RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 FLI1Q01543 452 aaPredicted RBP12.66□□□□□ -0.38
HMGN1-207ENST00000436324 TDRG1Q3Y452 100 aa12.66□□□□□ -0.38
HMGN1-207ENST00000436324 ZNF479Q96JC4 524 aa12.66□□□□□ -0.38
HMGN1-207ENST00000436324 SDF2L1Q9HCN8 221 aa12.66□□□□□ -0.38
HMGN1-207ENST00000436324 HHLA3Q9XRX5 114 aa12.66□□□□□ -0.38
HMGN1-207ENST00000436324 DNAH2Q9P225 4427 aa12.65□□□□□ -0.38
HMGN1-207ENST00000436324 TRAV34A0A0B4J273 112 aa12.65□□□□□ -0.38
HMGN1-207ENST00000436324 A0A1W2PRE2 83 aa12.65□□□□□ -0.38
HMGN1-207ENST00000436324 IFNA7P01567 189 aa12.65□□□□□ -0.38
HMGN1-207ENST00000436324 IGLV2-11P01706 119 aa12.65□□□□□ -0.38
HMGN1-207ENST00000436324 CYB561D1Q8N8Q1 229 aa12.65□□□□□ -0.38
HMGN1-207ENST00000436324 LINC00479Q96M42 142 aa12.65□□□□□ -0.38
HMGN1-207ENST00000436324 PRO0255Q9UI72 69 aa12.65□□□□□ -0.38
HMGN1-207ENST00000436324 MRPS16Q9Y3D3 137 aaKnown RBP12.65□□□□□ -0.38
HMGN1-207ENST00000436324 ICOSQ9Y6W8 199 aa12.65□□□□□ -0.38
HMGN1-207ENST00000436324 DNAH17Q9UFH2 4485 aa12.65□□□□□ -0.38
HMGN1-207ENST00000436324 GCGP01275 180 aa12.64□□□□□ -0.39
HMGN1-207ENST00000436324 CRYBA4P53673 196 aa12.64□□□□□ -0.39
HMGN1-207ENST00000436324 C6orf223Q8N319 242 aa12.64□□□□□ -0.39
HMGN1-207ENST00000436324 RASL10AQ92737 203 aa12.64□□□□□ -0.39
HMGN1-207ENST00000436324 C11orf21Q9P2W6 132 aa12.64□□□□□ -0.39
HMGN1-207ENST00000436324 MUC4Q99102 2169 aa12.63□□□□□ -0.39
HMGN1-207ENST00000436324 M0R2P5 195 aa12.63□□□□□ -0.39
HMGN1-207ENST00000436324 SLAQ13239 276 aa12.63□□□□□ -0.39
HMGN1-207ENST00000436324 SMUG1Q53HV7 270 aa12.63□□□□□ -0.39
HMGN1-207ENST00000436324 TMEM75Q8N9X5 138 aa12.63□□□□□ -0.39
HMGN1-207ENST00000436324 OR11H4Q8NGC9 324 aa12.63□□□□□ -0.39
HMGN1-207ENST00000436324 KCNS1Q96KK3 526 aa12.63□□□□□ -0.39
HMGN1-207ENST00000436324 MAP1LC3B2A6NCE7 125 aa12.62□□□□□ -0.39
HMGN1-207ENST00000436324 ZFP69Q49AA0 526 aa12.62□□□□□ -0.39
HMGN1-207ENST00000436324 KCNRGQ8N5I3 272 aa12.62□□□□□ -0.39
HMGN1-207ENST00000436324 OR4C5Q8NGB2 326 aa12.62□□□□□ -0.39
HMGN1-207ENST00000436324 UPK3BQ9BT76 320 aa12.62□□□□□ -0.39
HMGN1-207ENST00000436324 MAP1LC3BQ9GZQ8 125 aa12.62□□□□□ -0.39
HMGN1-207ENST00000436324 FAT2Q9NYQ8 4349 aa12.62□□□□□ -0.39
HMGN1-207ENST00000436324 HECTD4Q9Y4D8 3996 aa12.62□□□□□ -0.39
HMGN1-207ENST00000436324 FAM74A7A6NL05 159 aa12.61□□□□□ -0.39
HMGN1-207ENST00000436324 C9JCJ5 164 aa12.61□□□□□ -0.39
HMGN1-207ENST00000436324 FHITP49789 147 aa12.61□□□□□ -0.39
HMGN1-207ENST00000436324 TNP2Q05952 138 aa12.61□□□□□ -0.39
HMGN1-207ENST00000436324 KRTAP1-5Q9BYS1 174 aa12.61□□□□□ -0.39
HMGN1-207ENST00000436324 TRAV4A0A0B4J268 109 aa12.6□□□□□ -0.39
HMGN1-207ENST00000436324 PEX7O00628 323 aa12.6□□□□□ -0.39
HMGN1-207ENST00000436324 PFN1P07737 140 aaKnown RBP12.6□□□□□ -0.39
HMGN1-207ENST00000436324 MRPL23Q16540 153 aaKnown RBP12.6□□□□□ -0.39
HMGN1-207ENST00000436324 SAPCD1Q5SSQ6 148 aa12.6□□□□□ -0.39
HMGN1-207ENST00000436324 ARL2-SNX15V9GYD0 113 aa12.6□□□□□ -0.39
HMGN1-207ENST00000436324 FBLL1A6NHQ2 334 aaKnown RBP12.59□□□□□ -0.39
HMGN1-207ENST00000436324 GYPEP15421 78 aa12.59□□□□□ -0.39
HMGN1-207ENST00000436324 PPT1P50897 306 aa12.59□□□□□ -0.39
HMGN1-207ENST00000436324 ZNF345Q14585 488 aa12.59□□□□□ -0.39
HMGN1-207ENST00000436324 TTC32Q5I0X7 151 aa12.59□□□□□ -0.39
HMGN1-207ENST00000436324 PCNPQ8WW12 178 aaKnown RBP12.59□□□□□ -0.39
HMGN1-207ENST00000436324 ZNF471Q9BX82 626 aaPredicted RBP12.59□□□□□ -0.39
HMGN1-207ENST00000436324 HMSDA8MTL9 139 aa12.58□□□□□ -0.4
HMGN1-207ENST00000436324 NXPH4O95158 308 aa12.58□□□□□ -0.4
HMGN1-207ENST00000436324 CST9LP1Q5W188 147 aa12.58□□□□□ -0.4
HMGN1-207ENST00000436324 NEGR1Q7Z3B1 354 aa12.58□□□□□ -0.4
HMGN1-207ENST00000436324 STOML3Q8TAV4 291 aa12.58□□□□□ -0.4
HMGN1-207ENST00000436324 A0A0D9SG52 128 aa12.57□□□□□ -0.4
HMGN1-207ENST00000436324 A0A1B0GV50 99 aa12.57□□□□□ -0.4
HMGN1-207ENST00000436324 KANTRA0A1W2PQU2 76 aa12.57□□□□□ -0.4
HMGN1-207ENST00000436324 K7EQD1 137 aa12.57□□□□□ -0.4
HMGN1-207ENST00000436324 SRIP30626 198 aa12.57□□□□□ -0.4
HMGN1-207ENST00000436324 ZNF876PQ49A33 203 aa12.57□□□□□ -0.4
HMGN1-207ENST00000436324 LYPD5Q6UWN5 251 aa12.57□□□□□ -0.4
HMGN1-207ENST00000436324 FAM213BQ8TBF2 198 aa12.57□□□□□ -0.4
HMGN1-207ENST00000436324 NKX6-2Q9C056 277 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-207ENST00000436324 LOC100131303A0A0U1RQF7 123 aa12.56□□□□□ -0.4
HMGN1-207ENST00000436324 SIVA1O15304 175 aa12.56□□□□□ -0.4
HMGN1-207ENST00000436324 BCL2L11O43521 198 aa12.56□□□□□ -0.4
HMGN1-207ENST00000436324 Q86TA4 180 aa12.56□□□□□ -0.4
HMGN1-207ENST00000436324 HIST1H2BAQ96A08 127 aa12.56□□□□□ -0.4
HMGN1-207ENST00000436324 IGHV3-73A0A0B4J1V6 119 aa12.55□□□□□ -0.4
HMGN1-207ENST00000436324 ORM1P02763 201 aa12.55□□□□□ -0.4
HMGN1-207ENST00000436324 SEC11BP0C7V7 166 aa12.55□□□□□ -0.4
HMGN1-207ENST00000436324 DPPA3Q6W0C5 159 aa12.55□□□□□ -0.4
HMGN1-207ENST00000436324 ZNF575Q86XF7 245 aa12.55□□□□□ -0.4
HMGN1-207ENST00000436324 SFT2D1Q8WV19 159 aa12.55□□□□□ -0.4
HMGN1-207ENST00000436324 C9orf85Q96MD7 179 aa12.55□□□□□ -0.4
HMGN1-207ENST00000436324 IGKV3D-20A0A0C4DH25 116 aa12.54□□□□□ -0.4
HMGN1-207ENST00000436324 A0A1W2PPQ1 181 aa12.54□□□□□ -0.4
HMGN1-207ENST00000436324 PGPEP1LA6NFU8 196 aa12.54□□□□□ -0.4
HMGN1-207ENST00000436324 FABP5P3A8MUU1 101 aa12.54□□□□□ -0.4
HMGN1-207ENST00000436324 PAGE4O60829 102 aa12.54□□□□□ -0.4
HMGN1-207ENST00000436324 RNASE3P12724 160 aaKnown RBP12.54□□□□□ -0.4
HMGN1-207ENST00000436324 TMUB2Q71RG4 321 aa12.54□□□□□ -0.4
HMGN1-207ENST00000436324 RS1O15537 224 aa12.53□□□□□ -0.4
HMGN1-207ENST00000436324 PFDN1O60925 122 aa12.53□□□□□ -0.4
HMGN1-207ENST00000436324 GATA1P15976 413 aaPredicted RBP12.53□□□□□ -0.4
HMGN1-207ENST00000436324 S100A4P26447 101 aaKnown RBP12.53□□□□□ -0.4
HMGN1-207ENST00000436324 UBE2G1P62253 170 aa12.53□□□□□ -0.4
HMGN1-207ENST00000436324 ZNF506Q5JVG8 444 aa12.53□□□□□ -0.4
HMGN1-207ENST00000436324 CFAP126Q5VTH2 177 aa12.53□□□□□ -0.4
HMGN1-207ENST00000436324 ZC2HC1AQ96GY0 325 aa12.53□□□□□ -0.4
HMGN1-207ENST00000436324 UMAD1C9J7I0 102 aa12.52□□□□□ -0.41
HMGN1-207ENST00000436324 CRIP1P50238 77 aa12.52□□□□□ -0.41
HMGN1-207ENST00000436324 NHLRC2Q8NBF2 726 aa12.52□□□□□ -0.41
HMGN1-207ENST00000436324 MBD3L1Q8WWY6 194 aa12.52□□□□□ -0.41
HMGN1-207ENST00000436324 TXNDC17Q9BRA2 123 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms