RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 C16orf54Q6UWD8 224 aa9.62□□□□□ -0.87
CDH3-202ENST00000429102 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.61□□□□□ -0.87
CDH3-202ENST00000429102 AZU1P20160 251 aa9.61□□□□□ -0.87
CDH3-202ENST00000429102 SAA4P35542 130 aa9.61□□□□□ -0.87
CDH3-202ENST00000429102 IGHV3-64A0A075B6Q5 118 aa9.61□□□□□ -0.87
CDH3-202ENST00000429102 TRBV12-3P01733 135 aa9.61□□□□□ -0.87
CDH3-202ENST00000429102 RNASE4P34096 147 aaKnown RBP9.61□□□□□ -0.87
CDH3-202ENST00000429102 PDE6HQ13956 83 aa9.61□□□□□ -0.87
CDH3-202ENST00000429102 OR4X2Q8NGF9 303 aa9.61□□□□□ -0.87
CDH3-202ENST00000429102 OR9G4Q8NGQ1 327 aa9.61□□□□□ -0.87
CDH3-202ENST00000429102 CCDC168Q8NDH2 2452 aa9.61□□□□□ -0.87
CDH3-202ENST00000429102 SCGB2A1O75556 95 aa9.61□□□□□ -0.87
CDH3-202ENST00000429102 ATP5G2Q06055 141 aa9.61□□□□□ -0.87
CDH3-202ENST00000429102 CD300EQ496F6 205 aaPredicted RBP9.61□□□□□ -0.87
CDH3-202ENST00000429102 FAM74A4Q5TZK3 123 aa9.61□□□□□ -0.87
CDH3-202ENST00000429102 CLEC2AQ6UVW9 174 aa9.61□□□□□ -0.87
CDH3-202ENST00000429102 BUB3O43684 328 aa9.6□□□□□ -0.87
CDH3-202ENST00000429102 TCF15Q12870 199 aa9.6□□□□□ -0.87
CDH3-202ENST00000429102 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.6□□□□□ -0.87
CDH3-202ENST00000429102 C8orf86Q6ZUL3 223 aa9.6□□□□□ -0.87
CDH3-202ENST00000429102 Q8N9W7 124 aa9.6□□□□□ -0.87
CDH3-202ENST00000429102 SCGB3A1Q96QR1 104 aa9.6□□□□□ -0.87
CDH3-202ENST00000429102 METTL26Q96S19 204 aa9.6□□□□□ -0.87
CDH3-202ENST00000429102 GNRH2O43555 120 aa9.6□□□□□ -0.87
CDH3-202ENST00000429102 PPBPP02775 128 aa9.6□□□□□ -0.87
CDH3-202ENST00000429102 IGLC6P0CF74 106 aa9.6□□□□□ -0.87
CDH3-202ENST00000429102 PSMB2P49721 201 aa9.6□□□□□ -0.87
CDH3-202ENST00000429102 CCDC144NLQ6NUI1 221 aa9.6□□□□□ -0.87
CDH3-202ENST00000429102 KLHL30-AS1Q8NEE0 82 aa9.6□□□□□ -0.87
CDH3-202ENST00000429102 NPFFR1Q9GZQ6 430 aa9.6□□□□□ -0.87
CDH3-202ENST00000429102 MRPL16Q9NX20 251 aaKnown RBP9.6□□□□□ -0.87
CDH3-202ENST00000429102 HHLA3Q9XRX5 114 aa9.6□□□□□ -0.87
CDH3-202ENST00000429102 RPS20P60866 119 aaKnown RBP9.59□□□□□ -0.87
CDH3-202ENST00000429102 PRR9Q5T870 116 aa9.59□□□□□ -0.87
CDH3-202ENST00000429102 MSRB2Q9Y3D2 182 aa9.59□□□□□ -0.87
CDH3-202ENST00000429102 PHLDA3Q9Y5J5 127 aa9.59□□□□□ -0.87
CDH3-202ENST00000429102 TTC9CQ8N5M4 171 aa9.59□□□□□ -0.87
CDH3-202ENST00000429102 BPESC1Q9GZL8 116 aa9.59□□□□□ -0.87
CDH3-202ENST00000429102 ITPR1Q14643 2758 aa9.59□□□□□ -0.87
CDH3-202ENST00000429102 A0A1W2PPR1 153 aa9.58□□□□□ -0.88
CDH3-202ENST00000429102 LAGE3Q14657 143 aa9.58□□□□□ -0.88
CDH3-202ENST00000429102 JPT2Q9H910 190 aa9.58□□□□□ -0.88
CDH3-202ENST00000429102 NXT2Q9NPJ8 142 aaKnown RBP9.58□□□□□ -0.88
CDH3-202ENST00000429102 BEX4Q9NWD9 120 aaPredicted RBP9.58□□□□□ -0.88
CDH3-202ENST00000429102 RAXQ9Y2V3 346 aa9.58□□□□□ -0.88
CDH3-202ENST00000429102 ABCA12Q86UK0 2595 aa9.58□□□□□ -0.88
CDH3-202ENST00000429102 FLNCQ14315 2725 aa9.58□□□□□ -0.88
CDH3-202ENST00000429102 OR11H12B2RN74 326 aa9.58□□□□□ -0.88
CDH3-202ENST00000429102 J3QR89 54 aa9.58□□□□□ -0.88
CDH3-202ENST00000429102 OR11H1Q8NG94 326 aa9.58□□□□□ -0.88
CDH3-202ENST00000429102 OR11H6Q8NGC7 330 aa9.58□□□□□ -0.88
CDH3-202ENST00000429102 OR11H2Q8NH07 326 aa9.58□□□□□ -0.88
CDH3-202ENST00000429102 A0A087WWL8 130 aa9.58□□□□□ -0.88
CDH3-202ENST00000429102 UNQ9165/PRO28630Q6UXU0 137 aa9.58□□□□□ -0.88
CDH3-202ENST00000429102 ZNF575Q86XF7 245 aa9.58□□□□□ -0.88
CDH3-202ENST00000429102 RNF5Q99942 180 aa9.58□□□□□ -0.88
CDH3-202ENST00000429102 INSL3P51460 131 aa9.57□□□□□ -0.88
CDH3-202ENST00000429102 LY6DQ14210 128 aa9.57□□□□□ -0.88
CDH3-202ENST00000429102 NPBQ8NG41 125 aa9.57□□□□□ -0.88
CDH3-202ENST00000429102 U3KQK5 164 aa9.57□□□□□ -0.88
CDH3-202ENST00000429102 PF4V1P10720 104 aa9.57□□□□□ -0.88
CDH3-202ENST00000429102 UFSP1Q6NVU6 142 aa9.57□□□□□ -0.88
CDH3-202ENST00000429102 LINC00477Q96M19 166 aa9.57□□□□□ -0.88
CDH3-202ENST00000429102 CCDC140Q96MF4 163 aa9.57□□□□□ -0.88
CDH3-202ENST00000429102 SIGMAR1Q99720 223 aa9.57□□□□□ -0.88
CDH3-202ENST00000429102 SRSF8Q9BRL6 282 aaKnown RBP9.57□□□□□ -0.88
CDH3-202ENST00000429102 G3V4G9 280 aa9.56□□□□□ -0.88
CDH3-202ENST00000429102 EDN2P20800 178 aa9.56□□□□□ -0.88
CDH3-202ENST00000429102 Q1RN00 199 aa9.56□□□□□ -0.88
CDH3-202ENST00000429102 PTH2Q96A98 100 aa9.56□□□□□ -0.88
CDH3-202ENST00000429102 C20orf173Q96LM9 149 aa9.56□□□□□ -0.88
CDH3-202ENST00000429102 HLA-DRB4P13762 266 aa9.55□□□□□ -0.88
CDH3-202ENST00000429102 CEND1Q8N111 149 aa9.55□□□□□ -0.88
CDH3-202ENST00000429102 Q8N8P6 123 aa9.55□□□□□ -0.88
CDH3-202ENST00000429102 OR5A1Q8NGJ0 315 aa9.55□□□□□ -0.88
CDH3-202ENST00000429102 DPF1Q92782 380 aa9.55□□□□□ -0.88
CDH3-202ENST00000429102 PGPEP1Q9NXJ5 209 aa9.55□□□□□ -0.88
CDH3-202ENST00000429102 ZNF256Q9Y2P7 627 aaPredicted RBP9.55□□□□□ -0.88
CDH3-202ENST00000429102 HLA-DRB4X5D2U9 266 aa9.55□□□□□ -0.88
CDH3-202ENST00000429102 TMEM170BQ5T4T1 132 aa9.55□□□□□ -0.88
CDH3-202ENST00000429102 LY6G5BQ8NDX9 201 aa9.55□□□□□ -0.88
CDH3-202ENST00000429102 LRRK2Q5S007 2527 aa9.55□□□□□ -0.88
CDH3-202ENST00000429102 TRAV8-2A0A0B4J237 113 aa9.55□□□□□ -0.88
CDH3-202ENST00000429102 SRSF1Q07955 248 aaKnown RBP eCLIP9.55□□□□□ -0.88
CDH3-202ENST00000429102 GAGE13Q4V321 117 aa9.55□□□□□ -0.88
CDH3-202ENST00000429102 CHTOPQ9Y3Y2 248 aaKnown RBP9.55□□□□□ -0.88
CDH3-202ENST00000429102 ANXA2RQ3ZCQ2 193 aa9.54□□□□□ -0.88
CDH3-202ENST00000429102 TRBV6-1A0A0K0K1D8 114 aa9.54□□□□□ -0.88
CDH3-202ENST00000429102 ZNF815PA8K554 130 aa9.54□□□□□ -0.88
CDH3-202ENST00000429102 ADORA2A-AS1P86434 159 aa9.54□□□□□ -0.88
CDH3-202ENST00000429102 PAX8Q06710 450 aa9.54□□□□□ -0.88
CDH3-202ENST00000429102 C12orf74Q32Q52 190 aa9.54□□□□□ -0.88
CDH3-202ENST00000429102 EEF1AKMT3Q96AZ1 226 aa9.54□□□□□ -0.88
CDH3-202ENST00000429102 CLPSL1A2RUU4 121 aa9.54□□□□□ -0.88
CDH3-202ENST00000429102 ATP5LO75964 103 aa9.54□□□□□ -0.88
CDH3-202ENST00000429102 SLC25A16P16260 332 aa9.54□□□□□ -0.88
CDH3-202ENST00000429102 ZFAND3Q9H8U3 227 aa9.54□□□□□ -0.88
CDH3-202ENST00000429102 JMJD1CQ15652 2540 aa9.53□□□□□ -0.88
CDH3-202ENST00000429102 ODF3BA8MYP8 253 aa9.53□□□□□ -0.88
CDH3-202ENST00000429102 IGLL5B9A064 214 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms