RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ODF1Q14990 250 aa7.9□□□□□ -1.14
CD44-210ENST00000434472 C18orf15Q96N68 181 aa7.9□□□□□ -1.14
CD44-210ENST00000434472 C20orf78Q9BR46 151 aa7.9□□□□□ -1.14
CD44-210ENST00000434472 KLK15Q9H2R5 256 aa7.9□□□□□ -1.14
CD44-210ENST00000434472 TP73-AS1Q9UF72 201 aa7.9□□□□□ -1.14
CD44-210ENST00000434472 CCL25O15444 150 aa7.89□□□□□ -1.15
CD44-210ENST00000434472 DPM2O94777 84 aa7.89□□□□□ -1.15
CD44-210ENST00000434472 SMIM17P0DL12 118 aa7.89□□□□□ -1.15
CD44-210ENST00000434472 HLA-DRB4P13762 266 aa7.89□□□□□ -1.15
CD44-210ENST00000434472 ORMDL2Q53FV1 153 aa7.89□□□□□ -1.15
CD44-210ENST00000434472 LINC01356Q8N9X3 169 aa7.89□□□□□ -1.15
CD44-210ENST00000434472 DKK2Q9UBU2 259 aa7.89□□□□□ -1.15
CD44-210ENST00000434472 PHLDA3Q9Y5J5 127 aa7.89□□□□□ -1.15
CD44-210ENST00000434472 HLA-DRB4X5D2U9 266 aa7.89□□□□□ -1.15
CD44-210ENST00000434472 DCHS2Q6V1P9 2916 aa7.89□□□□□ -1.15
CD44-210ENST00000434472 RNASE4P34096 147 aaKnown RBP7.89□□□□□ -1.15
CD44-210ENST00000434472 ANXA2RQ3ZCQ2 193 aa7.89□□□□□ -1.15
CD44-210ENST00000434472 TM4SF20Q53R12 229 aa7.89□□□□□ -1.15
CD44-210ENST00000434472 WFDC3Q8IUB2 231 aa7.89□□□□□ -1.15
CD44-210ENST00000434472 FOXC2Q99958 501 aa7.89□□□□□ -1.15
CD44-210ENST00000434472 SMIM2Q9BVW6 85 aa7.89□□□□□ -1.15
CD44-210ENST00000434472 CBY3A6NI87 242 aa7.88□□□□□ -1.15
CD44-210ENST00000434472 NMUP48645 174 aa7.88□□□□□ -1.15
CD44-210ENST00000434472 Q6ZVH6 145 aa7.88□□□□□ -1.15
CD44-210ENST00000434472 OR4C5Q8NGB2 326 aa7.88□□□□□ -1.15
CD44-210ENST00000434472 AP1S3Q96PC3 154 aa7.88□□□□□ -1.15
CD44-210ENST00000434472 HIGD1BQ9P298 99 aa7.88□□□□□ -1.15
CD44-210ENST00000434472 TRAV26-2A0A0B4J265 109 aa7.87□□□□□ -1.15
CD44-210ENST00000434472 H3BRM9 83 aa7.87□□□□□ -1.15
CD44-210ENST00000434472 J3KRW8 73 aa7.87□□□□□ -1.15
CD44-210ENST00000434472 ODF3Q96PU9 254 aa7.87□□□□□ -1.15
CD44-210ENST00000434472 DCHS1Q96JQ0 3298 aa7.86□□□□□ -1.15
CD44-210ENST00000434472 A0A087WX48 190 aa7.86□□□□□ -1.15
CD44-210ENST00000434472 TRAV12-1A0A0B4J245 112 aa7.86□□□□□ -1.15
CD44-210ENST00000434472 LINC01549A6NIU2 74 aa7.86□□□□□ -1.15
CD44-210ENST00000434472 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.86□□□□□ -1.15
CD44-210ENST00000434472 K7EP13 123 aa7.86□□□□□ -1.15
CD44-210ENST00000434472 NXPH4O95158 308 aa7.86□□□□□ -1.15
CD44-210ENST00000434472 AVPP01185 164 aa7.86□□□□□ -1.15
CD44-210ENST00000434472 PSMB8P28062 276 aa7.86□□□□□ -1.15
CD44-210ENST00000434472 SUMO2P61956 95 aaKnown RBP7.86□□□□□ -1.15
CD44-210ENST00000434472 DEFB112Q30KQ8 113 aa7.86□□□□□ -1.15
CD44-210ENST00000434472 Q6ZQT7 251 aa7.86□□□□□ -1.15
CD44-210ENST00000434472 Q6ZS46 218 aa7.86□□□□□ -1.15
CD44-210ENST00000434472 MED13LQ71F56 2210 aa7.86□□□□□ -1.15
CD44-210ENST00000434472 ABCA2Q9BZC7 2435 aa7.86□□□□□ -1.15
CD44-210ENST00000434472 C7orf71A4D174 169 aa7.85□□□□□ -1.15
CD44-210ENST00000434472 KLLNB2CW77 178 aa7.85□□□□□ -1.15
CD44-210ENST00000434472 PLNP26678 52 aa7.85□□□□□ -1.15
CD44-210ENST00000434472 FAM159AQ6UWV7 190 aa7.85□□□□□ -1.15
CD44-210ENST00000434472 ADAMTSL5Q6ZMM2 481 aa7.85□□□□□ -1.15
CD44-210ENST00000434472 POM121L12Q8N7R1 296 aa7.85□□□□□ -1.15
CD44-210ENST00000434472 HHLA3Q9XRX5 114 aa7.85□□□□□ -1.15
CD44-210ENST00000434472 CBY1Q9Y3M2 126 aa7.85□□□□□ -1.15
CD44-210ENST00000434472 TACC2O95359 2948 aa7.85□□□□□ -1.15
CD44-210ENST00000434472 F6UB75 175 aa7.85□□□□□ -1.15
CD44-210ENST00000434472 H7C1H1 209 aa7.85□□□□□ -1.15
CD44-210ENST00000434472 RPL32P62910 135 aaKnown RBP7.85□□□□□ -1.15
CD44-210ENST00000434472 LCNL1Q6ZST4 164 aa7.85□□□□□ -1.15
CD44-210ENST00000434472 PCP2Q8IVA1 136 aa7.85□□□□□ -1.15
CD44-210ENST00000434472 DCANP1Q8TF63 244 aa7.85□□□□□ -1.15
CD44-210ENST00000434472 RASL10AQ92737 203 aa7.85□□□□□ -1.15
CD44-210ENST00000434472 TOMM6Q96B49 74 aa7.85□□□□□ -1.15
CD44-210ENST00000434472 IGKV3-7A0A075B6H7 116 aa7.84□□□□□ -1.15
CD44-210ENST00000434472 C9orf118A6NHY6 69 aa7.84□□□□□ -1.15
CD44-210ENST00000434472 GNRH2O43555 120 aa7.84□□□□□ -1.15
CD44-210ENST00000434472 IGHV4-59P01825 116 aa7.84□□□□□ -1.15
CD44-210ENST00000434472 MGPP08493 103 aa7.84□□□□□ -1.15
CD44-210ENST00000434472 RNASE3P12724 160 aaKnown RBP7.84□□□□□ -1.15
CD44-210ENST00000434472 COX6B1P14854 86 aa7.84□□□□□ -1.15
CD44-210ENST00000434472 ZC2HC1BQ5TFG8 222 aa7.84□□□□□ -1.15
CD44-210ENST00000434472 AMMECR1LQ6DCA0 310 aa7.84□□□□□ -1.15
CD44-210ENST00000434472 C14orf178Q8N769 122 aaPredicted RBP7.84□□□□□ -1.15
CD44-210ENST00000434472 SCGB3A1Q96QR1 104 aa7.84□□□□□ -1.15
CD44-210ENST00000434472 MRPL35Q9NZE8 188 aaKnown RBP7.84□□□□□ -1.15
CD44-210ENST00000434472 SPTBN4Q9H254 2564 aa7.84□□□□□ -1.16
CD44-210ENST00000434472 LGALS9O00182 355 aa7.83□□□□□ -1.16
CD44-210ENST00000434472 ELANEP08246 267 aa7.83□□□□□ -1.16
CD44-210ENST00000434472 DEFB1P60022 68 aa7.83□□□□□ -1.16
CD44-210ENST00000434472 SNRPD3P62318 126 aaKnown RBP7.83□□□□□ -1.16
CD44-210ENST00000434472 GTSCR1Q86UQ5 136 aa7.83□□□□□ -1.16
CD44-210ENST00000434472 TMEM160Q9NX00 188 aa7.83□□□□□ -1.16
CD44-210ENST00000434472 F8VRH5 84 aa7.82□□□□□ -1.16
CD44-210ENST00000434472 DUSP14O95147 198 aaKnown RBP7.82□□□□□ -1.16
CD44-210ENST00000434472 LGALS1P09382 135 aaKnown RBP7.82□□□□□ -1.16
CD44-210ENST00000434472 TCTAP57738 103 aa7.82□□□□□ -1.16
CD44-210ENST00000434472 TAL2Q16559 108 aa7.82□□□□□ -1.16
CD44-210ENST00000434472 GTF2H5Q6ZYL4 71 aa7.82□□□□□ -1.16
CD44-210ENST00000434472 IGHV4OR15-8A0A075B7B6 117 aa7.81□□□□□ -1.16
CD44-210ENST00000434472 A0A087WW49 117 aa7.81□□□□□ -1.16
CD44-210ENST00000434472 A0A096LNT2 108 aa7.81□□□□□ -1.16
CD44-210ENST00000434472 TGFAP01135 160 aa7.81□□□□□ -1.16
CD44-210ENST00000434472 SRD5A1P18405 259 aa7.81□□□□□ -1.16
CD44-210ENST00000434472 TMEM95Q3KNT9 176 aa7.81□□□□□ -1.16
CD44-210ENST00000434472 SYT8Q8NBV8 401 aa7.81□□□□□ -1.16
CD44-210ENST00000434472 CHAC1Q9BUX1 264 aa7.81□□□□□ -1.16
CD44-210ENST00000434472 VPREB3Q9UKI3 123 aa7.81□□□□□ -1.16
CD44-210ENST00000434472 CHTOPQ9Y3Y2 248 aaKnown RBP7.81□□□□□ -1.16
CD44-210ENST00000434472 KIF25-AS1Q9Y6Z4 181 aa7.81□□□□□ -1.16
CD44-210ENST00000434472 IGKV2D-26A0A0A0MRZ7 120 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms