RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 TMEM183BQ1AE95 376 aa5.31□□□□□ -1.56
VPS50-204ENST00000438395 PRR9Q5T870 116 aa5.31□□□□□ -1.56
VPS50-204ENST00000438395 SH2D6Q7Z4S9 175 aa5.31□□□□□ -1.56
VPS50-204ENST00000438395 TMEM183AQ8IXX5 376 aa5.31□□□□□ -1.56
VPS50-204ENST00000438395 LYPD1Q8N2G4 141 aa5.31□□□□□ -1.56
VPS50-204ENST00000438395 C10orf126Q8N4M7 172 aa5.31□□□□□ -1.56
VPS50-204ENST00000438395 NHLRC2Q8NBF2 726 aa5.31□□□□□ -1.56
VPS50-204ENST00000438395 SCGB1C1Q8TD33 95 aa5.31□□□□□ -1.56
VPS50-204ENST00000438395 S100ZQ8WXG8 99 aa5.31□□□□□ -1.56
VPS50-204ENST00000438395 FRZBQ92765 325 aa5.31□□□□□ -1.56
VPS50-204ENST00000438395 FAM167A-AS1Q96KT0 104 aa5.31□□□□□ -1.56
VPS50-204ENST00000438395 HYLS1Q96M11 299 aa5.31□□□□□ -1.56
VPS50-204ENST00000438395 ATP5SQ99766 215 aa5.31□□□□□ -1.56
VPS50-204ENST00000438395 MSRB1Q9NZV6 116 aa5.31□□□□□ -1.56
VPS50-204ENST00000438395 RPH3ALQ9UNE2 315 aa5.31□□□□□ -1.56
VPS50-204ENST00000438395 DNAH5Q8TE73 4624 aa5.31□□□□□ -1.56
VPS50-204ENST00000438395 SFTA3P0C7M3 94 aa5.3□□□□□ -1.56
VPS50-204ENST00000438395 ASAH1Q13510 395 aa5.3□□□□□ -1.56
VPS50-204ENST00000438395 FHL2Q14192 279 aa5.3□□□□□ -1.56
VPS50-204ENST00000438395 FFAR4Q5NUL3 377 aa5.3□□□□□ -1.56
VPS50-204ENST00000438395 LYPD5Q6UWN5 251 aa5.3□□□□□ -1.56
VPS50-204ENST00000438395 Q6ZRN7 208 aaPredicted RBP5.3□□□□□ -1.56
VPS50-204ENST00000438395 OR4C5Q8NGB2 326 aa5.3□□□□□ -1.56
VPS50-204ENST00000438395 FXYD5Q96DB9 178 aa5.3□□□□□ -1.56
VPS50-204ENST00000438395 NMES1Q9C002 83 aa5.3□□□□□ -1.56
VPS50-204ENST00000438395 WDR61Q9GZS3 305 aaKnown RBP5.3□□□□□ -1.56
VPS50-204ENST00000438395 LENEPQ9Y5L5 61 aa5.3□□□□□ -1.56
VPS50-204ENST00000438395 K7EQD1 137 aa5.29□□□□□ -1.56
VPS50-204ENST00000438395 SSNA1O43805 119 aa5.29□□□□□ -1.56
VPS50-204ENST00000438395 SIX6O95475 246 aa5.29□□□□□ -1.56
VPS50-204ENST00000438395 CRYGDP07320 174 aa5.29□□□□□ -1.56
VPS50-204ENST00000438395 IL15RAQ13261 267 aa5.29□□□□□ -1.56
VPS50-204ENST00000438395 RNF151Q2KHN1 245 aa5.29□□□□□ -1.56
VPS50-204ENST00000438395 OR10G4Q8NGN3 311 aa5.29□□□□□ -1.56
VPS50-204ENST00000438395 ZNF479Q96JC4 524 aa5.29□□□□□ -1.56
VPS50-204ENST00000438395 NDFIP1Q9BT67 221 aa5.29□□□□□ -1.56
VPS50-204ENST00000438395 OR5AC2Q9NZP5 309 aa5.29□□□□□ -1.56
VPS50-204ENST00000438395 A0A087WTM6 91 aa5.28□□□□□ -1.56
VPS50-204ENST00000438395 TRAV4A0A0B4J268 109 aa5.28□□□□□ -1.56
VPS50-204ENST00000438395 TRAV21A0A0B4J279 112 aa5.28□□□□□ -1.56
VPS50-204ENST00000438395 A0A1W2PPV4 95 aa5.28□□□□□ -1.56
VPS50-204ENST00000438395 DIRC3C9JPN6 131 aa5.28□□□□□ -1.56
VPS50-204ENST00000438395 M0R2P5 195 aa5.28□□□□□ -1.56
VPS50-204ENST00000438395 SLPIP03973 132 aa5.28□□□□□ -1.56
VPS50-204ENST00000438395 DNAH10OSP0CZ25 163 aa5.28□□□□□ -1.56
VPS50-204ENST00000438395 INAFM2P0DMQ5 153 aa5.28□□□□□ -1.56
VPS50-204ENST00000438395 Q6AWC8 147 aa5.28□□□□□ -1.56
VPS50-204ENST00000438395 Q6ZQT7 251 aa5.28□□□□□ -1.56
VPS50-204ENST00000438395 GOLT1AQ6ZVE7 132 aa5.28□□□□□ -1.56
VPS50-204ENST00000438395 WFDC10BQ8IUB3 73 aa5.28□□□□□ -1.56
VPS50-204ENST00000438395 IQCF2Q8IXL9 164 aa5.28□□□□□ -1.56
VPS50-204ENST00000438395 PPP1R1CQ8WVI7 109 aa5.28□□□□□ -1.56
VPS50-204ENST00000438395 TMED6Q8WW62 240 aa5.28□□□□□ -1.56
VPS50-204ENST00000438395 RASL10AQ92737 203 aa5.28□□□□□ -1.56
VPS50-204ENST00000438395 KCNS1Q96KK3 526 aa5.28□□□□□ -1.56
VPS50-204ENST00000438395 SDF2L1Q9HCN8 221 aa5.28□□□□□ -1.56
VPS50-204ENST00000438395 OTORQ9NRC9 128 aa5.28□□□□□ -1.56
VPS50-204ENST00000438395 MDFICQ9P1T7 246 aa5.28□□□□□ -1.56
VPS50-204ENST00000438395 APOBP04114 4563 aaKnown RBP5.28□□□□□ -1.56
VPS50-204ENST00000438395 TRAV8-6A0A0B4J262 113 aa5.27□□□□□ -1.57
VPS50-204ENST00000438395 FBLL1A6NHQ2 334 aaKnown RBP5.27□□□□□ -1.57
VPS50-204ENST00000438395 F6UZH7 168 aa5.27□□□□□ -1.57
VPS50-204ENST00000438395 INMT-MINDY4F8WBC2 141 aa5.27□□□□□ -1.57
VPS50-204ENST00000438395 K7EQM0 130 aa5.27□□□□□ -1.57
VPS50-204ENST00000438395 FUSP35637 526 aaKnown RBP eCLIP5.27□□□□□ -1.57
VPS50-204ENST00000438395 SUMO1P63165 101 aaKnown RBP5.27□□□□□ -1.57
VPS50-204ENST00000438395 ACOT6Q3I5F7 207 aaPredicted RBP5.27□□□□□ -1.57
VPS50-204ENST00000438395 PQLC2Q6ZP29 291 aa5.27□□□□□ -1.57
VPS50-204ENST00000438395 LINC00299Q6ZSB3 139 aa5.27□□□□□ -1.57
VPS50-204ENST00000438395 ASB13Q8WXK3 278 aa5.27□□□□□ -1.57
VPS50-204ENST00000438395 PRADC1Q9BSG0 188 aa5.27□□□□□ -1.57
VPS50-204ENST00000438395 SMIM3Q9BZL3 60 aa5.27□□□□□ -1.57
VPS50-204ENST00000438395 TREM1Q9NP99 234 aa5.27□□□□□ -1.57
VPS50-204ENST00000438395 MBD2Q9UBB5 411 aa5.27□□□□□ -1.57
VPS50-204ENST00000438395 HSPB11Q9Y547 144 aa5.27□□□□□ -1.57
VPS50-204ENST00000438395 TNFRSF18Q9Y5U5 241 aa5.27□□□□□ -1.57
VPS50-204ENST00000438395 IGLV5-52A0A0A0MRZ9 124 aa5.26□□□□□ -1.57
VPS50-204ENST00000438395 IGHV3-16A0A0C4DH30 117 aa5.26□□□□□ -1.57
VPS50-204ENST00000438395 IGHV3-38A0A0C4DH36 116 aa5.26□□□□□ -1.57
VPS50-204ENST00000438395 PGPA6NDG6 321 aa5.26□□□□□ -1.57
VPS50-204ENST00000438395 ZNF561-AS1K7EIQ3 104 aa5.26□□□□□ -1.57
VPS50-204ENST00000438395 UPK1BO75841 260 aa5.26□□□□□ -1.57
VPS50-204ENST00000438395 PFN1P07737 140 aaKnown RBP5.26□□□□□ -1.57
VPS50-204ENST00000438395 GCSHP23434 173 aa5.26□□□□□ -1.57
VPS50-204ENST00000438395 RPL12P30050 165 aaKnown RBP5.26□□□□□ -1.57
VPS50-204ENST00000438395 DEFA1P59665 94 aa5.26□□□□□ -1.57
VPS50-204ENST00000438395 DEFA3P59666 94 aa5.26□□□□□ -1.57
VPS50-204ENST00000438395 TDRG1Q3Y452 100 aa5.26□□□□□ -1.57
VPS50-204ENST00000438395 ZFP69Q49AA0 526 aa5.26□□□□□ -1.57
VPS50-204ENST00000438395 OR10J3Q5JRS4 329 aa5.26□□□□□ -1.57
VPS50-204ENST00000438395 Q5VSD8 79 aa5.26□□□□□ -1.57
VPS50-204ENST00000438395 SH3BGRL3Q9H299 93 aa5.26□□□□□ -1.57
VPS50-204ENST00000438395 Q9HAA7 133 aa5.26□□□□□ -1.57
VPS50-204ENST00000438395 HERC1Q15751 4861 aa5.25□□□□□ -1.57
VPS50-204ENST00000438395 SRRM2Q9UQ35 2752 aaKnown RBP5.25□□□□□ -1.57
VPS50-204ENST00000438395 SERTM2A0A1B0GWG4 89 aa5.25□□□□□ -1.57
VPS50-204ENST00000438395 H0YIZ8 118 aa5.25□□□□□ -1.57
VPS50-204ENST00000438395 MPC2O95563 127 aa5.25□□□□□ -1.57
VPS50-204ENST00000438395 H2BFSP57053 126 aa5.25□□□□□ -1.57
VPS50-204ENST00000438395 TIRAPP58753 221 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms