RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 SPTBN1Q01082 2364 aaKnown RBP8.75□□□□□ -1.01
LINC01238-203ENST00000429456 H3BVH4 76 aa8.75□□□□□ -1.01
LINC01238-203ENST00000429456 ZC2HC1BQ5TFG8 222 aa8.75□□□□□ -1.01
LINC01238-203ENST00000429456 RAB37Q96AX2 223 aa8.75□□□□□ -1.01
LINC01238-203ENST00000429456 MRAP2Q96G30 205 aa8.75□□□□□ -1.01
LINC01238-203ENST00000429456 COL6A6A6NMZ7 2263 aa8.75□□□□□ -1.01
LINC01238-203ENST00000429456 A0A1W2PPM0 123 aa8.75□□□□□ -1.01
LINC01238-203ENST00000429456 IGF1P05019 195 aa8.75□□□□□ -1.01
LINC01238-203ENST00000429456 ARL3P36405 182 aa8.75□□□□□ -1.01
LINC01238-203ENST00000429456 SRSF1Q07955 248 aaKnown RBP eCLIP8.75□□□□□ -1.01
LINC01238-203ENST00000429456 GPHB5Q86YW7 130 aa8.75□□□□□ -1.01
LINC01238-203ENST00000429456 CHAC1Q9BUX1 264 aa8.75□□□□□ -1.01
LINC01238-203ENST00000429456 MRPL35Q9NZE8 188 aaKnown RBP8.75□□□□□ -1.01
LINC01238-203ENST00000429456 LINC00527Q9UJ94 153 aa8.75□□□□□ -1.01
LINC01238-203ENST00000429456 ATRXP46100 2492 aa8.75□□□□□ -1.01
LINC01238-203ENST00000429456 TRBV25-1A0A075B6N4 114 aa8.74□□□□□ -1.01
LINC01238-203ENST00000429456 A0A087WX48 190 aa8.74□□□□□ -1.01
LINC01238-203ENST00000429456 TRAV40A0A0B4J280 105 aa8.74□□□□□ -1.01
LINC01238-203ENST00000429456 K7ERU9 68 aa8.74□□□□□ -1.01
LINC01238-203ENST00000429456 SMIM13P0DJ93 91 aa8.74□□□□□ -1.01
LINC01238-203ENST00000429456 FXYD2P54710 66 aa8.74□□□□□ -1.01
LINC01238-203ENST00000429456 TM4SF20Q53R12 229 aa8.74□□□□□ -1.01
LINC01238-203ENST00000429456 ZFAND2AQ8N6M9 145 aa8.74□□□□□ -1.01
LINC01238-203ENST00000429456 LINC00477Q96M19 166 aa8.74□□□□□ -1.01
LINC01238-203ENST00000429456 TMEM160Q9NX00 188 aa8.74□□□□□ -1.01
LINC01238-203ENST00000429456 HIVEP3Q5T1R4 2406 aa8.73□□□□□ -1.01
LINC01238-203ENST00000429456 SOCS3O14543 225 aa8.73□□□□□ -1.01
LINC01238-203ENST00000429456 GCSHP23434 173 aa8.73□□□□□ -1.01
LINC01238-203ENST00000429456 IGF2RP11717 2491 aa8.73□□□□□ -1.01
LINC01238-203ENST00000429456 IGHV3OR16-10A0A075B7F0 116 aa8.73□□□□□ -1.01
LINC01238-203ENST00000429456 NDUFA4O00483 81 aa8.73□□□□□ -1.01
LINC01238-203ENST00000429456 OVOL1O14753 267 aa8.73□□□□□ -1.01
LINC01238-203ENST00000429456 UNQ9165/PRO28630Q6UXU0 137 aa8.73□□□□□ -1.01
LINC01238-203ENST00000429456 SMIM2Q9BVW6 85 aa8.73□□□□□ -1.01
LINC01238-203ENST00000429456 IGHV1-69DA0A0B4J2H0 117 aa8.72□□□□□ -1.01
LINC01238-203ENST00000429456 TRBV12-3P01733 135 aa8.72□□□□□ -1.01
LINC01238-203ENST00000429456 IGHV1-69P01742 117 aa8.72□□□□□ -1.01
LINC01238-203ENST00000429456 OR5A1Q8NGJ0 315 aa8.72□□□□□ -1.01
LINC01238-203ENST00000429456 TM2D2Q9BX73 214 aa8.72□□□□□ -1.01
LINC01238-203ENST00000429456 SPCS1Q9Y6A9 102 aa8.72□□□□□ -1.01
LINC01238-203ENST00000429456 SVEP1Q4LDE5 3571 aa8.72□□□□□ -1.01
LINC01238-203ENST00000429456 TRAV21A0A0B4J279 112 aa8.72□□□□□ -1.01
LINC01238-203ENST00000429456 OR10J6PQ8NGY7 276 aa8.72□□□□□ -1.01
LINC01238-203ENST00000429456 MEGF9Q9H1U4 602 aa8.72□□□□□ -1.01
LINC01238-203ENST00000429456 TRAV12-1A0A0B4J245 112 aa8.71□□□□□ -1.01
LINC01238-203ENST00000429456 SAP30O75446 220 aa8.71□□□□□ -1.01
LINC01238-203ENST00000429456 IGHV4-39P01824 125 aa8.71□□□□□ -1.01
LINC01238-203ENST00000429456 FABP2P12104 132 aa8.71□□□□□ -1.01
LINC01238-203ENST00000429456 SAMD5Q5TGI4 173 aa8.71□□□□□ -1.01
LINC01238-203ENST00000429456 CEND1Q8N111 149 aa8.71□□□□□ -1.01
LINC01238-203ENST00000429456 MAPKAPK5-AS1Q8N8E1 139 aa8.71□□□□□ -1.01
LINC01238-203ENST00000429456 PHLDA1Q8WV24 401 aaPredicted RBP8.71□□□□□ -1.01
LINC01238-203ENST00000429456 RASL10AQ92737 203 aa8.71□□□□□ -1.01
LINC01238-203ENST00000429456 FAM19A4Q96LR4 140 aa8.71□□□□□ -1.01
LINC01238-203ENST00000429456 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.71□□□□□ -1.02
LINC01238-203ENST00000429456 C19orf84I3L1E1 186 aa8.71□□□□□ -1.02
LINC01238-203ENST00000429456 BRI3O95415 125 aa8.71□□□□□ -1.02
LINC01238-203ENST00000429456 MED14OSP0DP75 135 aa8.71□□□□□ -1.02
LINC01238-203ENST00000429456 PLNP26678 52 aa8.71□□□□□ -1.02
LINC01238-203ENST00000429456 ORMDL2Q53FV1 153 aa8.71□□□□□ -1.02
LINC01238-203ENST00000429456 C20orf78Q9BR46 151 aa8.71□□□□□ -1.02
LINC01238-203ENST00000429456 DPH3P1Q9H4G8 78 aa8.71□□□□□ -1.02
LINC01238-203ENST00000429456 SELENOKQ9Y6D0 94 aa8.71□□□□□ -1.02
LINC01238-203ENST00000429456 ABCA2Q9BZC7 2435 aa8.7□□□□□ -1.02
LINC01238-203ENST00000429456 M0R381 172 aa8.7□□□□□ -1.02
LINC01238-203ENST00000429456 ASIPP42127 132 aa8.7□□□□□ -1.02
LINC01238-203ENST00000429456 SUMO2P61956 95 aaKnown RBP8.7□□□□□ -1.02
LINC01238-203ENST00000429456 ANXA2RQ3ZCQ2 193 aa8.7□□□□□ -1.02
LINC01238-203ENST00000429456 BRD3OSQ6XYD6 125 aa8.7□□□□□ -1.02
LINC01238-203ENST00000429456 NEGR1Q7Z3B1 354 aa8.7□□□□□ -1.02
LINC01238-203ENST00000429456 TOMM6Q96B49 74 aa8.7□□□□□ -1.02
LINC01238-203ENST00000429456 F8VRH5 84 aa8.69□□□□□ -1.02
LINC01238-203ENST00000429456 H3BUA1 57 aa8.69□□□□□ -1.02
LINC01238-203ENST00000429456 H7C1H1 209 aa8.69□□□□□ -1.02
LINC01238-203ENST00000429456 SPRY2O43597 315 aa8.69□□□□□ -1.02
LINC01238-203ENST00000429456 SLC25A16P16260 332 aa8.69□□□□□ -1.02
LINC01238-203ENST00000429456 DEFB1P60022 68 aa8.69□□□□□ -1.02
LINC01238-203ENST00000429456 TAL2Q16559 108 aa8.69□□□□□ -1.02
LINC01238-203ENST00000429456 APRG1Q8IVJ8 170 aa8.69□□□□□ -1.02
LINC01238-203ENST00000429456 USMG5Q96IX5 58 aa8.69□□□□□ -1.02
LINC01238-203ENST00000429456 RNF223E7ERA6 249 aa8.69□□□□□ -1.02
LINC01238-203ENST00000429456 K7EMI3 77 aa8.69□□□□□ -1.02
LINC01238-203ENST00000429456 K7ERJ3 54 aa8.69□□□□□ -1.02
LINC01238-203ENST00000429456 S100A4P26447 101 aaKnown RBP8.69□□□□□ -1.02
LINC01238-203ENST00000429456 LY6DQ14210 128 aa8.69□□□□□ -1.02
LINC01238-203ENST00000429456 RPL39LQ96EH5 51 aaKnown RBP8.69□□□□□ -1.02
LINC01238-203ENST00000429456 PHLDA3Q9Y5J5 127 aa8.69□□□□□ -1.02
LINC01238-203ENST00000429456 AKAP6Q13023 2319 aa8.69□□□□□ -1.02
LINC01238-203ENST00000429456 IGHG2P01859 326 aa8.68□□□□□ -1.02
LINC01238-203ENST00000429456 C14orf178Q8N769 122 aaPredicted RBP8.68□□□□□ -1.02
LINC01238-203ENST00000429456 NEXN-AS1Q8NBZ9 246 aa8.68□□□□□ -1.02
LINC01238-203ENST00000429456 SCGB3A1Q96QR1 104 aa8.68□□□□□ -1.02
LINC01238-203ENST00000429456 SPXQ9BT56 116 aa8.68□□□□□ -1.02
LINC01238-203ENST00000429456 TRBV7-9A0A0J9YWB2 115 aa8.68□□□□□ -1.02
LINC01238-203ENST00000429456 G3V4G9 280 aa8.68□□□□□ -1.02
LINC01238-203ENST00000429456 IGHV3-11P01762 117 aa8.68□□□□□ -1.02
LINC01238-203ENST00000429456 RNASE4P34096 147 aaKnown RBP8.68□□□□□ -1.02
LINC01238-203ENST00000429456 NHP2Q9NX24 153 aaKnown RBP8.68□□□□□ -1.02
LINC01238-203ENST00000429456 IGHV4-61A0A0C4DH41 118 aa8.67□□□□□ -1.02
LINC01238-203ENST00000429456 A6NDX4 124 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms