RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 FRZBQ92765 325 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 FAM167A-AS1Q96KT0 104 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 HYLS1Q96M11 299 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 ATP5SQ99766 215 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 MSRB1Q9NZV6 116 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 RPH3ALQ9UNE2 315 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 DNAH5Q8TE73 4624 aa5.31□□□□□ -1.56
VPS50-203ENST00000436177 SFTA3P0C7M3 94 aa5.3□□□□□ -1.56
VPS50-203ENST00000436177 ASAH1Q13510 395 aa5.3□□□□□ -1.56
VPS50-203ENST00000436177 FHL2Q14192 279 aa5.3□□□□□ -1.56
VPS50-203ENST00000436177 FFAR4Q5NUL3 377 aa5.3□□□□□ -1.56
VPS50-203ENST00000436177 LYPD5Q6UWN5 251 aa5.3□□□□□ -1.56
VPS50-203ENST00000436177 Q6ZRN7 208 aaPredicted RBP5.3□□□□□ -1.56
VPS50-203ENST00000436177 OR4C5Q8NGB2 326 aa5.3□□□□□ -1.56
VPS50-203ENST00000436177 FXYD5Q96DB9 178 aa5.3□□□□□ -1.56
VPS50-203ENST00000436177 NMES1Q9C002 83 aa5.3□□□□□ -1.56
VPS50-203ENST00000436177 WDR61Q9GZS3 305 aaKnown RBP5.3□□□□□ -1.56
VPS50-203ENST00000436177 LENEPQ9Y5L5 61 aa5.3□□□□□ -1.56
VPS50-203ENST00000436177 K7EQD1 137 aa5.29□□□□□ -1.56
VPS50-203ENST00000436177 SSNA1O43805 119 aa5.29□□□□□ -1.56
VPS50-203ENST00000436177 SIX6O95475 246 aa5.29□□□□□ -1.56
VPS50-203ENST00000436177 CRYGDP07320 174 aa5.29□□□□□ -1.56
VPS50-203ENST00000436177 IL15RAQ13261 267 aa5.29□□□□□ -1.56
VPS50-203ENST00000436177 OR10G4Q8NGN3 311 aa5.29□□□□□ -1.56
VPS50-203ENST00000436177 ZNF479Q96JC4 524 aa5.29□□□□□ -1.56
VPS50-203ENST00000436177 NDFIP1Q9BT67 221 aa5.29□□□□□ -1.56
VPS50-203ENST00000436177 OR5AC2Q9NZP5 309 aa5.29□□□□□ -1.56
VPS50-203ENST00000436177 A0A087WTM6 91 aa5.28□□□□□ -1.56
VPS50-203ENST00000436177 TRAV4A0A0B4J268 109 aa5.28□□□□□ -1.56
VPS50-203ENST00000436177 TRAV21A0A0B4J279 112 aa5.28□□□□□ -1.56
VPS50-203ENST00000436177 A0A1W2PPV4 95 aa5.28□□□□□ -1.56
VPS50-203ENST00000436177 DIRC3C9JPN6 131 aa5.28□□□□□ -1.56
VPS50-203ENST00000436177 M0R2P5 195 aa5.28□□□□□ -1.56
VPS50-203ENST00000436177 DNAH10OSP0CZ25 163 aa5.28□□□□□ -1.56
VPS50-203ENST00000436177 INAFM2P0DMQ5 153 aa5.28□□□□□ -1.56
VPS50-203ENST00000436177 Q6AWC8 147 aa5.28□□□□□ -1.56
VPS50-203ENST00000436177 Q6ZQT7 251 aa5.28□□□□□ -1.56
VPS50-203ENST00000436177 GOLT1AQ6ZVE7 132 aa5.28□□□□□ -1.56
VPS50-203ENST00000436177 WFDC10BQ8IUB3 73 aa5.28□□□□□ -1.56
VPS50-203ENST00000436177 IQCF2Q8IXL9 164 aa5.28□□□□□ -1.56
VPS50-203ENST00000436177 PPP1R1CQ8WVI7 109 aa5.28□□□□□ -1.56
VPS50-203ENST00000436177 TMED6Q8WW62 240 aa5.28□□□□□ -1.56
VPS50-203ENST00000436177 RASL10AQ92737 203 aa5.28□□□□□ -1.56
VPS50-203ENST00000436177 KCNS1Q96KK3 526 aa5.28□□□□□ -1.56
VPS50-203ENST00000436177 SDF2L1Q9HCN8 221 aa5.28□□□□□ -1.56
VPS50-203ENST00000436177 OTORQ9NRC9 128 aa5.28□□□□□ -1.56
VPS50-203ENST00000436177 MDFICQ9P1T7 246 aa5.28□□□□□ -1.56
VPS50-203ENST00000436177 APOBP04114 4563 aaKnown RBP5.28□□□□□ -1.56
VPS50-203ENST00000436177 TRAV8-6A0A0B4J262 113 aa5.27□□□□□ -1.57
VPS50-203ENST00000436177 FBLL1A6NHQ2 334 aaKnown RBP5.27□□□□□ -1.57
VPS50-203ENST00000436177 F6UZH7 168 aa5.27□□□□□ -1.57
VPS50-203ENST00000436177 INMT-MINDY4F8WBC2 141 aa5.27□□□□□ -1.57
VPS50-203ENST00000436177 K7EQM0 130 aa5.27□□□□□ -1.57
VPS50-203ENST00000436177 FUSP35637 526 aaKnown RBP eCLIP5.27□□□□□ -1.57
VPS50-203ENST00000436177 ACOT6Q3I5F7 207 aaPredicted RBP5.27□□□□□ -1.57
VPS50-203ENST00000436177 PQLC2Q6ZP29 291 aa5.27□□□□□ -1.57
VPS50-203ENST00000436177 LINC00299Q6ZSB3 139 aa5.27□□□□□ -1.57
VPS50-203ENST00000436177 ASB13Q8WXK3 278 aa5.27□□□□□ -1.57
VPS50-203ENST00000436177 PRADC1Q9BSG0 188 aa5.27□□□□□ -1.57
VPS50-203ENST00000436177 SMIM3Q9BZL3 60 aa5.27□□□□□ -1.57
VPS50-203ENST00000436177 TREM1Q9NP99 234 aa5.27□□□□□ -1.57
VPS50-203ENST00000436177 MBD2Q9UBB5 411 aa5.27□□□□□ -1.57
VPS50-203ENST00000436177 HSPB11Q9Y547 144 aa5.27□□□□□ -1.57
VPS50-203ENST00000436177 TNFRSF18Q9Y5U5 241 aa5.27□□□□□ -1.57
VPS50-203ENST00000436177 IGLV5-52A0A0A0MRZ9 124 aa5.26□□□□□ -1.57
VPS50-203ENST00000436177 IGHV3-16A0A0C4DH30 117 aa5.26□□□□□ -1.57
VPS50-203ENST00000436177 IGHV3-38A0A0C4DH36 116 aa5.26□□□□□ -1.57
VPS50-203ENST00000436177 PGPA6NDG6 321 aa5.26□□□□□ -1.57
VPS50-203ENST00000436177 UPK1BO75841 260 aa5.26□□□□□ -1.57
VPS50-203ENST00000436177 PFN1P07737 140 aaKnown RBP5.26□□□□□ -1.57
VPS50-203ENST00000436177 GCSHP23434 173 aa5.26□□□□□ -1.57
VPS50-203ENST00000436177 RPL12P30050 165 aaKnown RBP5.26□□□□□ -1.57
VPS50-203ENST00000436177 DEFA1P59665 94 aa5.26□□□□□ -1.57
VPS50-203ENST00000436177 DEFA3P59666 94 aa5.26□□□□□ -1.57
VPS50-203ENST00000436177 TDRG1Q3Y452 100 aa5.26□□□□□ -1.57
VPS50-203ENST00000436177 ZFP69Q49AA0 526 aa5.26□□□□□ -1.57
VPS50-203ENST00000436177 OR10J3Q5JRS4 329 aa5.26□□□□□ -1.57
VPS50-203ENST00000436177 Q5VSD8 79 aa5.26□□□□□ -1.57
VPS50-203ENST00000436177 SH3BGRL3Q9H299 93 aa5.26□□□□□ -1.57
VPS50-203ENST00000436177 Q9HAA7 133 aa5.26□□□□□ -1.57
VPS50-203ENST00000436177 HERC1Q15751 4861 aa5.25□□□□□ -1.57
VPS50-203ENST00000436177 SRRM2Q9UQ35 2752 aaKnown RBP5.25□□□□□ -1.57
VPS50-203ENST00000436177 SERTM2A0A1B0GWG4 89 aa5.25□□□□□ -1.57
VPS50-203ENST00000436177 H0YIZ8 118 aa5.25□□□□□ -1.57
VPS50-203ENST00000436177 MPC2O95563 127 aa5.25□□□□□ -1.57
VPS50-203ENST00000436177 H2BFSP57053 126 aa5.25□□□□□ -1.57
VPS50-203ENST00000436177 TIRAPP58753 221 aa5.25□□□□□ -1.57
VPS50-203ENST00000436177 RHOHQ15669 191 aa5.25□□□□□ -1.57
VPS50-203ENST00000436177 ZNF876PQ49A33 203 aa5.25□□□□□ -1.57
VPS50-203ENST00000436177 ARL6IP6Q8N6S5 226 aa5.25□□□□□ -1.57
VPS50-203ENST00000436177 NTN5Q8WTR8 489 aaPredicted RBP5.25□□□□□ -1.57
VPS50-203ENST00000436177 TRAV8-1A0A0A6YYK1 113 aa5.24□□□□□ -1.57
VPS50-203ENST00000436177 LOC100131303A0A0U1RQF7 123 aa5.24□□□□□ -1.57
VPS50-203ENST00000436177 TAAR5O14804 337 aa5.24□□□□□ -1.57
VPS50-203ENST00000436177 GNRH2O43555 120 aa5.24□□□□□ -1.57
VPS50-203ENST00000436177 CIDEAO60543 219 aa5.24□□□□□ -1.57
VPS50-203ENST00000436177 TYMSP04818 313 aa5.24□□□□□ -1.57
VPS50-203ENST00000436177 GATA1P15976 413 aaPredicted RBP5.24□□□□□ -1.57
VPS50-203ENST00000436177 CDC34P49427 236 aaPredicted RBP5.24□□□□□ -1.57
VPS50-203ENST00000436177 KRTAP10-1P60331 282 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms