RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 GNG13Q9P2W3 67 aa8.36□□□□□ -1.07
HSPG2-206ENST00000439717 NAGKQ9UJ70 344 aa8.36□□□□□ -1.07
HSPG2-206ENST00000439717 GAGE12BA1L429 117 aa8.35□□□□□ -1.07
HSPG2-206ENST00000439717 GAGE7O76087 117 aa8.35□□□□□ -1.07
HSPG2-206ENST00000439717 IFNA1P01562 189 aa8.35□□□□□ -1.07
HSPG2-206ENST00000439717 GAGE12FP0CL80 117 aa8.35□□□□□ -1.07
HSPG2-206ENST00000439717 GAGE12GP0CL81 117 aa8.35□□□□□ -1.07
HSPG2-206ENST00000439717 GAGE12IP0CL82 117 aa8.35□□□□□ -1.07
HSPG2-206ENST00000439717 AKR1C3P42330 323 aa8.35□□□□□ -1.07
HSPG2-206ENST00000439717 ZNF80P51504 273 aaPredicted RBP8.35□□□□□ -1.07
HSPG2-206ENST00000439717 LGALS9CQ6DKI2 356 aa8.35□□□□□ -1.07
HSPG2-206ENST00000439717 ALKAL2Q6UX46 152 aa8.35□□□□□ -1.07
HSPG2-206ENST00000439717 TMEM183AQ8IXX5 376 aa8.35□□□□□ -1.07
HSPG2-206ENST00000439717 SPXQ9BT56 116 aa8.35□□□□□ -1.07
HSPG2-206ENST00000439717 MDFICQ9P1T7 246 aa8.35□□□□□ -1.07
HSPG2-206ENST00000439717 TRGV1A0A0A0MS02 117 aa8.34□□□□□ -1.07
HSPG2-206ENST00000439717 FABP5P3A8MUU1 101 aa8.34□□□□□ -1.07
HSPG2-206ENST00000439717 F5H768 121 aa8.34□□□□□ -1.07
HSPG2-206ENST00000439717 LTAP01374 205 aa8.34□□□□□ -1.07
HSPG2-206ENST00000439717 TAGLN2P37802 199 aaKnown RBP8.34□□□□□ -1.07
HSPG2-206ENST00000439717 BLOC1S1P78537 153 aa8.34□□□□□ -1.07
HSPG2-206ENST00000439717 Q6ZTI0 123 aa8.34□□□□□ -1.07
HSPG2-206ENST00000439717 BOLA1Q9Y3E2 137 aa8.34□□□□□ -1.07
HSPG2-206ENST00000439717 DNAH1Q9P2D7 4330 aa8.33□□□□□ -1.08
HSPG2-206ENST00000439717 TRGV2A0A075B6R0 118 aa8.33□□□□□ -1.08
HSPG2-206ENST00000439717 IGHV3-16A0A0C4DH30 117 aa8.33□□□□□ -1.08
HSPG2-206ENST00000439717 SCO2A0A1W2PP80 73 aa8.33□□□□□ -1.08
HSPG2-206ENST00000439717 GNRH2O43555 120 aa8.33□□□□□ -1.08
HSPG2-206ENST00000439717 LY6G6CO95867 125 aa8.33□□□□□ -1.08
HSPG2-206ENST00000439717 TYMSP04818 313 aa8.33□□□□□ -1.08
HSPG2-206ENST00000439717 TMEM88Q6PEY1 159 aa8.33□□□□□ -1.08
HSPG2-206ENST00000439717 PDE6DO43924 150 aa8.32□□□□□ -1.08
HSPG2-206ENST00000439717 BCL2P10415 239 aa8.32□□□□□ -1.08
HSPG2-206ENST00000439717 MEF2BQ02080 365 aaPredicted RBP8.32□□□□□ -1.08
HSPG2-206ENST00000439717 C15orf53Q8NAA6 179 aa8.32□□□□□ -1.08
HSPG2-206ENST00000439717 C11orf52Q96A22 123 aa8.32□□□□□ -1.08
HSPG2-206ENST00000439717 ZC2HC1AQ96GY0 325 aa8.32□□□□□ -1.08
HSPG2-206ENST00000439717 C11orf21Q9P2W6 132 aa8.32□□□□□ -1.08
HSPG2-206ENST00000439717 VAX2Q9UIW0 290 aa8.32□□□□□ -1.08
HSPG2-206ENST00000439717 SACSQ9NZJ4 4579 aa8.31□□□□□ -1.08
HSPG2-206ENST00000439717 FAM162BQ5T6X4 162 aa8.31□□□□□ -1.08
HSPG2-206ENST00000439717 LYPD6BQ8NI32 183 aa8.31□□□□□ -1.08
HSPG2-206ENST00000439717 RASL10AQ92737 203 aa8.31□□□□□ -1.08
HSPG2-206ENST00000439717 MRPL16Q9NX20 251 aaKnown RBP8.31□□□□□ -1.08
HSPG2-206ENST00000439717 IGKV3D-20A0A0C4DH25 116 aa8.3□□□□□ -1.08
HSPG2-206ENST00000439717 M0R2P5 195 aa8.3□□□□□ -1.08
HSPG2-206ENST00000439717 P0DMU3 169 aa8.3□□□□□ -1.08
HSPG2-206ENST00000439717 FAM231AP0DMU4 169 aa8.3□□□□□ -1.08
HSPG2-206ENST00000439717 FAM231CP0DMU5 169 aa8.3□□□□□ -1.08
HSPG2-206ENST00000439717 RPL35P42766 123 aaKnown RBP8.3□□□□□ -1.08
HSPG2-206ENST00000439717 CRIP1P50238 77 aa8.3□□□□□ -1.08
HSPG2-206ENST00000439717 OR5I1Q13606 314 aa8.3□□□□□ -1.08
HSPG2-206ENST00000439717 ZNF674Q2M3X9 581 aa8.3□□□□□ -1.08
HSPG2-206ENST00000439717 BAGE2Q86Y30 109 aa8.3□□□□□ -1.08
HSPG2-206ENST00000439717 MLST8Q9BVC4 326 aa8.3□□□□□ -1.08
HSPG2-206ENST00000439717 H3BNG1 76 aa8.29□□□□□ -1.08
HSPG2-206ENST00000439717 SH2D1AO60880 128 aa8.29□□□□□ -1.08
HSPG2-206ENST00000439717 ORM1P02763 201 aa8.29□□□□□ -1.08
HSPG2-206ENST00000439717 HOXA5P20719 270 aa8.29□□□□□ -1.08
HSPG2-206ENST00000439717 SLAQ13239 276 aa8.29□□□□□ -1.08
HSPG2-206ENST00000439717 PTH2Q96A98 100 aa8.29□□□□□ -1.08
HSPG2-206ENST00000439717 C9orf85Q96MD7 179 aa8.29□□□□□ -1.08
HSPG2-206ENST00000439717 B4DEV8 164 aa8.28□□□□□ -1.08
HSPG2-206ENST00000439717 KRBOX1C9JBD0 128 aa8.28□□□□□ -1.08
HSPG2-206ENST00000439717 ASIPP42127 132 aa8.28□□□□□ -1.08
HSPG2-206ENST00000439717 DNLZQ5SXM8 178 aa8.28□□□□□ -1.08
HSPG2-206ENST00000439717 SMIM12Q96EX1 92 aa8.28□□□□□ -1.08
HSPG2-206ENST00000439717 TRAV26-1A0A087WT03 109 aa8.27□□□□□ -1.09
HSPG2-206ENST00000439717 TRAV4A0A0B4J268 109 aa8.27□□□□□ -1.09
HSPG2-206ENST00000439717 RBFOX3A6NFN3 312 aa8.27□□□□□ -1.09
HSPG2-206ENST00000439717 RNASE3P12724 160 aaKnown RBP8.27□□□□□ -1.09
HSPG2-206ENST00000439717 S100A4P26447 101 aaKnown RBP8.27□□□□□ -1.09
HSPG2-206ENST00000439717 LINC01559Q495D7 138 aa8.27□□□□□ -1.09
HSPG2-206ENST00000439717 TEX261Q6UWH6 196 aa8.27□□□□□ -1.09
HSPG2-206ENST00000439717 NHLRC2Q8NBF2 726 aa8.27□□□□□ -1.09
HSPG2-206ENST00000439717 DERL1Q9BUN8 251 aa8.27□□□□□ -1.09
HSPG2-206ENST00000439717 MED9Q9NWA0 146 aa8.27□□□□□ -1.09
HSPG2-206ENST00000439717 RYR3Q15413 4870 aa8.26□□□□□ -1.09
HSPG2-206ENST00000439717 CIDEAO60543 219 aa8.26□□□□□ -1.09
HSPG2-206ENST00000439717 NUDT3O95989 172 aa8.26□□□□□ -1.09
HSPG2-206ENST00000439717 GNG4P50150 75 aa8.26□□□□□ -1.09
HSPG2-206ENST00000439717 FHL2Q14192 279 aa8.26□□□□□ -1.09
HSPG2-206ENST00000439717 RNF212Q495C1 297 aa8.26□□□□□ -1.09
HSPG2-206ENST00000439717 ZNF876PQ49A33 203 aa8.26□□□□□ -1.09
HSPG2-206ENST00000439717 CENPWQ5EE01 88 aa8.26□□□□□ -1.09
HSPG2-206ENST00000439717 PIK3CD-AS1Q5SR53 167 aa8.26□□□□□ -1.09
HSPG2-206ENST00000439717 POM121L12Q8N7R1 296 aa8.26□□□□□ -1.09
HSPG2-206ENST00000439717 OR4C5Q8NGB2 326 aa8.26□□□□□ -1.09
HSPG2-206ENST00000439717 IL36BQ9NZH7 164 aa8.26□□□□□ -1.09
HSPG2-206ENST00000439717 PRO0255Q9UI72 69 aa8.26□□□□□ -1.09
HSPG2-206ENST00000439717 RYR2Q92736 4967 aa8.26□□□□□ -1.09
HSPG2-206ENST00000439717 A0A0J9YY99 117 aa8.25□□□□□ -1.09
HSPG2-206ENST00000439717 C9JCJ5 164 aa8.25□□□□□ -1.09
HSPG2-206ENST00000439717 TMEM250H0YL14 139 aa8.25□□□□□ -1.09
HSPG2-206ENST00000439717 M0R036 132 aa8.25□□□□□ -1.09
HSPG2-206ENST00000439717 NDUFS6O75380 124 aaKnown RBP8.25□□□□□ -1.09
HSPG2-206ENST00000439717 IGHV3-53P01767 116 aa8.25□□□□□ -1.09
HSPG2-206ENST00000439717 CXCL1P09341 107 aa8.25□□□□□ -1.09
HSPG2-206ENST00000439717 ZNF506Q5JVG8 444 aa8.25□□□□□ -1.09
HSPG2-206ENST00000439717 ZNF479Q96JC4 524 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms