RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 CMTM2Q8TAZ6 248 aa11.57□□□□□ -0.56
CPSF4-203ENST00000430038 TREM1Q9NP99 234 aa11.57□□□□□ -0.56
CPSF4-203ENST00000430038 SCRT2Q9NQ03 307 aa11.57□□□□□ -0.56
CPSF4-203ENST00000430038 IGLV2-11P01706 119 aa11.56□□□□□ -0.56
CPSF4-203ENST00000430038 STAG3L2P0CL84 134 aa11.56□□□□□ -0.56
CPSF4-203ENST00000430038 STAG3L3P0CL85 134 aa11.56□□□□□ -0.56
CPSF4-203ENST00000430038 DPPA3Q6W0C5 159 aa11.56□□□□□ -0.56
CPSF4-203ENST00000430038 HSD17B11Q8NBQ5 300 aa11.56□□□□□ -0.56
CPSF4-203ENST00000430038 SUN5Q8TC36 379 aa11.56□□□□□ -0.56
CPSF4-203ENST00000430038 TRAV4A0A0B4J268 109 aa11.55□□□□□ -0.56
CPSF4-203ENST00000430038 M0R2P5 195 aa11.55□□□□□ -0.56
CPSF4-203ENST00000430038 ARL6IP6Q8N6S5 226 aa11.55□□□□□ -0.56
CPSF4-203ENST00000430038 TMEM75Q8N9X5 138 aa11.55□□□□□ -0.56
CPSF4-203ENST00000430038 RAB24Q969Q5 203 aa11.55□□□□□ -0.56
CPSF4-203ENST00000430038 SH3BGRL3Q9H299 93 aa11.55□□□□□ -0.56
CPSF4-203ENST00000430038 TRAV21A0A0B4J279 112 aa11.54□□□□□ -0.56
CPSF4-203ENST00000430038 ATP6V0CP27449 155 aa11.54□□□□□ -0.56
CPSF4-203ENST00000430038 SRIP30626 198 aa11.54□□□□□ -0.56
CPSF4-203ENST00000430038 XGP55808 180 aa11.54□□□□□ -0.56
CPSF4-203ENST00000430038 OR4C5Q8NGB2 326 aa11.54□□□□□ -0.56
CPSF4-203ENST00000430038 OR2G3Q8NGZ4 309 aa11.54□□□□□ -0.56
CPSF4-203ENST00000430038 A0A087WTM6 91 aa11.53□□□□□ -0.56
CPSF4-203ENST00000430038 TCRAP04437 139 aa11.53□□□□□ -0.56
CPSF4-203ENST00000430038 GATA1P15976 413 aaPredicted RBP11.53□□□□□ -0.56
CPSF4-203ENST00000430038 GCHFRP30047 84 aa11.53□□□□□ -0.56
CPSF4-203ENST00000430038 CDC34P49427 236 aaPredicted RBP11.53□□□□□ -0.56
CPSF4-203ENST00000430038 FAM74A1Q5RGS3 127 aa11.53□□□□□ -0.56
CPSF4-203ENST00000430038 AQP10Q96PS8 301 aa11.53□□□□□ -0.56
CPSF4-203ENST00000430038 LY96Q9Y6Y9 160 aa11.53□□□□□ -0.56
CPSF4-203ENST00000430038 GGTLC3B5MD39 225 aa11.52□□□□□ -0.57
CPSF4-203ENST00000430038 KRTAP10-1P60331 282 aa11.52□□□□□ -0.57
CPSF4-203ENST00000430038 VPS13BQ7Z7G8 4022 aa11.51□□□□□ -0.57
CPSF4-203ENST00000430038 PGPEP1LA6NFU8 196 aa11.51□□□□□ -0.57
CPSF4-203ENST00000430038 C9JCJ5 164 aa11.51□□□□□ -0.57
CPSF4-203ENST00000430038 ORM1P02763 201 aa11.51□□□□□ -0.57
CPSF4-203ENST00000430038 SUMO1P63165 101 aaKnown RBP11.51□□□□□ -0.57
CPSF4-203ENST00000430038 ASB13Q8WXK3 278 aa11.51□□□□□ -0.57
CPSF4-203ENST00000430038 LINC00479Q96M42 142 aa11.51□□□□□ -0.57
CPSF4-203ENST00000430038 SDF2L1Q9HCN8 221 aa11.51□□□□□ -0.57
CPSF4-203ENST00000430038 PGPEP1Q9NXJ5 209 aa11.51□□□□□ -0.57
CPSF4-203ENST00000430038 MSRB1Q9NZV6 116 aa11.51□□□□□ -0.57
CPSF4-203ENST00000430038 PSG8Q9UQ74 426 aa11.51□□□□□ -0.57
CPSF4-203ENST00000430038 IGHV3-73A0A0B4J1V6 119 aa11.5□□□□□ -0.57
CPSF4-203ENST00000430038 RS1O15537 224 aa11.5□□□□□ -0.57
CPSF4-203ENST00000430038 RNASE3P12724 160 aaKnown RBP11.5□□□□□ -0.57
CPSF4-203ENST00000430038 ZNF726P1Q15940 193 aa11.5□□□□□ -0.57
CPSF4-203ENST00000430038 CFAP126Q5VTH2 177 aa11.5□□□□□ -0.57
CPSF4-203ENST00000430038 Q6ZSN1 163 aa11.5□□□□□ -0.57
CPSF4-203ENST00000430038 SLC25A29Q8N8R3 303 aa11.5□□□□□ -0.57
CPSF4-203ENST00000430038 C5orf17Q8NAS9 161 aa11.5□□□□□ -0.57
CPSF4-203ENST00000430038 C9orf85Q96MD7 179 aa11.5□□□□□ -0.57
CPSF4-203ENST00000430038 PSMG3Q9BT73 122 aaPredicted RBP11.5□□□□□ -0.57
CPSF4-203ENST00000430038 EPDR1Q9UM22 224 aa11.5□□□□□ -0.57
CPSF4-203ENST00000430038 DNAH8Q96JB1 4490 aa11.5□□□□□ -0.57
CPSF4-203ENST00000430038 RNF222A6NCQ9 220 aa11.49□□□□□ -0.57
CPSF4-203ENST00000430038 GCGP01275 180 aa11.49□□□□□ -0.57
CPSF4-203ENST00000430038 ERVFC1-1P60608 527 aa11.49□□□□□ -0.57
CPSF4-203ENST00000430038 ZNF876PQ49A33 203 aa11.49□□□□□ -0.57
CPSF4-203ENST00000430038 RPL7L1Q6DKI1 246 aaKnown RBP11.49□□□□□ -0.57
CPSF4-203ENST00000430038 PCNPQ8WW12 178 aaKnown RBP11.49□□□□□ -0.57
CPSF4-203ENST00000430038 KCNS1Q96KK3 526 aa11.49□□□□□ -0.57
CPSF4-203ENST00000430038 Q9UF83 564 aa11.49□□□□□ -0.57
CPSF4-203ENST00000430038 TRAV34A0A0B4J273 112 aa11.48□□□□□ -0.57
CPSF4-203ENST00000430038 PRNTQ86SH4 94 aa11.48□□□□□ -0.57
CPSF4-203ENST00000430038 TXNDC17Q9BRA2 123 aa11.48□□□□□ -0.57
CPSF4-203ENST00000430038 MED28Q9H204 178 aa11.48□□□□□ -0.57
CPSF4-203ENST00000430038 HERC1Q15751 4861 aa11.48□□□□□ -0.57
CPSF4-203ENST00000430038 IGKV3D-20A0A0C4DH25 116 aa11.47□□□□□ -0.57
CPSF4-203ENST00000430038 G3V3Q6 166 aa11.47□□□□□ -0.57
CPSF4-203ENST00000430038 CRYGDP07320 174 aa11.47□□□□□ -0.57
CPSF4-203ENST00000430038 SERF2P84101 59 aa11.47□□□□□ -0.57
CPSF4-203ENST00000430038 FLI1Q01543 452 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-203ENST00000430038 ZNF506Q5JVG8 444 aa11.47□□□□□ -0.57
CPSF4-203ENST00000430038 NFE4Q86UQ8 179 aa11.47□□□□□ -0.57
CPSF4-203ENST00000430038 NHLRC2Q8NBF2 726 aa11.47□□□□□ -0.57
CPSF4-203ENST00000430038 TRAV9-2A0A087WT02 112 aa11.46□□□□□ -0.57
CPSF4-203ENST00000430038 LRCOL1A6NCL2 159 aa11.46□□□□□ -0.57
CPSF4-203ENST00000430038 FBLL1A6NHQ2 334 aaKnown RBP11.46□□□□□ -0.57
CPSF4-203ENST00000430038 PTTG1O95997 202 aa11.46□□□□□ -0.57
CPSF4-203ENST00000430038 PFN1P07737 140 aaKnown RBP11.46□□□□□ -0.57
CPSF4-203ENST00000430038 EVI2AP22794 236 aa11.46□□□□□ -0.57
CPSF4-203ENST00000430038 Q8N3U1 123 aa11.46□□□□□ -0.57
CPSF4-203ENST00000430038 TNFSF18Q9UNG2 199 aa11.46□□□□□ -0.57
CPSF4-203ENST00000430038 IGHV3-38A0A0C4DH36 116 aa11.45□□□□□ -0.58
CPSF4-203ENST00000430038 SERTM2A0A1B0GWG4 89 aa11.45□□□□□ -0.58
CPSF4-203ENST00000430038 TAAR5O14804 337 aa11.45□□□□□ -0.58
CPSF4-203ENST00000430038 CXorf1O96002 111 aa11.45□□□□□ -0.58
CPSF4-203ENST00000430038 TIRAPP58753 221 aa11.45□□□□□ -0.58
CPSF4-203ENST00000430038 JPT2Q9H910 190 aa11.45□□□□□ -0.58
CPSF4-203ENST00000430038 CRIP1P50238 77 aa11.44□□□□□ -0.58
CPSF4-203ENST00000430038 SMUG1Q53HV7 270 aa11.44□□□□□ -0.58
CPSF4-203ENST00000430038 CDPF1Q6NVV7 123 aa11.44□□□□□ -0.58
CPSF4-203ENST00000430038 CYB561D1Q8N8Q1 229 aa11.44□□□□□ -0.58
CPSF4-203ENST00000430038 NDFIP1Q9BT67 221 aa11.44□□□□□ -0.58
CPSF4-203ENST00000430038 ACTR3CQ9C0K3 210 aaPredicted RBP11.44□□□□□ -0.58
CPSF4-203ENST00000430038 BATF3Q9NR55 127 aa11.44□□□□□ -0.58
CPSF4-203ENST00000430038 TRBV6-4A0A1B0GX49 114 aa11.43□□□□□ -0.58
CPSF4-203ENST00000430038 K7EP13 123 aa11.43□□□□□ -0.58
CPSF4-203ENST00000430038 MBP02144 154 aa11.43□□□□□ -0.58
CPSF4-203ENST00000430038 GIPP09681 153 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms