RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 SIVA1O15304 175 aa18.85■□□□□ 0.61
LMBR1-209ENST00000434453 LINC00477Q96M19 166 aa18.85■□□□□ 0.61
LMBR1-209ENST00000434453 IGHV4-30-2A0A087WSY4 118 aa18.85■□□□□ 0.61
LMBR1-209ENST00000434453 SPRY2O43597 315 aa18.85■□□□□ 0.61
LMBR1-209ENST00000434453 PRSS1P07477 247 aa18.85■□□□□ 0.61
LMBR1-209ENST00000434453 SMIM17P0DL12 118 aa18.85■□□□□ 0.61
LMBR1-209ENST00000434453 USMG5Q96IX5 58 aa18.84■□□□□ 0.61
LMBR1-209ENST00000434453 FOXC2Q99958 501 aa18.84■□□□□ 0.61
LMBR1-209ENST00000434453 FLNCQ14315 2725 aa18.84■□□□□ 0.61
LMBR1-209ENST00000434453 H3BUA1 57 aa18.83■□□□□ 0.6
LMBR1-209ENST00000434453 HSD52Q0P140 79 aa18.82■□□□□ 0.6
LMBR1-209ENST00000434453 FAM19A4Q96LR4 140 aa18.82■□□□□ 0.6
LMBR1-209ENST00000434453 CSPG4Q6UVK1 2322 aa18.82■□□□□ 0.6
LMBR1-209ENST00000434453 LAGE3Q14657 143 aa18.82■□□□□ 0.6
LMBR1-209ENST00000434453 OR4X2Q8NGF9 303 aa18.82■□□□□ 0.6
LMBR1-209ENST00000434453 OR10J6PQ8NGY7 276 aa18.82■□□□□ 0.6
LMBR1-209ENST00000434453 F6UB75 175 aa18.81■□□□□ 0.6
LMBR1-209ENST00000434453 OVOL1O14753 267 aa18.81■□□□□ 0.6
LMBR1-209ENST00000434453 PF4V1P10720 104 aa18.81■□□□□ 0.6
LMBR1-209ENST00000434453 KIR3DS1Q14943 382 aa18.81■□□□□ 0.6
LMBR1-209ENST00000434453 TTTY13Q9BZ97 58 aa18.81■□□□□ 0.6
LMBR1-209ENST00000434453 PEF1Q9UBV8 284 aaKnown RBP18.81■□□□□ 0.6
LMBR1-209ENST00000434453 CRYBG3Q68DQ2 2970 aa18.81■□□□□ 0.6
LMBR1-209ENST00000434453 NDUFS8O00217 210 aa18.8■□□□□ 0.6
LMBR1-209ENST00000434453 IGKCP01834 107 aa18.8■□□□□ 0.6
LMBR1-209ENST00000434453 SELENOKQ9Y6D0 94 aa18.8■□□□□ 0.6
LMBR1-209ENST00000434453 IGLV1-40P01703 118 aa18.8■□□□□ 0.6
LMBR1-209ENST00000434453 ATP5J2P56134 94 aa18.8■□□□□ 0.6
LMBR1-209ENST00000434453 RBX1P62877 108 aa18.8■□□□□ 0.6
LMBR1-209ENST00000434453 TM4SF20Q53R12 229 aa18.8■□□□□ 0.6
LMBR1-209ENST00000434453 CLEC2AQ6UVW9 174 aa18.8■□□□□ 0.6
LMBR1-209ENST00000434453 MRAP2Q96G30 205 aa18.8■□□□□ 0.6
LMBR1-209ENST00000434453 USP9XQ93008 2570 aaPredicted RBP18.79■□□□□ 0.6
LMBR1-209ENST00000434453 TRAV21A0A0B4J279 112 aa18.79■□□□□ 0.6
LMBR1-209ENST00000434453 ATP5LO75964 103 aa18.79■□□□□ 0.6
LMBR1-209ENST00000434453 AVPP01185 164 aa18.79■□□□□ 0.6
LMBR1-209ENST00000434453 MUC4Q99102 2169 aa18.79■□□□□ 0.6
LMBR1-209ENST00000434453 TMEM8BA6NDV4 472 aa18.78■□□□□ 0.6
LMBR1-209ENST00000434453 MSMBP08118 114 aa18.78■□□□□ 0.6
LMBR1-209ENST00000434453 SPOCK3Q9BQ16 436 aa18.78■□□□□ 0.6
LMBR1-209ENST00000434453 DOPEY1Q5JWR5 2465 aa18.78■□□□□ 0.6
LMBR1-209ENST00000434453 M0R381 172 aa18.78■□□□□ 0.6
LMBR1-209ENST00000434453 RPL11P62913 178 aaKnown RBP18.78■□□□□ 0.6
LMBR1-209ENST00000434453 ANXA2RQ3ZCQ2 193 aa18.78■□□□□ 0.6
LMBR1-209ENST00000434453 IGKV3-7A0A075B6H7 116 aa18.77■□□□□ 0.6
LMBR1-209ENST00000434453 DPM2O94777 84 aa18.77■□□□□ 0.6
LMBR1-209ENST00000434453 EDN2P20800 178 aa18.77■□□□□ 0.6
LMBR1-209ENST00000434453 RHPN1-AS1Q9BWJ2 59 aa18.77■□□□□ 0.6
LMBR1-209ENST00000434453 H3BRM9 83 aa18.77■□□□□ 0.59
LMBR1-209ENST00000434453 CFHR3Q02985 330 aa18.77■□□□□ 0.59
LMBR1-209ENST00000434453 APRG1Q8IVJ8 170 aa18.77■□□□□ 0.59
LMBR1-209ENST00000434453 SMIM2Q9BVW6 85 aa18.77■□□□□ 0.59
LMBR1-209ENST00000434453 SMPXQ9UHP9 88 aa18.77■□□□□ 0.59
LMBR1-209ENST00000434453 A6NDN8 102 aa18.76■□□□□ 0.59
LMBR1-209ENST00000434453 RASL10AQ92737 203 aa18.76■□□□□ 0.59
LMBR1-209ENST00000434453 JMJD8Q96S16 334 aa18.76■□□□□ 0.59
LMBR1-209ENST00000434453 MRPL35Q9NZE8 188 aaKnown RBP18.76■□□□□ 0.59
LMBR1-209ENST00000434453 CBY1Q9Y3M2 126 aa18.76■□□□□ 0.59
LMBR1-209ENST00000434453 CSMD2Q7Z408 3487 aa18.76■□□□□ 0.59
LMBR1-209ENST00000434453 RNASE4P34096 147 aaKnown RBP18.76■□□□□ 0.59
LMBR1-209ENST00000434453 SRSF1Q07955 248 aaKnown RBP eCLIP18.76■□□□□ 0.593e-6■□□□□ 8.3
LMBR1-209ENST00000434453 GTSCR1Q86UQ5 136 aa18.76■□□□□ 0.59
LMBR1-209ENST00000434453 PSMG4Q5JS54 123 aa18.75■□□□□ 0.59
LMBR1-209ENST00000434453 ZC2HC1BQ5TFG8 222 aa18.75■□□□□ 0.59
LMBR1-209ENST00000434453 C9orf118A6NHY6 69 aa18.74■□□□□ 0.59
LMBR1-209ENST00000434453 MYOZ3Q8TDC0 251 aa18.74■□□□□ 0.59
LMBR1-209ENST00000434453 GNRH2O43555 120 aa18.74■□□□□ 0.59
LMBR1-209ENST00000434453 ASIPP42127 132 aa18.74■□□□□ 0.59
LMBR1-209ENST00000434453 C14orf178Q8N769 122 aaPredicted RBP18.74■□□□□ 0.59
LMBR1-209ENST00000434453 UTP20O75691 2785 aaKnown RBP18.74■□□□□ 0.59
LMBR1-209ENST00000434453 RNF223E7ERA6 249 aa18.73■□□□□ 0.59
LMBR1-209ENST00000434453 RNASE3P12724 160 aaKnown RBP18.73■□□□□ 0.59
LMBR1-209ENST00000434453 DAZ1Q9NQZ3 744 aaKnown RBP18.73■□□□□ 0.59
LMBR1-209ENST00000434453 TMEM160Q9NX00 188 aa18.73■□□□□ 0.59
LMBR1-209ENST00000434453 SRD5A1P18405 259 aa18.73■□□□□ 0.59
LMBR1-209ENST00000434453 S100A4P26447 101 aaKnown RBP18.73■□□□□ 0.59
LMBR1-209ENST00000434453 TMEM95Q3KNT9 176 aa18.73■□□□□ 0.59
LMBR1-209ENST00000434453 RPL39LQ96EH5 51 aaKnown RBP18.73■□□□□ 0.59
LMBR1-209ENST00000434453 IGSF10Q6WRI0 2623 aa18.72■□□□□ 0.59
LMBR1-209ENST00000434453 NAA38Q9BRA0 125 aaKnown RBP18.72■□□□□ 0.59
LMBR1-209ENST00000434453 HIGD1BQ9P298 99 aa18.72■□□□□ 0.59
LMBR1-209ENST00000434453 PHLDA3Q9Y5J5 127 aa18.72■□□□□ 0.59
LMBR1-209ENST00000434453 A0A087WX48 190 aa18.72■□□□□ 0.59
LMBR1-209ENST00000434453 A0A0G2JLM5 398 aa18.72■□□□□ 0.59
LMBR1-209ENST00000434453 SUMO2P61956 95 aaKnown RBP18.72■□□□□ 0.59
LMBR1-209ENST00000434453 DPH3P1Q9H4G8 78 aa18.72■□□□□ 0.59
LMBR1-209ENST00000434453 MED14OSP0DP75 135 aa18.71■□□□□ 0.59
LMBR1-209ENST00000434453 UFSP1Q6NVU6 142 aa18.7■□□□□ 0.58
LMBR1-209ENST00000434453 CST9LQ9H4G1 147 aa18.7■□□□□ 0.58
LMBR1-209ENST00000434453 TRBV25-1A0A075B6N4 114 aa18.7■□□□□ 0.58
LMBR1-209ENST00000434453 TRBV7-9A0A0J9YWB2 115 aa18.7■□□□□ 0.58
LMBR1-209ENST00000434453 H3BUT2 72 aa18.7■□□□□ 0.58
LMBR1-209ENST00000434453 CACNA1AO00555 2505 aa18.7■□□□□ 0.58
LMBR1-209ENST00000434453 C20orf78Q9BR46 151 aa18.69■□□□□ 0.58
LMBR1-209ENST00000434453 CHAC1Q9BUX1 264 aa18.69■□□□□ 0.58
LMBR1-209ENST00000434453 GAGE12BA1L429 117 aa18.68■□□□□ 0.58
LMBR1-209ENST00000434453 FXYD2P54710 66 aa18.68■□□□□ 0.58
LMBR1-209ENST00000434453 MAPKAPK5-AS1Q8N8E1 139 aa18.68■□□□□ 0.58
LMBR1-209ENST00000434453 DCANP1Q8TF63 244 aa18.68■□□□□ 0.58
LMBR1-209ENST00000434453 RAB37Q96AX2 223 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 216.2 ms