RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 ZMAT5Q9UDW3 170 aaKnown RBP9.35□□□□□ -0.91
HMGB3P4-201ENST00000428776 CRXO43186 299 aaPredicted RBP9.34□□□□□ -0.91
HMGB3P4-201ENST00000428776 FXYD7P58549 80 aa9.34□□□□□ -0.91
HMGB3P4-201ENST00000428776 TDRG1Q3Y452 100 aa9.34□□□□□ -0.91
HMGB3P4-201ENST00000428776 MORN3Q6PF18 240 aaPredicted RBP9.34□□□□□ -0.91
HMGB3P4-201ENST00000428776 FAM159AQ6UWV7 190 aa9.34□□□□□ -0.91
HMGB3P4-201ENST00000428776 PGLYRP4Q96LB8 373 aa9.34□□□□□ -0.91
HMGB3P4-201ENST00000428776 WFDC10AQ9H1F0 79 aa9.34□□□□□ -0.91
HMGB3P4-201ENST00000428776 NAGKQ9UJ70 344 aa9.34□□□□□ -0.91
HMGB3P4-201ENST00000428776 GRIFINA4D1Z8 144 aa9.33□□□□□ -0.92
HMGB3P4-201ENST00000428776 F2Z2F3 143 aa9.33□□□□□ -0.92
HMGB3P4-201ENST00000428776 IGLC6P0CF74 106 aa9.33□□□□□ -0.92
HMGB3P4-201ENST00000428776 ANXA2RQ3ZCQ2 193 aa9.33□□□□□ -0.92
HMGB3P4-201ENST00000428776 COX19Q49B96 90 aa9.33□□□□□ -0.92
HMGB3P4-201ENST00000428776 OXLD1Q5BKU9 147 aa9.33□□□□□ -0.92
HMGB3P4-201ENST00000428776 DNLZQ5SXM8 178 aa9.33□□□□□ -0.92
HMGB3P4-201ENST00000428776 RASL11AQ6T310 242 aa9.33□□□□□ -0.92
HMGB3P4-201ENST00000428776 ATP5L2Q7Z4Y8 100 aa9.33□□□□□ -0.92
HMGB3P4-201ENST00000428776 Q8N1Y9 231 aa9.33□□□□□ -0.92
HMGB3P4-201ENST00000428776 DEFB125Q8N687 156 aa9.33□□□□□ -0.92
HMGB3P4-201ENST00000428776 FER1L6-AS1Q8NA97 138 aa9.33□□□□□ -0.92
HMGB3P4-201ENST00000428776 BORCS7Q96B45 105 aa9.33□□□□□ -0.92
HMGB3P4-201ENST00000428776 SRD5A3Q9H8P0 318 aa9.33□□□□□ -0.92
HMGB3P4-201ENST00000428776 IGHV1OR15-1A0A075B7D0 117 aa9.32□□□□□ -0.92
HMGB3P4-201ENST00000428776 A0A1B0GUT8 65 aa9.32□□□□□ -0.92
HMGB3P4-201ENST00000428776 SPINK4O60575 86 aa9.32□□□□□ -0.92
HMGB3P4-201ENST00000428776 INSP01308 110 aa9.32□□□□□ -0.92
HMGB3P4-201ENST00000428776 CTRLP40313 264 aa9.32□□□□□ -0.92
HMGB3P4-201ENST00000428776 RPS10P46783 165 aaKnown RBP9.32□□□□□ -0.92
HMGB3P4-201ENST00000428776 RIPPLY3P57055 190 aa9.32□□□□□ -0.92
HMGB3P4-201ENST00000428776 EGFEM1PQ0D2K5 195 aa9.32□□□□□ -0.92
HMGB3P4-201ENST00000428776 MUC21Q5SSG8 566 aa9.32□□□□□ -0.92
HMGB3P4-201ENST00000428776 LYZL1Q6UWQ5 148 aa9.32□□□□□ -0.92
HMGB3P4-201ENST00000428776 C1QTNF4Q9BXJ3 329 aa9.32□□□□□ -0.92
HMGB3P4-201ENST00000428776 A0A1B0GW15 77 aa9.31□□□□□ -0.92
HMGB3P4-201ENST00000428776 OR5AL1P0C617 328 aa9.31□□□□□ -0.92
HMGB3P4-201ENST00000428776 ASIPP42127 132 aa9.31□□□□□ -0.92
HMGB3P4-201ENST00000428776 MRPL54Q6P161 138 aaKnown RBP9.31□□□□□ -0.92
HMGB3P4-201ENST00000428776 TMEM256Q8N2U0 113 aa9.31□□□□□ -0.92
HMGB3P4-201ENST00000428776 TPPP3Q9BW30 176 aa9.31□□□□□ -0.92
HMGB3P4-201ENST00000428776 SSBP4Q9BWG4 385 aaPredicted RBP9.31□□□□□ -0.92
HMGB3P4-201ENST00000428776 XCL2Q9UBD3 114 aa9.31□□□□□ -0.92
HMGB3P4-201ENST00000428776 A0A1B0GXF2 115 aa9.3□□□□□ -0.92
HMGB3P4-201ENST00000428776 GNRH2O43555 120 aa9.3□□□□□ -0.92
HMGB3P4-201ENST00000428776 RBMY1A1P0DJD3 496 aaKnown RBP9.3□□□□□ -0.92
HMGB3P4-201ENST00000428776 RBMY1CP0DJD4 496 aa9.3□□□□□ -0.92
HMGB3P4-201ENST00000428776 MED14OSP0DP75 135 aa9.3□□□□□ -0.92
HMGB3P4-201ENST00000428776 RPL35AP18077 110 aaKnown RBP9.3□□□□□ -0.92
HMGB3P4-201ENST00000428776 RIGQ13278 110 aa9.3□□□□□ -0.92
HMGB3P4-201ENST00000428776 RBMY1FQ15415 496 aaKnown RBP9.3□□□□□ -0.92
HMGB3P4-201ENST00000428776 WDR73Q6P4I2 378 aa9.3□□□□□ -0.92
HMGB3P4-201ENST00000428776 LINC00467Q9BRT7 94 aa9.3□□□□□ -0.92
HMGB3P4-201ENST00000428776 GNB1LQ9BYB4 327 aa9.3□□□□□ -0.92
HMGB3P4-201ENST00000428776 MUC4Q99102 2169 aa9.29□□□□□ -0.92
HMGB3P4-201ENST00000428776 SNAI2O43623 268 aa9.29□□□□□ -0.92
HMGB3P4-201ENST00000428776 MT-ND6P03923 174 aa9.29□□□□□ -0.92
HMGB3P4-201ENST00000428776 S100A8P05109 93 aa9.29□□□□□ -0.92
HMGB3P4-201ENST00000428776 ARMS2P0C7Q2 107 aa9.29□□□□□ -0.92
HMGB3P4-201ENST00000428776 S100A4P26447 101 aaKnown RBP9.29□□□□□ -0.92
HMGB3P4-201ENST00000428776 HBBP68871 147 aa9.29□□□□□ -0.92
HMGB3P4-201ENST00000428776 CNFNQ9BYD5 112 aa9.29□□□□□ -0.92
HMGB3P4-201ENST00000428776 TRGV11A0A075B6L2 103 aa9.28□□□□□ -0.92
HMGB3P4-201ENST00000428776 H3BVH4 76 aa9.28□□□□□ -0.92
HMGB3P4-201ENST00000428776 GIG44P09565 113 aaPredicted RBP9.28□□□□□ -0.92
HMGB3P4-201ENST00000428776 FRMD6-AS1P0C7T7 363 aa9.28□□□□□ -0.92
HMGB3P4-201ENST00000428776 KRTAP10-11P60412 298 aa9.28□□□□□ -0.92
HMGB3P4-201ENST00000428776 CACNG7P62955 275 aa9.28□□□□□ -0.92
HMGB3P4-201ENST00000428776 LINC01587Q99440 93 aa9.28□□□□□ -0.92
HMGB3P4-201ENST00000428776 CSTL1Q9H114 145 aa9.28□□□□□ -0.92
HMGB3P4-201ENST00000428776 TRAPPC1Q9Y5R8 145 aa9.28□□□□□ -0.92
HMGB3P4-201ENST00000428776 IGHV4-4A0A075B6R2 117 aa9.27□□□□□ -0.93
HMGB3P4-201ENST00000428776 LOC102724200A0A096LPH7 203 aaPredicted RBP9.27□□□□□ -0.93
HMGB3P4-201ENST00000428776 IGHV3-16A0A0C4DH30 117 aa9.27□□□□□ -0.93
HMGB3P4-201ENST00000428776 CBY3A6NI87 242 aa9.27□□□□□ -0.93
HMGB3P4-201ENST00000428776 C1orf196B1AJZ1 125 aa9.27□□□□□ -0.93
HMGB3P4-201ENST00000428776 SNURFLB1AK76 121 aa9.27□□□□□ -0.93
HMGB3P4-201ENST00000428776 HLA-DQA1P01909 254 aa9.27□□□□□ -0.93
HMGB3P4-201ENST00000428776 TRGC2P03986 189 aa9.27□□□□□ -0.93
HMGB3P4-201ENST00000428776 RNASE3P12724 160 aaKnown RBP9.27□□□□□ -0.93
HMGB3P4-201ENST00000428776 NTF3P20783 257 aa9.27□□□□□ -0.93
HMGB3P4-201ENST00000428776 CAMPP49913 170 aa9.27□□□□□ -0.93
HMGB3P4-201ENST00000428776 RAB4BP61018 213 aa9.27□□□□□ -0.93
HMGB3P4-201ENST00000428776 SAMD5Q5TGI4 173 aa9.27□□□□□ -0.93
HMGB3P4-201ENST00000428776 TMEM136Q6ZRR5 245 aa9.27□□□□□ -0.93
HMGB3P4-201ENST00000428776 C1orf158Q8N1D5 194 aa9.27□□□□□ -0.93
HMGB3P4-201ENST00000428776 TMEM208Q9BTX3 173 aa9.27□□□□□ -0.93
HMGB3P4-201ENST00000428776 SCRT2Q9NQ03 307 aa9.27□□□□□ -0.93
HMGB3P4-201ENST00000428776 TP53TG3Q9ULZ0 132 aa9.27□□□□□ -0.93
HMGB3P4-201ENST00000428776 GOLT1BQ9Y3E0 138 aa9.27□□□□□ -0.93
HMGB3P4-201ENST00000428776 KIR2DL5BA0A0G2JN68 375 aa9.26□□□□□ -0.93
HMGB3P4-201ENST00000428776 KIR2DL5BA0A0G2JPC4 375 aa9.26□□□□□ -0.93
HMGB3P4-201ENST00000428776 G3V4G9 280 aa9.26□□□□□ -0.93
HMGB3P4-201ENST00000428776 TWIST1Q15672 202 aa9.26□□□□□ -0.93
HMGB3P4-201ENST00000428776 KIR2DL5AQ8N109 375 aa9.26□□□□□ -0.93
HMGB3P4-201ENST00000428776 GATD1Q8NB37 220 aa9.26□□□□□ -0.93
HMGB3P4-201ENST00000428776 CSNK1G2-AS1Q8NCQ2 148 aa9.26□□□□□ -0.93
HMGB3P4-201ENST00000428776 KIR2DL5BQ8NHK3 375 aa9.26□□□□□ -0.93
HMGB3P4-201ENST00000428776 MRPL18Q9H0U6 180 aaKnown RBP9.26□□□□□ -0.93
HMGB3P4-201ENST00000428776 PHLDA3Q9Y5J5 127 aa9.26□□□□□ -0.93
HMGB3P4-201ENST00000428776 MUC21A0A0G2JKD1 596 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms