RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 RITA1Q96K30 269 aa10.08□□□□□ -0.8
BRPF3-203ENST00000441123 TRAV13-1A0A0B4J241 112 aa10.07□□□□□ -0.8
BRPF3-203ENST00000441123 AZU1P20160 251 aa10.07□□□□□ -0.8
BRPF3-203ENST00000441123 JPT2Q9H910 190 aa10.07□□□□□ -0.8
BRPF3-203ENST00000441123 DKK2Q9UBU2 259 aa10.07□□□□□ -0.8
BRPF3-203ENST00000441123 FBXL19-AS1Q494R0 122 aa10.07□□□□□ -0.8
BRPF3-203ENST00000441123 ZNF407Q9C0G0 2248 aa10.07□□□□□ -0.8
BRPF3-203ENST00000441123 NCKAP5O14513 1909 aa10.07□□□□□ -0.8
BRPF3-203ENST00000441123 C16orf54Q6UWD8 224 aa10.07□□□□□ -0.8
BRPF3-203ENST00000441123 SCRT2Q9NQ03 307 aa10.07□□□□□ -0.8
BRPF3-203ENST00000441123 GATD1Q8NB37 220 aa10.07□□□□□ -0.8
BRPF3-203ENST00000441123 DEFB104AQ8WTQ1 72 aa10.07□□□□□ -0.8
BRPF3-203ENST00000441123 NUPR1O60356 82 aa10.06□□□□□ -0.8
BRPF3-203ENST00000441123 CGB3P0DN86 165 aa10.06□□□□□ -0.8
BRPF3-203ENST00000441123 CGB7P0DN87 165 aa10.06□□□□□ -0.8
BRPF3-203ENST00000441123 Q6ZPA2 131 aa10.06□□□□□ -0.8
BRPF3-203ENST00000441123 Q96MF0 132 aa10.06□□□□□ -0.8
BRPF3-203ENST00000441123 PRO1854Q9UHT4 67 aa10.06□□□□□ -0.8
BRPF3-203ENST00000441123 H3BMM0 161 aa10.06□□□□□ -0.8
BRPF3-203ENST00000441123 J3QKU1 62 aa10.06□□□□□ -0.8
BRPF3-203ENST00000441123 HERVK_113P63121 156 aa10.06□□□□□ -0.8
BRPF3-203ENST00000441123 UBE2WQ96B02 151 aa10.06□□□□□ -0.8
BRPF3-203ENST00000441123 FSTL3O95633 263 aa10.06□□□□□ -0.8
BRPF3-203ENST00000441123 IGKV1OR2-108A0A075B7D4 117 aa10.06□□□□□ -0.8
BRPF3-203ENST00000441123 J3QQQ9 107 aa10.06□□□□□ -0.8
BRPF3-203ENST00000441123 DEFB130BP0DP73 79 aa10.06□□□□□ -0.8
BRPF3-203ENST00000441123 DEFB130AP0DP74 79 aa10.06□□□□□ -0.8
BRPF3-203ENST00000441123 MAJINQ3KP22 176 aa10.06□□□□□ -0.8
BRPF3-203ENST00000441123 INAFM2P0DMQ5 153 aa10.06□□□□□ -0.8
BRPF3-203ENST00000441123 HLA-DMBP28068 263 aa10.06□□□□□ -0.8
BRPF3-203ENST00000441123 ASPHD1Q5U4P2 390 aa10.06□□□□□ -0.8
BRPF3-203ENST00000441123 BUB3O43684 328 aa10.05□□□□□ -0.8
BRPF3-203ENST00000441123 CTRLP40313 264 aa10.05□□□□□ -0.8
BRPF3-203ENST00000441123 VPREB3Q9UKI3 123 aa10.05□□□□□ -0.8
BRPF3-203ENST00000441123 C9orf47Q6ZRZ4 202 aa10.05□□□□□ -0.8
BRPF3-203ENST00000441123 GTSF1Q8WW33 167 aa10.05□□□□□ -0.8
BRPF3-203ENST00000441123 TMEM243Q9BU79 118 aa10.05□□□□□ -0.8
BRPF3-203ENST00000441123 TRAV8-3A0A0A6YYJ7 113 aa10.05□□□□□ -0.8
BRPF3-203ENST00000441123 SPINK8P0C7L1 97 aa10.05□□□□□ -0.8
BRPF3-203ENST00000441123 GTSF1LQ9H1H1 148 aa10.05□□□□□ -0.8
BRPF3-203ENST00000441123 GPR179Q6PRD1 2367 aa10.05□□□□□ -0.8
BRPF3-203ENST00000441123 C19orf71A6NCJ1 209 aa10.05□□□□□ -0.8
BRPF3-203ENST00000441123 Q8N9W7 124 aa10.05□□□□□ -0.8
BRPF3-203ENST00000441123 NDUFA12Q9UI09 145 aa10.05□□□□□ -0.8
BRPF3-203ENST00000441123 MYO7BQ6PIF6 2116 aa10.05□□□□□ -0.8
BRPF3-203ENST00000441123 ADAMTS9Q9P2N4 1935 aa10.04□□□□□ -0.8
BRPF3-203ENST00000441123 TRAV12-1A0A0B4J245 112 aa10.04□□□□□ -0.8
BRPF3-203ENST00000441123 TMEM89A2RUT3 159 aa10.04□□□□□ -0.8
BRPF3-203ENST00000441123 ZNF295-AS1Q8N0V1 137 aa10.04□□□□□ -0.8
BRPF3-203ENST00000441123 XCL2Q9UBD3 114 aa10.04□□□□□ -0.8
BRPF3-203ENST00000441123 C12orf74Q32Q52 190 aa10.04□□□□□ -0.8
BRPF3-203ENST00000441123 ROS1P08922 2347 aa10.04□□□□□ -0.8
BRPF3-203ENST00000441123 TCF15Q12870 199 aa10.04□□□□□ -0.8
BRPF3-203ENST00000441123 DAZAP2Q15038 168 aaPredicted RBP10.04□□□□□ -0.8
BRPF3-203ENST00000441123 ABCA1O95477 2261 aa10.03□□□□□ -0.8
BRPF3-203ENST00000441123 TRAV12-2A0A075B6T6 113 aa10.03□□□□□ -0.8
BRPF3-203ENST00000441123 PRSS29PA6NIE9 313 aa10.03□□□□□ -0.8
BRPF3-203ENST00000441123 HIGD1BQ9P298 99 aa10.03□□□□□ -0.8
BRPF3-203ENST00000441123 C5orf56Q8N8D9 126 aa10.03□□□□□ -0.8
BRPF3-203ENST00000441123 KNCNA6PVL3 124 aa10.03□□□□□ -0.8
BRPF3-203ENST00000441123 GAGE12JA6NER3 117 aa10.03□□□□□ -0.8
BRPF3-203ENST00000441123 K7EMT4 169 aa10.03□□□□□ -0.8
BRPF3-203ENST00000441123 GAGE4Q13068 117 aa10.03□□□□□ -0.8
BRPF3-203ENST00000441123 GAGE5Q13069 117 aa10.03□□□□□ -0.8
BRPF3-203ENST00000441123 GRNP28799 593 aaKnown RBP10.02□□□□□ -0.8
BRPF3-203ENST00000441123 PRSS47A8MTI9 375 aa10.02□□□□□ -0.81
BRPF3-203ENST00000441123 BRWD1-AS2P59051 145 aa10.02□□□□□ -0.81
BRPF3-203ENST00000441123 MSMPQ1L6U9 139 aa10.02□□□□□ -0.81
BRPF3-203ENST00000441123 Q71RC1 249 aaPredicted RBP10.02□□□□□ -0.81
BRPF3-203ENST00000441123 UTF1Q5T230 341 aa10.02□□□□□ -0.81
BRPF3-203ENST00000441123 Q8N7P7 452 aa10.02□□□□□ -0.81
BRPF3-203ENST00000441123 ZNRF2Q8NHG8 242 aa10.02□□□□□ -0.81
BRPF3-203ENST00000441123 ZNF503Q96F45 646 aa10.01□□□□□ -0.81
BRPF3-203ENST00000441123 IGKV1D-37A0A075B6S9 117 aa10.01□□□□□ -0.81
BRPF3-203ENST00000441123 GNRH2O43555 120 aa10.01□□□□□ -0.81
BRPF3-203ENST00000441123 SPTAN1Q13813 2472 aaKnown RBP10.01□□□□□ -0.81
BRPF3-203ENST00000441123 DOCK11Q5JSL3 2073 aa10.01□□□□□ -0.81
BRPF3-203ENST00000441123 DIDO1Q9BTC0 2240 aaKnown RBP10.01□□□□□ -0.81
BRPF3-203ENST00000441123 TRAV13-2A0A0B4J235 113 aa10.01□□□□□ -0.81
BRPF3-203ENST00000441123 FGF6P10767 208 aa10.01□□□□□ -0.81
BRPF3-203ENST00000441123 ADORA2A-AS1P86434 159 aa10.01□□□□□ -0.81
BRPF3-203ENST00000441123 A0A1B0GXF2 115 aa10□□□□□ -0.81
BRPF3-203ENST00000441123 DEFB112Q30KQ8 113 aa10□□□□□ -0.81
BRPF3-203ENST00000441123 YPEL4Q96NS1 127 aa10□□□□□ -0.81
BRPF3-203ENST00000441123 NBASA2RRP1 2371 aa10□□□□□ -0.81
BRPF3-203ENST00000441123 CADP27708 2225 aa10□□□□□ -0.81
BRPF3-203ENST00000441123 HOXD3P31249 432 aaPredicted RBP10□□□□□ -0.81
BRPF3-203ENST00000441123 SIRPDQ9H106 197 aa10□□□□□ -0.81
BRPF3-203ENST00000441123 E7EUB6 86 aa9.99□□□□□ -0.81
BRPF3-203ENST00000441123 CDK2AP2O75956 126 aa9.99□□□□□ -0.81
BRPF3-203ENST00000441123 SUMO4Q6EEV6 95 aa9.99□□□□□ -0.81
BRPF3-203ENST00000441123 C10orf105Q8TEF2 133 aa9.99□□□□□ -0.81
BRPF3-203ENST00000441123 TSSC4Q9Y5U2 329 aaPredicted RBP9.99□□□□□ -0.81
BRPF3-203ENST00000441123 APOC4P55056 127 aa9.99□□□□□ -0.81
BRPF3-203ENST00000441123 MRPL36Q9P0J6 103 aaKnown RBP9.99□□□□□ -0.81
BRPF3-203ENST00000441123 LAMTOR3Q9UHA4 124 aa9.99□□□□□ -0.81
BRPF3-203ENST00000441123 IGHV3-16A0A0C4DH30 117 aa9.98□□□□□ -0.81
BRPF3-203ENST00000441123 F5H768 121 aa9.98□□□□□ -0.81
BRPF3-203ENST00000441123 ODF3BA8MYP8 253 aa9.98□□□□□ -0.81
BRPF3-203ENST00000441123 IGLV2-8P01709 118 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms