RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 K7EP34 96 aa10.39□□□□□ -0.75
COL6A3-207ENST00000433762 IGHV4-39P01824 125 aa10.39□□□□□ -0.75
COL6A3-207ENST00000433762 OCIAD2Q56VL3 154 aa10.39□□□□□ -0.75
COL6A3-207ENST00000433762 IGSF10Q6WRI0 2623 aa10.39□□□□□ -0.75
COL6A3-207ENST00000433762 GAGE12BA1L429 117 aa10.39□□□□□ -0.75
COL6A3-207ENST00000433762 GATA1P15976 413 aaPredicted RBP10.39□□□□□ -0.75
COL6A3-207ENST00000433762 GPHB5Q86YW7 130 aa10.39□□□□□ -0.75
COL6A3-207ENST00000433762 POM121L12Q8N7R1 296 aa10.39□□□□□ -0.75
COL6A3-207ENST00000433762 DPH3P1Q9H4G8 78 aa10.39□□□□□ -0.75
COL6A3-207ENST00000433762 LRBAP50851 2863 aa10.38□□□□□ -0.75
COL6A3-207ENST00000433762 A0A0G2JLM5 398 aa10.38□□□□□ -0.75
COL6A3-207ENST00000433762 GNLYP22749 145 aa10.38□□□□□ -0.75
COL6A3-207ENST00000433762 RPL32P62910 135 aaKnown RBP10.38□□□□□ -0.75
COL6A3-207ENST00000433762 C20orf173Q96LM9 149 aa10.38□□□□□ -0.75
COL6A3-207ENST00000433762 UFC1Q9Y3C8 167 aa10.38□□□□□ -0.75
COL6A3-207ENST00000433762 TACC2O95359 2948 aa10.38□□□□□ -0.75
COL6A3-207ENST00000433762 IGHV3OR16-13A0A075B7E8 117 aa10.38□□□□□ -0.75
COL6A3-207ENST00000433762 IGHV3-74A0A0B4J1X5 117 aa10.38□□□□□ -0.75
COL6A3-207ENST00000433762 A6NDX4 124 aa10.38□□□□□ -0.75
COL6A3-207ENST00000433762 K7ERU9 68 aa10.38□□□□□ -0.75
COL6A3-207ENST00000433762 ZNF207O43670 478 aaKnown RBP10.38□□□□□ -0.75
COL6A3-207ENST00000433762 NXPH4O95158 308 aa10.38□□□□□ -0.75
COL6A3-207ENST00000433762 ASIPP42127 132 aa10.38□□□□□ -0.75
COL6A3-207ENST00000433762 UQCRFS1P47985 274 aa10.38□□□□□ -0.75
COL6A3-207ENST00000433762 TM2D2Q9BX73 214 aa10.38□□□□□ -0.75
COL6A3-207ENST00000433762 HIVEP3Q5T1R4 2406 aa10.37□□□□□ -0.75
COL6A3-207ENST00000433762 H3BVH4 76 aa10.37□□□□□ -0.75
COL6A3-207ENST00000433762 PRR9Q5T870 116 aa10.37□□□□□ -0.75
COL6A3-207ENST00000433762 IGHV3-49A0A0A0MS15 119 aa10.37□□□□□ -0.75
COL6A3-207ENST00000433762 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.37□□□□□ -0.75
COL6A3-207ENST00000433762 ZC2HC1BQ5TFG8 222 aa10.37□□□□□ -0.75
COL6A3-207ENST00000433762 TMEM219Q86XT9 240 aa10.37□□□□□ -0.75
COL6A3-207ENST00000433762 TOMM6Q96B49 74 aa10.37□□□□□ -0.75
COL6A3-207ENST00000433762 BBC3Q96PG8 261 aaPredicted RBP10.37□□□□□ -0.75
COL6A3-207ENST00000433762 CHAC1Q9BUX1 264 aa10.37□□□□□ -0.75
COL6A3-207ENST00000433762 K7EMT4 169 aa10.36□□□□□ -0.75
COL6A3-207ENST00000433762 SMIM13P0DJ93 91 aa10.36□□□□□ -0.75
COL6A3-207ENST00000433762 SUMO2P61956 95 aaKnown RBP10.36□□□□□ -0.75
COL6A3-207ENST00000433762 WFDC3Q8IUB2 231 aa10.36□□□□□ -0.75
COL6A3-207ENST00000433762 C10orf105Q8TEF2 133 aa10.36□□□□□ -0.75
COL6A3-207ENST00000433762 TRBV25-1A0A075B6N4 114 aa10.36□□□□□ -0.75
COL6A3-207ENST00000433762 IGKV2D-26A0A0A0MRZ7 120 aa10.36□□□□□ -0.75
COL6A3-207ENST00000433762 A0A1W2PPM0 123 aa10.36□□□□□ -0.75
COL6A3-207ENST00000433762 F8VRH5 84 aa10.36□□□□□ -0.75
COL6A3-207ENST00000433762 H7C1H1 209 aa10.36□□□□□ -0.75
COL6A3-207ENST00000433762 IGLV1-40P01703 118 aa10.36□□□□□ -0.75
COL6A3-207ENST00000433762 PRB1P04280 392 aa10.36□□□□□ -0.75
COL6A3-207ENST00000433762 PCP4P48539 62 aa10.36□□□□□ -0.75
COL6A3-207ENST00000433762 TRAV40A0A0B4J280 105 aa10.35□□□□□ -0.75
COL6A3-207ENST00000433762 UNQ9165/PRO28630Q6UXU0 137 aa10.35□□□□□ -0.75
COL6A3-207ENST00000433762 ERASQ7Z444 233 aa10.35□□□□□ -0.75
COL6A3-207ENST00000433762 MRPL35Q9NZE8 188 aaKnown RBP10.35□□□□□ -0.75
COL6A3-207ENST00000433762 EPG5Q9HCE0 2579 aa10.35□□□□□ -0.75
COL6A3-207ENST00000433762 H3BUT2 72 aa10.34□□□□□ -0.75
COL6A3-207ENST00000433762 JMJD8Q96S16 334 aa10.34□□□□□ -0.75
COL6A3-207ENST00000433762 C19orf84I3L1E1 186 aa10.33□□□□□ -0.76
COL6A3-207ENST00000433762 FABP2P12104 132 aa10.33□□□□□ -0.76
COL6A3-207ENST00000433762 S100A4P26447 101 aaKnown RBP10.33□□□□□ -0.76
COL6A3-207ENST00000433762 CEND1Q8N111 149 aa10.33□□□□□ -0.76
COL6A3-207ENST00000433762 RASL10AQ92737 203 aa10.33□□□□□ -0.76
COL6A3-207ENST00000433762 DAZ1Q9NQZ3 744 aaKnown RBP10.33□□□□□ -0.76
COL6A3-207ENST00000433762 PHLDA3Q9Y5J5 127 aa10.33□□□□□ -0.76
COL6A3-207ENST00000433762 ABCA2Q9BZC7 2435 aa10.33□□□□□ -0.76
COL6A3-207ENST00000433762 TRAV26-2A0A0B4J265 109 aa10.33□□□□□ -0.76
COL6A3-207ENST00000433762 IGHV4-61A0A0C4DH41 118 aa10.33□□□□□ -0.76
COL6A3-207ENST00000433762 TMEM89A2RUT3 159 aa10.33□□□□□ -0.76
COL6A3-207ENST00000433762 CFHR3Q02985 330 aa10.33□□□□□ -0.76
COL6A3-207ENST00000433762 ODF3Q96PU9 254 aa10.33□□□□□ -0.76
COL6A3-207ENST00000433762 IGHV4OR15-8A0A075B7B6 117 aa10.32□□□□□ -0.76
COL6A3-207ENST00000433762 A0A087WW49 117 aa10.32□□□□□ -0.76
COL6A3-207ENST00000433762 KLLNB2CW77 178 aa10.32□□□□□ -0.76
COL6A3-207ENST00000433762 GATA3P23771 443 aa10.32□□□□□ -0.76
COL6A3-207ENST00000433762 GTSCR1Q86UQ5 136 aa10.32□□□□□ -0.76
COL6A3-207ENST00000433762 SPOCK3Q9BQ16 436 aa10.32□□□□□ -0.76
COL6A3-207ENST00000433762 TMEM160Q9NX00 188 aa10.32□□□□□ -0.76
COL6A3-207ENST00000433762 SPTBN1Q01082 2364 aaKnown RBP10.32□□□□□ -0.76
COL6A3-207ENST00000433762 ZFYVE26Q68DK2 2539 aa10.32□□□□□ -0.76
COL6A3-207ENST00000433762 TRBV12-3P01733 135 aa10.32□□□□□ -0.76
COL6A3-207ENST00000433762 ID1P41134 155 aa10.32□□□□□ -0.76
COL6A3-207ENST00000433762 ANXA2RQ3ZCQ2 193 aa10.32□□□□□ -0.76
COL6A3-207ENST00000433762 CLEC2AQ6UVW9 174 aa10.32□□□□□ -0.76
COL6A3-207ENST00000433762 ZNF843Q8N446 348 aa10.32□□□□□ -0.76
COL6A3-207ENST00000433762 NEXN-AS1Q8NBZ9 246 aa10.32□□□□□ -0.76
COL6A3-207ENST00000433762 PHLDA1Q8WV24 401 aaPredicted RBP10.32□□□□□ -0.76
COL6A3-207ENST00000433762 SPCS1Q9Y6A9 102 aa10.31□□□□□ -0.76
COL6A3-207ENST00000433762 GCSHP23434 173 aa10.31□□□□□ -0.76
COL6A3-207ENST00000433762 FXYD2P54710 66 aa10.31□□□□□ -0.76
COL6A3-207ENST00000433762 SAMD5Q5TGI4 173 aa10.31□□□□□ -0.76
COL6A3-207ENST00000433762 BRD3OSQ6XYD6 125 aa10.31□□□□□ -0.76
COL6A3-207ENST00000433762 SCGB3A1Q96QR1 104 aa10.31□□□□□ -0.76
COL6A3-207ENST00000433762 CCL19Q99731 98 aa10.31□□□□□ -0.76
COL6A3-207ENST00000433762 RHPN1-AS1Q9BWJ2 59 aa10.31□□□□□ -0.76
COL6A3-207ENST00000433762 CFAP46Q8IYW2 2715 aa10.31□□□□□ -0.76
COL6A3-207ENST00000433762 H3BUX3 64 aa10.3□□□□□ -0.76
COL6A3-207ENST00000433762 RNASE3P12724 160 aaKnown RBP10.3□□□□□ -0.76
COL6A3-207ENST00000433762 Q6ZQT7 251 aa10.3□□□□□ -0.76
COL6A3-207ENST00000433762 NEGR1Q7Z3B1 354 aa10.3□□□□□ -0.76
COL6A3-207ENST00000433762 CHTOPQ9Y3Y2 248 aaKnown RBP10.3□□□□□ -0.76
COL6A3-207ENST00000433762 RNF223E7ERA6 249 aa10.3□□□□□ -0.76
COL6A3-207ENST00000433762 MSMBP08118 114 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms