RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 IBA57Q5T440 356 aaKnown RBP12.74□□□□□ -0.37
CPSF4-205ENST00000440514 TRBV6-1A0A0K0K1D8 114 aa12.73□□□□□ -0.37
CPSF4-205ENST00000440514 GCGP01275 180 aa12.73□□□□□ -0.37
CPSF4-205ENST00000440514 ATP5G1P05496 136 aa12.73□□□□□ -0.37
CPSF4-205ENST00000440514 ZNF415Q09FC8 603 aa12.73□□□□□ -0.37
CPSF4-205ENST00000440514 TMEM183BQ1AE95 376 aa12.73□□□□□ -0.37
CPSF4-205ENST00000440514 TMEM183AQ8IXX5 376 aa12.73□□□□□ -0.37
CPSF4-205ENST00000440514 TRGV11A0A075B6L2 103 aa12.72□□□□□ -0.37
CPSF4-205ENST00000440514 TRGV1A0A0A0MS02 117 aa12.72□□□□□ -0.37
CPSF4-205ENST00000440514 TMEM88Q6PEY1 159 aa12.72□□□□□ -0.37
CPSF4-205ENST00000440514 NDUFAF3Q9BU61 184 aa12.72□□□□□ -0.37
CPSF4-205ENST00000440514 MRPL16Q9NX20 251 aaKnown RBP12.72□□□□□ -0.37
CPSF4-205ENST00000440514 MDFICQ9P1T7 246 aa12.72□□□□□ -0.37
CPSF4-205ENST00000440514 GNG13Q9P2W3 67 aa12.72□□□□□ -0.37
CPSF4-205ENST00000440514 BOLA1Q9Y3E2 137 aa12.72□□□□□ -0.37
CPSF4-205ENST00000440514 HYDINQ4G0P3 5121 aa12.71□□□□□ -0.37
CPSF4-205ENST00000440514 SCO2A0A1W2PP80 73 aa12.71□□□□□ -0.37
CPSF4-205ENST00000440514 F5H768 121 aa12.71□□□□□ -0.37
CPSF4-205ENST00000440514 PDE6DO43924 150 aa12.71□□□□□ -0.37
CPSF4-205ENST00000440514 AKR1C3P42330 323 aa12.71□□□□□ -0.37
CPSF4-205ENST00000440514 TDRG1Q3Y452 100 aa12.71□□□□□ -0.37
CPSF4-205ENST00000440514 ALKAL2Q6UX46 152 aa12.71□□□□□ -0.37
CPSF4-205ENST00000440514 FAM210BQ96KR6 192 aa12.71□□□□□ -0.37
CPSF4-205ENST00000440514 C11orf21Q9P2W6 132 aa12.71□□□□□ -0.37
CPSF4-205ENST00000440514 SPINK4O60575 86 aa12.7□□□□□ -0.38
CPSF4-205ENST00000440514 TYMSP04818 313 aa12.7□□□□□ -0.38
CPSF4-205ENST00000440514 LGALS9CQ6DKI2 356 aa12.7□□□□□ -0.38
CPSF4-205ENST00000440514 GNRH2O43555 120 aa12.69□□□□□ -0.38
CPSF4-205ENST00000440514 PFN1P07737 140 aaKnown RBP12.69□□□□□ -0.38
CPSF4-205ENST00000440514 SDF2L1Q9HCN8 221 aa12.69□□□□□ -0.38
CPSF4-205ENST00000440514 VAX2Q9UIW0 290 aa12.69□□□□□ -0.38
CPSF4-205ENST00000440514 TRGV2A0A075B6R0 118 aa12.68□□□□□ -0.38
CPSF4-205ENST00000440514 IGHV3-16A0A0C4DH30 117 aa12.68□□□□□ -0.38
CPSF4-205ENST00000440514 FABP5P3A8MUU1 101 aa12.68□□□□□ -0.38
CPSF4-205ENST00000440514 MEF2BQ02080 365 aaPredicted RBP12.68□□□□□ -0.38
CPSF4-205ENST00000440514 LGALS9BQ3B8N2 356 aa12.68□□□□□ -0.38
CPSF4-205ENST00000440514 COX8CQ7Z4L0 72 aa12.68□□□□□ -0.38
CPSF4-205ENST00000440514 ZC2HC1AQ96GY0 325 aa12.68□□□□□ -0.38
CPSF4-205ENST00000440514 SPXQ9BT56 116 aa12.68□□□□□ -0.38
CPSF4-205ENST00000440514 BCL2P10415 239 aa12.67□□□□□ -0.38
CPSF4-205ENST00000440514 HOXA5P20719 270 aa12.67□□□□□ -0.38
CPSF4-205ENST00000440514 LTAP01374 205 aa12.66□□□□□ -0.38
CPSF4-205ENST00000440514 NHLRC2Q8NBF2 726 aa12.66□□□□□ -0.38
CPSF4-205ENST00000440514 SMIM12Q96EX1 92 aa12.66□□□□□ -0.38
CPSF4-205ENST00000440514 NDUFS6O75380 124 aaKnown RBP12.65□□□□□ -0.38
CPSF4-205ENST00000440514 IGHV3-53P01767 116 aa12.65□□□□□ -0.38
CPSF4-205ENST00000440514 OR5I1Q13606 314 aa12.65□□□□□ -0.38
CPSF4-205ENST00000440514 LYPD6BQ8NI32 183 aa12.65□□□□□ -0.38
CPSF4-205ENST00000440514 C11orf52Q96A22 123 aa12.65□□□□□ -0.38
CPSF4-205ENST00000440514 C18orf15Q96N68 181 aa12.65□□□□□ -0.38
CPSF4-205ENST00000440514 BIN3Q9NQY0 253 aa12.65□□□□□ -0.38
CPSF4-205ENST00000440514 FAM162BQ5T6X4 162 aa12.64□□□□□ -0.39
CPSF4-205ENST00000440514 TEX261Q6UWH6 196 aa12.64□□□□□ -0.39
CPSF4-205ENST00000440514 TRAV26-1A0A087WT03 109 aa12.63□□□□□ -0.39
CPSF4-205ENST00000440514 IGKV3D-20A0A0C4DH25 116 aa12.63□□□□□ -0.39
CPSF4-205ENST00000440514 A0A0J9YY99 117 aa12.63□□□□□ -0.39
CPSF4-205ENST00000440514 SH2D1AO60880 128 aa12.63□□□□□ -0.39
CPSF4-205ENST00000440514 CRIP1P50238 77 aa12.63□□□□□ -0.39
CPSF4-205ENST00000440514 BAGE2Q86Y30 109 aa12.63□□□□□ -0.39
CPSF4-205ENST00000440514 C15orf53Q8NAA6 179 aa12.63□□□□□ -0.39
CPSF4-205ENST00000440514 DERL1Q9BUN8 251 aa12.63□□□□□ -0.39
CPSF4-205ENST00000440514 VPS13DQ5THJ4 4388 aa12.63□□□□□ -0.39
CPSF4-205ENST00000440514 NUDT3O95989 172 aa12.62□□□□□ -0.39
CPSF4-205ENST00000440514 MED9Q9NWA0 146 aa12.62□□□□□ -0.39
CPSF4-205ENST00000440514 M0R036 132 aa12.61□□□□□ -0.39
CPSF4-205ENST00000440514 M0R2P5 195 aa12.61□□□□□ -0.39
CPSF4-205ENST00000440514 P0DMU3 169 aa12.61□□□□□ -0.39
CPSF4-205ENST00000440514 FAM231AP0DMU4 169 aa12.61□□□□□ -0.39
CPSF4-205ENST00000440514 FAM231CP0DMU5 169 aa12.61□□□□□ -0.39
CPSF4-205ENST00000440514 RPL35P42766 123 aaKnown RBP12.61□□□□□ -0.39
CPSF4-205ENST00000440514 SLAQ13239 276 aa12.61□□□□□ -0.39
CPSF4-205ENST00000440514 RBFOX3A6NFN3 312 aa12.6□□□□□ -0.39
CPSF4-205ENST00000440514 B4DEV8 164 aa12.6□□□□□ -0.39
CPSF4-205ENST00000440514 TMEM250H0YL14 139 aa12.6□□□□□ -0.39
CPSF4-205ENST00000440514 CIDEAO60543 219 aa12.6□□□□□ -0.39
CPSF4-205ENST00000440514 ORM1P02763 201 aa12.6□□□□□ -0.39
CPSF4-205ENST00000440514 SFTA3P0C7M3 94 aa12.6□□□□□ -0.39
CPSF4-205ENST00000440514 RNASE3P12724 160 aaKnown RBP12.6□□□□□ -0.39
CPSF4-205ENST00000440514 ZNF674Q2M3X9 581 aa12.6□□□□□ -0.39
CPSF4-205ENST00000440514 UBE2DNLQ8IWF7 75 aa12.6□□□□□ -0.39
CPSF4-205ENST00000440514 RASL10AQ92737 203 aa12.6□□□□□ -0.39
CPSF4-205ENST00000440514 C9orf85Q96MD7 179 aa12.6□□□□□ -0.39
CPSF4-205ENST00000440514 MUC4Q99102 2169 aa12.6□□□□□ -0.39
CPSF4-205ENST00000440514 S100A4P26447 101 aaKnown RBP12.59□□□□□ -0.39
CPSF4-205ENST00000440514 GNG4P50150 75 aa12.59□□□□□ -0.39
CPSF4-205ENST00000440514 VSIG2Q96IQ7 327 aa12.59□□□□□ -0.39
CPSF4-205ENST00000440514 ZNF479Q96JC4 524 aa12.59□□□□□ -0.39
CPSF4-205ENST00000440514 DNAH6Q9C0G6 4158 aa12.59□□□□□ -0.39
CPSF4-205ENST00000440514 TMSB15BA0A087X1C1 80 aa12.58□□□□□ -0.4
CPSF4-205ENST00000440514 KRBOX1C9JBD0 128 aa12.58□□□□□ -0.4
CPSF4-205ENST00000440514 C9JCJ5 164 aa12.58□□□□□ -0.4
CPSF4-205ENST00000440514 ASIPP42127 132 aa12.58□□□□□ -0.4
CPSF4-205ENST00000440514 RAB14P61106 215 aa12.58□□□□□ -0.4
CPSF4-205ENST00000440514 CENPWQ5EE01 88 aa12.58□□□□□ -0.4
CPSF4-205ENST00000440514 POM121L12Q8N7R1 296 aa12.58□□□□□ -0.4
CPSF4-205ENST00000440514 PTH2Q96A98 100 aa12.58□□□□□ -0.4
CPSF4-205ENST00000440514 MLST8Q9BVC4 326 aa12.58□□□□□ -0.4
CPSF4-205ENST00000440514 EIF5A2Q9GZV4 153 aaKnown RBP12.58□□□□□ -0.4
CPSF4-205ENST00000440514 SMDT1Q9H4I9 107 aa12.58□□□□□ -0.4
CPSF4-205ENST00000440514 KMT2AQ03164 3969 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms