RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 MT-ND6P03923 174 aa10.02□□□□□ -0.8
HLA-DPA1-243ENST00000437811 LYZL1Q6UWQ5 148 aa10.02□□□□□ -0.8
HLA-DPA1-243ENST00000437811 FRZBQ92765 325 aa10.02□□□□□ -0.8
HLA-DPA1-243ENST00000437811 NAGKQ9UJ70 344 aa10.02□□□□□ -0.8
HLA-DPA1-243ENST00000437811 HLA-DQA1P01909 254 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 ARMS2P0C7Q2 107 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 HBBP68871 147 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 FABP9Q0Z7S8 132 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 RIGQ13278 110 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 ANXA2RQ3ZCQ2 193 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 SHISA2Q6UWI4 295 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 C12orf54Q6X4T0 127 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 C3orf56Q8N813 242 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 WFDC9Q8NEX5 89 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 TMEM158Q8WZ71 300 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 BORCS7Q96B45 105 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 MCRIP2Q9BUT9 160 aaKnown RBP10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 TPPP3Q9BW30 176 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 MRPL18Q9H0U6 180 aaKnown RBP10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 TRAV12-2A0A075B6T6 113 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 TRAV12-3A0A0B4J271 114 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 A0A1B0GW15 77 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 ZNF324O75467 553 aaPredicted RBP10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 CD7P09564 240 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 TRGC1P0CF51 173 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 CAMPP49913 170 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 RAB4BP61018 213 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 MUC21Q5SSG8 566 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 TRPT1Q86TN4 253 aaKnown RBP10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 C19orf73Q9NVV2 129 aa10.01□□□□□ -0.81
HLA-DPA1-243ENST00000437811 HIST1H2BKO60814 126 aa10□□□□□ -0.81
HLA-DPA1-243ENST00000437811 S100A8P05109 93 aa10□□□□□ -0.81
HLA-DPA1-243ENST00000437811 HIST1H2BJP06899 126 aa10□□□□□ -0.81
HLA-DPA1-243ENST00000437811 HIST1H2BOP23527 126 aa10□□□□□ -0.81
HLA-DPA1-243ENST00000437811 HIST1H2BBP33778 126 aa10□□□□□ -0.81
HLA-DPA1-243ENST00000437811 FXYD7P58549 80 aa10□□□□□ -0.81
HLA-DPA1-243ENST00000437811 HIST1H2BDP58876 126 aa10□□□□□ -0.81
HLA-DPA1-243ENST00000437811 HIST1H2BCP62807 126 aa10□□□□□ -0.81
HLA-DPA1-243ENST00000437811 HIST2H2BEQ16778 126 aa10□□□□□ -0.81
HLA-DPA1-243ENST00000437811 HIST2H2BFQ5QNW6 126 aaPredicted RBP10□□□□□ -0.81
HLA-DPA1-243ENST00000437811 STHQ8IWL8 128 aa10□□□□□ -0.81
HLA-DPA1-243ENST00000437811 GATD1Q8NB37 220 aa10□□□□□ -0.81
HLA-DPA1-243ENST00000437811 HIST1H2BHQ93079 126 aa10□□□□□ -0.81
HLA-DPA1-243ENST00000437811 HIST1H2BNQ99877 126 aa10□□□□□ -0.81
HLA-DPA1-243ENST00000437811 HIST1H2BMQ99879 126 aa10□□□□□ -0.81
HLA-DPA1-243ENST00000437811 AGRNO00468 2067 aa9.99□□□□□ -0.81
HLA-DPA1-243ENST00000437811 JMJD1CQ15652 2540 aa9.99□□□□□ -0.81
HLA-DPA1-243ENST00000437811 F2Z2F3 143 aa9.99□□□□□ -0.81
HLA-DPA1-243ENST00000437811 CRXO43186 299 aaPredicted RBP9.99□□□□□ -0.81
HLA-DPA1-243ENST00000437811 SNAI2O43623 268 aa9.99□□□□□ -0.81
HLA-DPA1-243ENST00000437811 MED14OSP0DP75 135 aa9.99□□□□□ -0.81
HLA-DPA1-243ENST00000437811 ASIPP42127 132 aa9.99□□□□□ -0.81
HLA-DPA1-243ENST00000437811 DNLZQ5SXM8 178 aa9.99□□□□□ -0.81
HLA-DPA1-243ENST00000437811 FAM159AQ6UWV7 190 aa9.99□□□□□ -0.81
HLA-DPA1-243ENST00000437811 KCNS1Q96KK3 526 aa9.99□□□□□ -0.81
HLA-DPA1-243ENST00000437811 CNFNQ9BYD5 112 aa9.99□□□□□ -0.81
HLA-DPA1-243ENST00000437811 AMBPP02760 352 aa9.98□□□□□ -0.81
HLA-DPA1-243ENST00000437811 OR5AL1P0C617 328 aa9.98□□□□□ -0.81
HLA-DPA1-243ENST00000437811 TDRG1Q3Y452 100 aa9.98□□□□□ -0.81
HLA-DPA1-243ENST00000437811 SSBP4Q9BWG4 385 aaPredicted RBP9.98□□□□□ -0.81
HLA-DPA1-243ENST00000437811 IGHV1OR15-1A0A075B7D0 117 aa9.97□□□□□ -0.81
HLA-DPA1-243ENST00000437811 MUC21A0A0G2JKD1 596 aa9.97□□□□□ -0.81
HLA-DPA1-243ENST00000437811 MUC21A0A140T8X8 626 aa9.97□□□□□ -0.81
HLA-DPA1-243ENST00000437811 H3BVH4 76 aa9.97□□□□□ -0.81
HLA-DPA1-243ENST00000437811 WIPF1O43516 503 aa9.97□□□□□ -0.81
HLA-DPA1-243ENST00000437811 APCSP02743 223 aa9.97□□□□□ -0.81
HLA-DPA1-243ENST00000437811 RBMY1A1P0DJD3 496 aaKnown RBP9.97□□□□□ -0.81
HLA-DPA1-243ENST00000437811 RBMY1CP0DJD4 496 aa9.97□□□□□ -0.81
HLA-DPA1-243ENST00000437811 RBMY1FQ15415 496 aaKnown RBP9.97□□□□□ -0.81
HLA-DPA1-243ENST00000437811 WFDC10AQ9H1F0 79 aa9.97□□□□□ -0.81
HLA-DPA1-243ENST00000437811 TEP1Q99973 2627 aaKnown RBP9.97□□□□□ -0.81
HLA-DPA1-243ENST00000437811 GNRH2O43555 120 aa9.96□□□□□ -0.82
HLA-DPA1-243ENST00000437811 INSP01308 110 aa9.96□□□□□ -0.82
HLA-DPA1-243ENST00000437811 IGLL1P15814 213 aa9.96□□□□□ -0.82
HLA-DPA1-243ENST00000437811 CACNG7P62955 275 aa9.96□□□□□ -0.82
HLA-DPA1-243ENST00000437811 SLAQ13239 276 aa9.96□□□□□ -0.82
HLA-DPA1-243ENST00000437811 ZNF493Q6ZR52 646 aa9.96□□□□□ -0.82
HLA-DPA1-243ENST00000437811 C20orf144Q9BQM9 153 aa9.96□□□□□ -0.82
HLA-DPA1-243ENST00000437811 SORL1Q92673 2214 aa9.96□□□□□ -0.82
HLA-DPA1-243ENST00000437811 S100A6P06703 90 aa9.95□□□□□ -0.82
HLA-DPA1-243ENST00000437811 RNASE3P12724 160 aaKnown RBP9.95□□□□□ -0.82
HLA-DPA1-243ENST00000437811 S100A4P26447 101 aaKnown RBP9.95□□□□□ -0.82
HLA-DPA1-243ENST00000437811 GTSCR1Q86UQ5 136 aa9.95□□□□□ -0.82
HLA-DPA1-243ENST00000437811 OR10AG1Q8NH19 301 aa9.95□□□□□ -0.82
HLA-DPA1-243ENST00000437811 SCRT2Q9NQ03 307 aa9.95□□□□□ -0.82
HLA-DPA1-243ENST00000437811 IGHV4-4A0A075B6R2 117 aa9.94□□□□□ -0.82
HLA-DPA1-243ENST00000437811 NTF3P20783 257 aa9.94□□□□□ -0.82
HLA-DPA1-243ENST00000437811 NDUFA6P56556 154 aa9.94□□□□□ -0.82
HLA-DPA1-243ENST00000437811 NUTF2P61970 127 aaKnown RBP9.94□□□□□ -0.82
HLA-DPA1-243ENST00000437811 TWIST1Q15672 202 aa9.94□□□□□ -0.82
HLA-DPA1-243ENST00000437811 KIAA1644Q3SXP7 199 aa9.94□□□□□ -0.82
HLA-DPA1-243ENST00000437811 TRGV11A0A075B6L2 103 aa9.93□□□□□ -0.82
HLA-DPA1-243ENST00000437811 IGHV3-16A0A0C4DH30 117 aa9.93□□□□□ -0.82
HLA-DPA1-243ENST00000437811 LOC105371267A0A1B0GV96 52 aa9.93□□□□□ -0.82
HLA-DPA1-243ENST00000437811 SSTP61278 116 aa9.93□□□□□ -0.82
HLA-DPA1-243ENST00000437811 PRR31Q5SQ13 230 aa9.93□□□□□ -0.82
HLA-DPA1-243ENST00000437811 LINC00528Q8N1L1 170 aa9.93□□□□□ -0.82
HLA-DPA1-243ENST00000437811 DEFB125Q8N687 156 aa9.93□□□□□ -0.82
HLA-DPA1-243ENST00000437811 LINC00467Q9BRT7 94 aa9.93□□□□□ -0.82
HLA-DPA1-243ENST00000437811 MSRB1Q9NZV6 116 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms