RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 TMEM191AQ9H0A3 160 aa14.65□□□□□ -0.06
VRK2-205ENST00000432057 AGRNO00468 2067 aa14.65□□□□□ -0.06
VRK2-205ENST00000432057 TRBV7-9A0A0J9YWB2 115 aa14.65□□□□□ -0.06
VRK2-205ENST00000432057 H3BVH4 76 aa14.65□□□□□ -0.06
VRK2-205ENST00000432057 SNRPD3P62318 126 aaKnown RBP14.65□□□□□ -0.06
VRK2-205ENST00000432057 U3KQK5 164 aa14.65□□□□□ -0.06
VRK2-205ENST00000432057 RNASE1P07998 156 aaKnown RBP14.64□□□□□ -0.07
VRK2-205ENST00000432057 WFDC12Q8WWY7 111 aa14.64□□□□□ -0.07
VRK2-205ENST00000432057 MTORP42345 2549 aa14.64□□□□□ -0.07
VRK2-205ENST00000432057 SMKR1H3BMG3 65 aa14.63□□□□□ -0.07
VRK2-205ENST00000432057 LINC00614P0C842 121 aa14.63□□□□□ -0.07
VRK2-205ENST00000432057 C3orf79P0CE67 100 aa14.63□□□□□ -0.07
VRK2-205ENST00000432057 PKIAP61925 76 aa14.63□□□□□ -0.07
VRK2-205ENST00000432057 ORMDL3Q8N138 153 aa14.63□□□□□ -0.07
VRK2-205ENST00000432057 ZNF664Q8N3J9 261 aa14.63□□□□□ -0.07
VRK2-205ENST00000432057 C11orf44Q8N8P7 122 aa14.63□□□□□ -0.07
VRK2-205ENST00000432057 PRELID3AQ96N28 172 aa14.63□□□□□ -0.07
VRK2-205ENST00000432057 IGHV1-24A0A0C4DH33 117 aa14.63□□□□□ -0.07
VRK2-205ENST00000432057 SNAI2O43623 268 aa14.63□□□□□ -0.07
VRK2-205ENST00000432057 NCR2O95944 276 aa14.63□□□□□ -0.07
VRK2-205ENST00000432057 OR5AL1P0C617 328 aa14.63□□□□□ -0.07
VRK2-205ENST00000432057 ANXA2RQ3ZCQ2 193 aa14.63□□□□□ -0.07
VRK2-205ENST00000432057 DMRTA1Q5VZB9 504 aa14.63□□□□□ -0.07
VRK2-205ENST00000432057 Q8N976 141 aa14.63□□□□□ -0.07
VRK2-205ENST00000432057 OR9G4Q8NGQ1 327 aa14.63□□□□□ -0.07
VRK2-205ENST00000432057 DLX4Q92988 240 aaPredicted RBP14.63□□□□□ -0.07
VRK2-205ENST00000432057 RNF185Q96GF1 192 aa14.63□□□□□ -0.07
VRK2-205ENST00000432057 A0A0J9YX75 114 aa14.62□□□□□ -0.07
VRK2-205ENST00000432057 KLLNB2CW77 178 aa14.62□□□□□ -0.07
VRK2-205ENST00000432057 PEMTQ9UBM1 199 aa14.62□□□□□ -0.07
VRK2-205ENST00000432057 TIMM8BQ9Y5J9 83 aaPredicted RBP14.62□□□□□ -0.07
VRK2-205ENST00000432057 CD28P10747 220 aa14.61□□□□□ -0.07
VRK2-205ENST00000432057 TSTD3H0UI37 97 aa14.61□□□□□ -0.07
VRK2-205ENST00000432057 RAB4AP20338 218 aa14.61□□□□□ -0.07
VRK2-205ENST00000432057 CKS2P33552 79 aa14.61□□□□□ -0.07
VRK2-205ENST00000432057 SCGB2A2Q13296 93 aa14.61□□□□□ -0.07
VRK2-205ENST00000432057 A0A1W2PRX2 142 aa14.6□□□□□ -0.07
VRK2-205ENST00000432057 IGKV3-20P01619 116 aa14.6□□□□□ -0.07
VRK2-205ENST00000432057 EBLN2Q6P2I7 272 aa14.6□□□□□ -0.07
VRK2-205ENST00000432057 TEX43Q6ZNM6 134 aa14.6□□□□□ -0.07
VRK2-205ENST00000432057 LOC389332A0A1B0GUA5 103 aa14.59□□□□□ -0.07
VRK2-205ENST00000432057 SPANXN1Q5VSR9 72 aa14.59□□□□□ -0.07
VRK2-205ENST00000432057 RAX2Q96IS3 184 aa14.59□□□□□ -0.07
VRK2-205ENST00000432057 TMEM160Q9NX00 188 aa14.59□□□□□ -0.07
VRK2-205ENST00000432057 NOTCH2Q04721 2471 aa14.59□□□□□ -0.07
VRK2-205ENST00000432057 SORL1Q92673 2214 aa14.59□□□□□ -0.07
VRK2-205ENST00000432057 SPRY2O43597 315 aa14.59□□□□□ -0.07
VRK2-205ENST00000432057 NPYP01303 97 aa14.59□□□□□ -0.07
VRK2-205ENST00000432057 IFI27P40305 119 aaPredicted RBP14.59□□□□□ -0.07
VRK2-205ENST00000432057 ASIPP42127 132 aa14.59□□□□□ -0.07
VRK2-205ENST00000432057 CACNG7P62955 275 aa14.59□□□□□ -0.07
VRK2-205ENST00000432057 PRSS3P2Q8NHM4 247 aa14.59□□□□□ -0.07
VRK2-205ENST00000432057 LINC01006Q8NI28 216 aa14.59□□□□□ -0.07
VRK2-205ENST00000432057 ZNF418Q8TF45 676 aaPredicted RBP14.59□□□□□ -0.07
VRK2-205ENST00000432057 SIGLEC8Q9NYZ4 499 aa14.59□□□□□ -0.07
VRK2-205ENST00000432057 GAS8-AS1O95177 125 aa14.58□□□□□ -0.08
VRK2-205ENST00000432057 EVI2AP22794 236 aa14.58□□□□□ -0.08
VRK2-205ENST00000432057 LEPP41159 167 aa14.58□□□□□ -0.08
VRK2-205ENST00000432057 FA2HQ7L5A8 372 aa14.58□□□□□ -0.08
VRK2-205ENST00000432057 ODF3Q96PU9 254 aa14.58□□□□□ -0.08
VRK2-205ENST00000432057 C16orf95Q9H693 158 aa14.58□□□□□ -0.08
VRK2-205ENST00000432057 IGHV4-4A0A075B6R2 117 aa14.57□□□□□ -0.08
VRK2-205ENST00000432057 GNRH2O43555 120 aa14.57□□□□□ -0.08
VRK2-205ENST00000432057 S100A4P26447 101 aaKnown RBP14.57□□□□□ -0.08
VRK2-205ENST00000432057 HILS1P60008 231 aa14.57□□□□□ -0.08
VRK2-205ENST00000432057 TDRG1Q3Y452 100 aa14.57□□□□□ -0.08
VRK2-205ENST00000432057 LINC00173Q6ZV60 143 aa14.57□□□□□ -0.08
VRK2-205ENST00000432057 TMEM61Q8N0U2 210 aa14.57□□□□□ -0.08
VRK2-205ENST00000432057 AP5S1Q9NUS5 200 aa14.57□□□□□ -0.08
VRK2-205ENST00000432057 TRAV12-3A0A0B4J271 114 aa14.57□□□□□ -0.08
VRK2-205ENST00000432057 DYNLRB2Q8TF09 96 aa14.57□□□□□ -0.08
VRK2-205ENST00000432057 C7orf71A4D174 169 aa14.56□□□□□ -0.08
VRK2-205ENST00000432057 LY6G6DO95868 133 aa14.56□□□□□ -0.08
VRK2-205ENST00000432057 CITED2Q99967 270 aaPredicted RBP14.56□□□□□ -0.08
VRK2-205ENST00000432057 MUC4Q99102 2169 aa14.56□□□□□ -0.08
VRK2-205ENST00000432057 OTOGQ6ZRI0 2925 aa14.55□□□□□ -0.08
VRK2-205ENST00000432057 TRAV12-2A0A075B6T6 113 aa14.55□□□□□ -0.08
VRK2-205ENST00000432057 FOXI2Q6ZQN5 318 aa14.55□□□□□ -0.08
VRK2-205ENST00000432057 SMIM15Q7Z3B0 74 aa14.55□□□□□ -0.08
VRK2-205ENST00000432057 M0R381 172 aa14.55□□□□□ -0.08
VRK2-205ENST00000432057 DUSP14O95147 198 aaKnown RBP14.55□□□□□ -0.08
VRK2-205ENST00000432057 LEPROTL1O95214 131 aa14.55□□□□□ -0.08
VRK2-205ENST00000432057 DDTP30046 118 aa14.55□□□□□ -0.08
VRK2-205ENST00000432057 FHL3Q13643 280 aa14.55□□□□□ -0.08
VRK2-205ENST00000432057 WNK1Q9H4A3 2382 aa14.54□□□□□ -0.08
VRK2-205ENST00000432057 KIR2DL5BA0A0G2JN68 375 aa14.54□□□□□ -0.08
VRK2-205ENST00000432057 KIR2DL5BA0A0G2JPC4 375 aa14.54□□□□□ -0.08
VRK2-205ENST00000432057 PPBPP02775 128 aa14.54□□□□□ -0.08
VRK2-205ENST00000432057 MED14OSP0DP75 135 aa14.54□□□□□ -0.08
VRK2-205ENST00000432057 RNASE3P12724 160 aaKnown RBP14.54□□□□□ -0.08
VRK2-205ENST00000432057 GATA1P15976 413 aaPredicted RBP14.54□□□□□ -0.08
VRK2-205ENST00000432057 BTF3P20290 206 aaKnown RBP14.54□□□□□ -0.08
VRK2-205ENST00000432057 SPINK13Q1W4C9 94 aa14.54□□□□□ -0.08
VRK2-205ENST00000432057 FAM159AQ6UWV7 190 aa14.54□□□□□ -0.08
VRK2-205ENST00000432057 SPATA12Q7Z6I5 190 aa14.54□□□□□ -0.08
VRK2-205ENST00000432057 KIR2DL5AQ8N109 375 aa14.54□□□□□ -0.08
VRK2-205ENST00000432057 SCRT2Q9NQ03 307 aa14.54□□□□□ -0.08
VRK2-205ENST00000432057 PHLDA3Q9Y5J5 127 aa14.54□□□□□ -0.08
VRK2-205ENST00000432057 KNCNA6PVL3 124 aa14.53□□□□□ -0.08
VRK2-205ENST00000432057 DEFB131AP59861 70 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms