RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 PRADC1Q9BSG0 188 aa5.21□□□□□ -1.57
CSDE1-205ENST00000438362 CSPG4Q6UVK1 2322 aa5.21□□□□□ -1.58
CSDE1-205ENST00000438362 F8W1H4 67 aa5.21□□□□□ -1.58
CSDE1-205ENST00000438362 NDUFA4O00483 81 aa5.21□□□□□ -1.58
CSDE1-205ENST00000438362 BUB3O43684 328 aa5.21□□□□□ -1.58
CSDE1-205ENST00000438362 FOXE3Q13461 319 aa5.21□□□□□ -1.58
CSDE1-205ENST00000438362 MRPL53Q96EL3 112 aaKnown RBP5.21□□□□□ -1.58
CSDE1-205ENST00000438362 FANCD2OSQ96PS1 177 aa5.21□□□□□ -1.58
CSDE1-205ENST00000438362 C20orf78Q9BR46 151 aa5.21□□□□□ -1.58
CSDE1-205ENST00000438362 ITLN2Q8WWU7 325 aaPredicted RBP5.21□□□□□ -1.58
CSDE1-205ENST00000438362 LENEPQ9Y5L5 61 aa5.21□□□□□ -1.58
CSDE1-205ENST00000438362 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-205ENST00000438362 IGHV1-69DA0A0B4J2H0 117 aa5.2□□□□□ -1.58
CSDE1-205ENST00000438362 CRXO43186 299 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-205ENST00000438362 IGHV1-69P01742 117 aa5.2□□□□□ -1.58
CSDE1-205ENST00000438362 HOXB4P17483 251 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-205ENST00000438362 LOXL1Q08397 574 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-205ENST00000438362 DSCAMO60469 2012 aa5.2□□□□□ -1.58
CSDE1-205ENST00000438362 IGHV4-39P01824 125 aa5.2□□□□□ -1.58
CSDE1-205ENST00000438362 PMVKQ15126 192 aa5.2□□□□□ -1.58
CSDE1-205ENST00000438362 RRN3P1Q2M238 152 aa5.2□□□□□ -1.58
CSDE1-205ENST00000438362 C12orf74Q32Q52 190 aa5.2□□□□□ -1.58
CSDE1-205ENST00000438362 TP73-AS1Q9UF72 201 aa5.2□□□□□ -1.58
CSDE1-205ENST00000438362 MSRB2Q9Y3D2 182 aa5.2□□□□□ -1.58
CSDE1-205ENST00000438362 PRAC2D3DTV9 90 aa5.2□□□□□ -1.58
CSDE1-205ENST00000438362 H3BMG7 143 aa5.2□□□□□ -1.58
CSDE1-205ENST00000438362 Q8N9W7 124 aa5.2□□□□□ -1.58
CSDE1-205ENST00000438362 ZNF48Q96MX3 618 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-205ENST00000438362 TTTY13Q9BZ97 58 aa5.2□□□□□ -1.58
CSDE1-205ENST00000438362 C5orf42Q9H799 3197 aa5.19□□□□□ -1.58
CSDE1-205ENST00000438362 SDHAF1A6NFY7 115 aa5.19□□□□□ -1.58
CSDE1-205ENST00000438362 SAP30O75446 220 aa5.19□□□□□ -1.58
CSDE1-205ENST00000438362 CRYGBP07316 175 aa5.19□□□□□ -1.58
CSDE1-205ENST00000438362 AMTNQ6UX39 209 aa5.19□□□□□ -1.58
CSDE1-205ENST00000438362 TSSC4Q9Y5U2 329 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-205ENST00000438362 B4DSR2 109 aa5.19□□□□□ -1.58
CSDE1-205ENST00000438362 NEGR1Q7Z3B1 354 aa5.19□□□□□ -1.58
CSDE1-205ENST00000438362 Q8N976 141 aa5.19□□□□□ -1.58
CSDE1-205ENST00000438362 TMEM141Q96I45 108 aa5.19□□□□□ -1.58
CSDE1-205ENST00000438362 CENPVL3A0A0U1RRI6 287 aa5.19□□□□□ -1.58
CSDE1-205ENST00000438362 PRSS29PA6NIE9 313 aa5.19□□□□□ -1.58
CSDE1-205ENST00000438362 FXYD2P54710 66 aa5.19□□□□□ -1.58
CSDE1-205ENST00000438362 TEX29Q8N6K0 151 aa5.19□□□□□ -1.58
CSDE1-205ENST00000438362 YAE1D1Q9NRH1 226 aa5.19□□□□□ -1.58
CSDE1-205ENST00000438362 HIGD1BQ9P298 99 aa5.19□□□□□ -1.58
CSDE1-205ENST00000438362 PEMTQ9UBM1 199 aa5.19□□□□□ -1.58
CSDE1-205ENST00000438362 CACNA1AO00555 2505 aa5.19□□□□□ -1.58
CSDE1-205ENST00000438362 IGHV3-73A0A0B4J1V6 119 aa5.19□□□□□ -1.58
CSDE1-205ENST00000438362 IGKV3D-20A0A0C4DH25 116 aa5.19□□□□□ -1.58
CSDE1-205ENST00000438362 K7EMI3 77 aa5.19□□□□□ -1.58
CSDE1-205ENST00000438362 TNRC18O15417 2968 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-205ENST00000438362 IGKV3OR2-268A0A0C4DH90 116 aa5.18□□□□□ -1.58
CSDE1-205ENST00000438362 VWC2LB2RUY7 222 aa5.18□□□□□ -1.58
CSDE1-205ENST00000438362 ODF1Q14990 250 aa5.18□□□□□ -1.58
CSDE1-205ENST00000438362 TRPT1Q86TN4 253 aaKnown RBP5.18□□□□□ -1.58
CSDE1-205ENST00000438362 A0A0C4DFX4 3053 aa5.18□□□□□ -1.58
CSDE1-205ENST00000438362 COL4A2P08572 1712 aa5.18□□□□□ -1.58
CSDE1-205ENST00000438362 TRBV20-1A0A075B6N2 111 aa5.18□□□□□ -1.58
CSDE1-205ENST00000438362 SPRY2O43597 315 aa5.18□□□□□ -1.58
CSDE1-205ENST00000438362 GNLYP22749 145 aa5.18□□□□□ -1.58
CSDE1-205ENST00000438362 ZNF80P51504 273 aaPredicted RBP5.18□□□□□ -1.58
CSDE1-205ENST00000438362 Q8NA96 180 aa5.18□□□□□ -1.58
CSDE1-205ENST00000438362 F6UB75 175 aa5.18□□□□□ -1.58
CSDE1-205ENST00000438362 TMEM101Q96IK0 257 aa5.18□□□□□ -1.58
CSDE1-205ENST00000438362 CUL9Q8IWT3 2517 aa5.17□□□□□ -1.58
CSDE1-205ENST00000438362 TEX48A0A1B0GUV7 120 aa5.17□□□□□ -1.58
CSDE1-205ENST00000438362 M0R2P5 195 aa5.17□□□□□ -1.58
CSDE1-205ENST00000438362 GNRH2O43555 120 aa5.17□□□□□ -1.58
CSDE1-205ENST00000438362 DNAL4O96015 105 aa5.17□□□□□ -1.58
CSDE1-205ENST00000438362 IGLV2-11P01706 119 aa5.17□□□□□ -1.58
CSDE1-205ENST00000438362 CRIP1P50238 77 aa5.17□□□□□ -1.58
CSDE1-205ENST00000438362 CKS1BP61024 79 aa5.17□□□□□ -1.58
CSDE1-205ENST00000438362 IGHV7-4-1A0A0J9YVY3 117 aa5.17□□□□□ -1.58
CSDE1-205ENST00000438362 GAGE12HA6NDE8 117 aa5.17□□□□□ -1.58
CSDE1-205ENST00000438362 IGLL5B9A064 214 aa5.17□□□□□ -1.58
CSDE1-205ENST00000438362 SYNJ2BPP57105 145 aa5.17□□□□□ -1.58
CSDE1-205ENST00000438362 SPINK13Q1W4C9 94 aa5.17□□□□□ -1.58
CSDE1-205ENST00000438362 SPXQ9BT56 116 aa5.17□□□□□ -1.58
CSDE1-205ENST00000438362 TIMM21Q9BVV7 248 aa5.17□□□□□ -1.58
CSDE1-205ENST00000438362 C9JAW5 83 aa5.17□□□□□ -1.58
CSDE1-205ENST00000438362 MSMBP08118 114 aa5.17□□□□□ -1.58
CSDE1-205ENST00000438362 IGLC6P0CF74 106 aa5.17□□□□□ -1.58
CSDE1-205ENST00000438362 SRSF2Q01130 221 aaKnown RBP5.17□□□□□ -1.58
CSDE1-205ENST00000438362 Q5PR19 223 aa5.17□□□□□ -1.58
CSDE1-205ENST00000438362 LY6G5BQ8NDX9 201 aa5.17□□□□□ -1.58
CSDE1-205ENST00000438362 ANAPC13Q9BS18 74 aa5.17□□□□□ -1.58
CSDE1-205ENST00000438362 A0A0U1RRA0 63 aa5.16□□□□□ -1.58
CSDE1-205ENST00000438362 SPINK8P0C7L1 97 aa5.16□□□□□ -1.58
CSDE1-205ENST00000438362 DSCR9P59020 149 aa5.16□□□□□ -1.58
CSDE1-205ENST00000438362 ZNF415Q09FC8 603 aa5.16□□□□□ -1.58
CSDE1-205ENST00000438362 GAGE2BQ13066 116 aa5.16□□□□□ -1.58
CSDE1-205ENST00000438362 GAGE2EQ4V326 116 aa5.16□□□□□ -1.58
CSDE1-205ENST00000438362 C9orf47Q6ZRZ4 202 aa5.16□□□□□ -1.58
CSDE1-205ENST00000438362 RPL39LQ96EH5 51 aaKnown RBP5.16□□□□□ -1.58
CSDE1-205ENST00000438362 GAGE2DQ9UEU5 116 aa5.16□□□□□ -1.58
CSDE1-205ENST00000438362 IGHV1OR15-1A0A075B7D0 117 aa5.16□□□□□ -1.58
CSDE1-205ENST00000438362 TRAV8-4A0A0B4J246 113 aa5.16□□□□□ -1.58
CSDE1-205ENST00000438362 NBL1P41271 181 aa5.16□□□□□ -1.58
CSDE1-205ENST00000438362 ATXN8Q156A1 80 aa5.16□□□□□ -1.58
CSDE1-205ENST00000438362 FBXL19-AS1Q494R0 122 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms