RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 EIF5AP63241 154 aaKnown RBP16.73■□□□□ 0.27
CPNE1-217ENST00000439669 SMUG1Q53HV7 270 aa16.73■□□□□ 0.27
CPNE1-217ENST00000439669 FAM213BQ8TBF2 198 aa16.73■□□□□ 0.27
CPNE1-217ENST00000439669 KCNS1Q96KK3 526 aa16.73■□□□□ 0.27
CPNE1-217ENST00000439669 NKX6-2Q9C056 277 aaPredicted RBP16.73■□□□□ 0.27
CPNE1-217ENST00000439669 IGHV3-16A0A0C4DH30 117 aa16.72■□□□□ 0.27
CPNE1-217ENST00000439669 TYMSP04818 313 aa16.72■□□□□ 0.27
CPNE1-217ENST00000439669 ZNF80P51504 273 aaPredicted RBP16.72■□□□□ 0.27
CPNE1-217ENST00000439669 TMUB2Q71RG4 321 aa16.72■□□□□ 0.27
CPNE1-217ENST00000439669 LINC00479Q96M42 142 aa16.72■□□□□ 0.27
CPNE1-217ENST00000439669 LINC00588Q9Y4M8 146 aa16.72■□□□□ 0.27
CPNE1-217ENST00000439669 UMAD1C9J7I0 102 aa16.71■□□□□ 0.27
CPNE1-217ENST00000439669 SAPCD1Q5SSQ6 148 aa16.71■□□□□ 0.27
CPNE1-217ENST00000439669 VSIG2Q96IQ7 327 aa16.71■□□□□ 0.27
CPNE1-217ENST00000439669 MUC4Q99102 2169 aa16.71■□□□□ 0.27
CPNE1-217ENST00000439669 BIRC6Q9NR09 4857 aa16.7■□□□□ 0.26
CPNE1-217ENST00000439669 PFN1P07737 140 aaKnown RBP16.7■□□□□ 0.26
CPNE1-217ENST00000439669 CST9LP1Q5W188 147 aa16.7■□□□□ 0.26
CPNE1-217ENST00000439669 HIST1H2BAQ96A08 127 aa16.7■□□□□ 0.26
CPNE1-217ENST00000439669 A0A1B0GV50 99 aa16.69■□□□□ 0.26
CPNE1-217ENST00000439669 PAX4O43316 350 aa16.69■□□□□ 0.26
CPNE1-217ENST00000439669 TPT1P13693 172 aaKnown RBP16.69■□□□□ 0.26
CPNE1-217ENST00000439669 Q6ZR54 194 aa16.69■□□□□ 0.26
CPNE1-217ENST00000439669 ZNRF2Q8NHG8 242 aa16.69■□□□□ 0.26
CPNE1-217ENST00000439669 SFT2D1Q8WV19 159 aa16.69■□□□□ 0.26
CPNE1-217ENST00000439669 RASL10AQ92737 203 aa16.69■□□□□ 0.26
CPNE1-217ENST00000439669 ARL2-SNX15V9GYD0 113 aa16.69■□□□□ 0.26
CPNE1-217ENST00000439669 M0R2P5 195 aa16.68■□□□□ 0.26
CPNE1-217ENST00000439669 SFTA3P0C7M3 94 aa16.68■□□□□ 0.26
CPNE1-217ENST00000439669 LINC00336Q6ZUF6 198 aa16.68■□□□□ 0.26
CPNE1-217ENST00000439669 Q86TA4 180 aa16.68■□□□□ 0.26
CPNE1-217ENST00000439669 C11orf21Q9P2W6 132 aa16.68■□□□□ 0.26
CPNE1-217ENST00000439669 PRO0255Q9UI72 69 aa16.68■□□□□ 0.26
CPNE1-217ENST00000439669 A0A096LPF7 62 aa16.67■□□□□ 0.26
CPNE1-217ENST00000439669 TRGV4A0A0C4DH28 118 aa16.67■□□□□ 0.26
CPNE1-217ENST00000439669 SLAQ13239 276 aa16.67■□□□□ 0.26
CPNE1-217ENST00000439669 TCTE3Q8IZS6 198 aa16.67■□□□□ 0.26
CPNE1-217ENST00000439669 FHL2Q14192 279 aa16.66■□□□□ 0.26
CPNE1-217ENST00000439669 DPPA3Q6W0C5 159 aa16.66■□□□□ 0.26
CPNE1-217ENST00000439669 Q6ZNX1 250 aa16.66■□□□□ 0.26
CPNE1-217ENST00000439669 MBD3L1Q8WWY6 194 aa16.66■□□□□ 0.26
CPNE1-217ENST00000439669 ZNF479Q96JC4 524 aa16.66■□□□□ 0.26
CPNE1-217ENST00000439669 HHLA3Q9XRX5 114 aa16.66■□□□□ 0.26
CPNE1-217ENST00000439669 ICOSQ9Y6W8 199 aa16.66■□□□□ 0.26
CPNE1-217ENST00000439669 DNAH10Q8IVF4 4471 aa16.65■□□□□ 0.26
CPNE1-217ENST00000439669 CRYBA4P53673 196 aa16.65■□□□□ 0.26
CPNE1-217ENST00000439669 UBE2G1P62253 170 aa16.65■□□□□ 0.26
CPNE1-217ENST00000439669 ESRGQ1W209 222 aa16.65■□□□□ 0.26
CPNE1-217ENST00000439669 RTL8CO15255 209 aa16.64■□□□□ 0.25
CPNE1-217ENST00000439669 PAGE4O60829 102 aa16.64■□□□□ 0.25
CPNE1-217ENST00000439669 TCEAL7Q9BRU2 100 aa16.64■□□□□ 0.25
CPNE1-217ENST00000439669 TRAV4A0A0B4J268 109 aa16.63■□□□□ 0.25
CPNE1-217ENST00000439669 NBDYA0A0U1RRE5 68 aa16.63■□□□□ 0.25
CPNE1-217ENST00000439669 H2AFB1P0C5Y9 115 aa16.63■□□□□ 0.25
CPNE1-217ENST00000439669 AKR1C3P42330 323 aa16.63■□□□□ 0.25
CPNE1-217ENST00000439669 SOHLH1Q5JUK2 328 aa16.63■□□□□ 0.25
CPNE1-217ENST00000439669 OR4C5Q8NGB2 326 aa16.63■□□□□ 0.25
CPNE1-217ENST00000439669 FMC1Q96HJ9 113 aa16.63■□□□□ 0.25
CPNE1-217ENST00000439669 hCG_2014768A0A024R1R8 64 aa16.62■□□□□ 0.25
CPNE1-217ENST00000439669 C9JCJ5 164 aa16.62■□□□□ 0.25
CPNE1-217ENST00000439669 LGALSLQ3ZCW2 172 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-217ENST00000439669 C1orf134Q5TEV5 83 aa16.62■□□□□ 0.25
CPNE1-217ENST00000439669 MRPS16Q9Y3D3 137 aaKnown RBP16.62■□□□□ 0.25
CPNE1-217ENST00000439669 PRSS29PA6NIE9 313 aa16.61■□□□□ 0.25
CPNE1-217ENST00000439669 FABP5P3A8MUU1 101 aa16.61■□□□□ 0.25
CPNE1-217ENST00000439669 Q9H8V8 135 aa16.61■□□□□ 0.25
CPNE1-217ENST00000439669 ZFP30Q9Y2G7 519 aa16.61■□□□□ 0.25
CPNE1-217ENST00000439669 ZNF876PQ49A33 203 aa16.6■□□□□ 0.25
CPNE1-217ENST00000439669 EIF5AL1Q6IS14 154 aaKnown RBP16.6■□□□□ 0.25
CPNE1-217ENST00000439669 PCNPQ8WW12 178 aaKnown RBP16.6■□□□□ 0.25
CPNE1-217ENST00000439669 C9orf85Q96MD7 179 aa16.6■□□□□ 0.25
CPNE1-217ENST00000439669 UPK3BQ9BT76 320 aa16.6■□□□□ 0.25
CPNE1-217ENST00000439669 FRAS1Q86XX4 4008 aa16.59■□□□□ 0.25
CPNE1-217ENST00000439669 C1QBP02746 253 aa16.59■□□□□ 0.25
CPNE1-217ENST00000439669 MRPL23Q16540 153 aaKnown RBP16.59■□□□□ 0.25
CPNE1-217ENST00000439669 ZC2HC1AQ96GY0 325 aa16.59■□□□□ 0.25
CPNE1-217ENST00000439669 IGKV3D-20A0A0C4DH25 116 aa16.58■□□□□ 0.24
CPNE1-217ENST00000439669 ORM1P02763 201 aa16.58■□□□□ 0.24
CPNE1-217ENST00000439669 S100A4P26447 101 aaKnown RBP16.58■□□□□ 0.24
CPNE1-217ENST00000439669 AKAP14Q86UN6 197 aa16.58■□□□□ 0.24
CPNE1-217ENST00000439669 TRBV6-1A0A0K0K1D8 114 aa16.57■□□□□ 0.24
CPNE1-217ENST00000439669 RNASE3P12724 160 aaKnown RBP16.57■□□□□ 0.24
CPNE1-217ENST00000439669 GYPEP15421 78 aa16.57■□□□□ 0.24
CPNE1-217ENST00000439669 SCO2A0A1W2PP80 73 aa16.56■□□□□ 0.24
CPNE1-217ENST00000439669 B4DEV8 164 aa16.56■□□□□ 0.24
CPNE1-217ENST00000439669 SH2D1AO60880 128 aa16.56■□□□□ 0.24
CPNE1-217ENST00000439669 LTAP01374 205 aa16.56■□□□□ 0.24
CPNE1-217ENST00000439669 SRIP30626 198 aa16.56■□□□□ 0.24
CPNE1-217ENST00000439669 ASIPP42127 132 aa16.56■□□□□ 0.24
CPNE1-217ENST00000439669 RAB5CP51148 216 aa16.56■□□□□ 0.24
CPNE1-217ENST00000439669 TTC32Q5I0X7 151 aa16.56■□□□□ 0.24
CPNE1-217ENST00000439669 FAM162BQ5T6X4 162 aa16.56■□□□□ 0.24
CPNE1-217ENST00000439669 M0R036 132 aa16.55■□□□□ 0.24
CPNE1-217ENST00000439669 CRIP1P50238 77 aa16.55■□□□□ 0.24
CPNE1-217ENST00000439669 ZNF506Q5JVG8 444 aa16.55■□□□□ 0.24
CPNE1-217ENST00000439669 NEGR1Q7Z3B1 354 aa16.55■□□□□ 0.24
CPNE1-217ENST00000439669 COX8CQ7Z4L0 72 aa16.55■□□□□ 0.24
CPNE1-217ENST00000439669 PGPEP1LA6NFU8 196 aa16.54■□□□□ 0.24
CPNE1-217ENST00000439669 K7EQD1 137 aa16.54■□□□□ 0.24
CPNE1-217ENST00000439669 SLC51BQ86UW2 128 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms