UQ74 426 aa7.98□□□□□ -1.13
TTC28-203ENST00000442232 RS1O15537 224 aa7.97□□□□□ -1.13
TTC28-203ENST00000442232 PTTG1O95997 202 aa7.97□□□□□ -1.13
TTC28-203ENST00000442232 S100A4P26447 101 aaKnown RBP7.97□□□□□ -1.13
TTC28-203ENST00000442232 ATP6V0CP27449 155 aa7.97□□□□□ -1.13
TTC28-203ENST00000442232 FUSP35637 526 aaKnown RBP eCLIP7.97□□□□□ -1.13
TTC28-203ENST00000442232 SUMO1P63165 101 aaKnown RBP7.97□□□□□ -1.13
TTC28-203ENST00000442232 SAPCD1Q5SSQ6 148 aa7.97□□□□□ -1.13
TTC28-203ENST00000442232 TMEM75Q8N9X5 138 aa7.97□□□□□ -1.13
TTC28-203ENST00000442232 APOBP04114 4563 aaKnown RBP7.97□□□□□ -1.13
TTC28-203ENST00000442232 BORCS7-ASMTA0A0B4J1R7 106 aa7.96□□□□□ -1.14
TTC28-203ENST00000442232 IGHV3-73A0A0B4J1V6 119 aa7.96□□□□□ -1.14
TTC28-203ENST00000442232 TRBV6-4A0A1B0GX49 114 aa7.96□□□□□ -1.14
TTC28-203ENST00000442232 IFNA7P01567 189 aa7.96□□□□□ -1.14
TTC28-203ENST00000442232 MGST1P10620 155 aaKnown RBP7.96□□□□□ -1.14
TTC28-203ENST00000442232 LINC01556Q5JQF7 62 aa7.96□□□□□ -1.14
TTC28-203ENST00000442232 CFAP126Q5VTH2 177 aa7.96□□□□□ -1.14
TTC28-203ENST00000442232 SLC25A29Q8N8R3 303 aa7.96□□□□□ -1.14
TTC28-203ENST00000442232 FRZBQ92765 325 aa7.96□□□□□ -1.14
TTC28-203ENST00000442232 BATF3Q9NR55 127 aa7.96□□□□□ -1.14
TTC28-203ENST00000442232 EPDR1Q9UM22 224 aa7.96□□□□□ -1.14
TTC28-203ENST00000442232 TNFSF18Q9UNG2 199 aa7.96□□□□□ -1.14
TTC28-203ENST00000442232 GGTLC3B5MD39 225 aa7.95□□□□□ -1.14
TTC28-203ENST00000442232 GCSHP23434 173 aa7.95□□□□□ -1.14
TTC28-203ENST00000442232 ZNF80P51504 273 aaPredicted RBP7.95□□□□□ -1.14
TTC28-203ENST00000442232 ZNF506Q5JVG8 444 aa7.95□□□□□ -1.14
TTC28-203ENST00000442232 SUN5Q8TC36 379 aa7.95□□□□□ -1.14
TTC28-203ENST00000442232 C9orf85Q96MD7 179 aa7.95□□□□□ -1.14
TTC28-203ENST00000442232 Q9HAA7 133 aa7.95□□□□□ -1.14
TTC28-203ENST00000442232 FXYD6-FXYD2A0A087WZ82 144 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms