RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 LOC100131303A0A0U1RQF7 123 aa11.61□□□□□ -0.55
TRIM39-209ENST00000428728 C9JCJ5 164 aa11.61□□□□□ -0.55
TRIM39-209ENST00000428728 M0R2P5 195 aa11.61□□□□□ -0.55
TRIM39-209ENST00000428728 ORM1P02763 201 aa11.61□□□□□ -0.55
TRIM39-209ENST00000428728 OR4C5Q8NGB2 326 aa11.61□□□□□ -0.55
TRIM39-209ENST00000428728 OR10G9Q8NGN4 311 aa11.61□□□□□ -0.55
TRIM39-209ENST00000428728 OR10G7Q8NGN6 311 aa11.61□□□□□ -0.55
TRIM39-209ENST00000428728 SGK494Q96LW2 274 aa11.61□□□□□ -0.55
TRIM39-209ENST00000428728 TRAV9-2A0A087WT02 112 aa11.6□□□□□ -0.55
TRIM39-209ENST00000428728 CDC34P49427 236 aaPredicted RBP11.6□□□□□ -0.55
TRIM39-209ENST00000428728 NFE4Q86UQ8 179 aa11.6□□□□□ -0.55
TRIM39-209ENST00000428728 HSD17B11Q8NBQ5 300 aa11.6□□□□□ -0.55
TRIM39-209ENST00000428728 TXNDC17Q9BRA2 123 aa11.6□□□□□ -0.55
TRIM39-209ENST00000428728 SDF2L1Q9HCN8 221 aa11.6□□□□□ -0.55
TRIM39-209ENST00000428728 ALG5Q9Y673 324 aa11.6□□□□□ -0.55
TRIM39-209ENST00000428728 NHLRC2Q8NBF2 726 aa11.59□□□□□ -0.55
TRIM39-209ENST00000428728 NDFIP1Q9BT67 221 aa11.59□□□□□ -0.55
TRIM39-209ENST00000428728 MSRB1Q9NZV6 116 aa11.59□□□□□ -0.55
TRIM39-209ENST00000428728 APOBP04114 4563 aaKnown RBP11.58□□□□□ -0.56
TRIM39-209ENST00000428728 EVI2AP22794 236 aa11.58□□□□□ -0.56
TRIM39-209ENST00000428728 ASB13Q8WXK3 278 aa11.58□□□□□ -0.56
TRIM39-209ENST00000428728 A0A087WTM6 91 aa11.57□□□□□ -0.56
TRIM39-209ENST00000428728 ARL6IP6Q8N6S5 226 aa11.57□□□□□ -0.56
TRIM39-209ENST00000428728 KCNS1Q96KK3 526 aa11.57□□□□□ -0.56
TRIM39-209ENST00000428728 PGPEP1Q9NXJ5 209 aa11.57□□□□□ -0.56
TRIM39-209ENST00000428728 CRYGDP07320 174 aa11.56□□□□□ -0.56
TRIM39-209ENST00000428728 STAG3L2P0CL84 134 aa11.56□□□□□ -0.56
TRIM39-209ENST00000428728 STAG3L3P0CL85 134 aa11.56□□□□□ -0.56
TRIM39-209ENST00000428728 GATA1P15976 413 aaPredicted RBP11.56□□□□□ -0.56
TRIM39-209ENST00000428728 PPT1P50897 306 aa11.56□□□□□ -0.56
TRIM39-209ENST00000428728 CDPF1Q6NVV7 123 aa11.56□□□□□ -0.56
TRIM39-209ENST00000428728 C5orf17Q8NAS9 161 aa11.56□□□□□ -0.56
TRIM39-209ENST00000428728 RAB24Q969Q5 203 aa11.56□□□□□ -0.56
TRIM39-209ENST00000428728 FBLL1A6NHQ2 334 aaKnown RBP11.55□□□□□ -0.56
TRIM39-209ENST00000428728 TCRAP04437 139 aa11.55□□□□□ -0.56
TRIM39-209ENST00000428728 ATP6V0CP27449 155 aa11.55□□□□□ -0.56
TRIM39-209ENST00000428728 GCHFRP30047 84 aa11.55□□□□□ -0.56
TRIM39-209ENST00000428728 ZNF80P51504 273 aaPredicted RBP11.55□□□□□ -0.56
TRIM39-209ENST00000428728 ZNF876PQ49A33 203 aa11.55□□□□□ -0.56
TRIM39-209ENST00000428728 TMEM75Q8N9X5 138 aa11.55□□□□□ -0.56
TRIM39-209ENST00000428728 OR2G3Q8NGZ4 309 aa11.55□□□□□ -0.56
TRIM39-209ENST00000428728 C11orf21Q9P2W6 132 aa11.55□□□□□ -0.56
TRIM39-209ENST00000428728 DNAH5Q8TE73 4624 aa11.54□□□□□ -0.56
TRIM39-209ENST00000428728 SERTM2A0A1B0GWG4 89 aa11.54□□□□□ -0.56
TRIM39-209ENST00000428728 K7EQM0 130 aa11.54□□□□□ -0.56
TRIM39-209ENST00000428728 GCGP01275 180 aa11.54□□□□□ -0.56
TRIM39-209ENST00000428728 PSMG3Q9BT73 122 aaPredicted RBP11.54□□□□□ -0.56
TRIM39-209ENST00000428728 SH3BGRL3Q9H299 93 aa11.54□□□□□ -0.56
TRIM39-209ENST00000428728 IGHV3-73A0A0B4J1V6 119 aa11.53□□□□□ -0.56
TRIM39-209ENST00000428728 GGTLC3B5MD39 225 aa11.53□□□□□ -0.56
TRIM39-209ENST00000428728 K7EP13 123 aa11.53□□□□□ -0.56
TRIM39-209ENST00000428728 ZFP69Q49AA0 526 aa11.53□□□□□ -0.56
TRIM39-209ENST00000428728 SH2D6Q7Z4S9 175 aa11.53□□□□□ -0.56
TRIM39-209ENST00000428728 PRNTQ86SH4 94 aa11.53□□□□□ -0.56
TRIM39-209ENST00000428728 C10orf126Q8N4M7 172 aa11.53□□□□□ -0.56
TRIM39-209ENST00000428728 AQP10Q96PS8 301 aa11.53□□□□□ -0.56
TRIM39-209ENST00000428728 PSG8Q9UQ74 426 aa11.53□□□□□ -0.56
TRIM39-209ENST00000428728 IGHV3-38A0A0C4DH36 116 aa11.52□□□□□ -0.57
TRIM39-209ENST00000428728 SUMO1P63165 101 aaKnown RBP11.52□□□□□ -0.57
TRIM39-209ENST00000428728 FLI1Q01543 452 aaPredicted RBP11.52□□□□□ -0.57
TRIM39-209ENST00000428728 CFAP126Q5VTH2 177 aa11.52□□□□□ -0.57
TRIM39-209ENST00000428728 DPPA3Q6W0C5 159 aa11.52□□□□□ -0.57
TRIM39-209ENST00000428728 SLC25A29Q8N8R3 303 aa11.52□□□□□ -0.57
TRIM39-209ENST00000428728 MED28Q9H204 178 aa11.52□□□□□ -0.57
TRIM39-209ENST00000428728 EPM2AB3EWF7 344 aa11.51□□□□□ -0.57
TRIM39-209ENST00000428728 TAAR5O14804 337 aa11.51□□□□□ -0.57
TRIM39-209ENST00000428728 RS1O15537 224 aa11.51□□□□□ -0.57
TRIM39-209ENST00000428728 CXorf1O96002 111 aa11.51□□□□□ -0.57
TRIM39-209ENST00000428728 IGLV2-11P01706 119 aa11.51□□□□□ -0.57
TRIM39-209ENST00000428728 PFN1P07737 140 aaKnown RBP11.51□□□□□ -0.57
TRIM39-209ENST00000428728 KRTAP10-1P60331 282 aa11.51□□□□□ -0.57
TRIM39-209ENST00000428728 RHOHQ15669 191 aa11.51□□□□□ -0.57
TRIM39-209ENST00000428728 SMUG1Q53HV7 270 aa11.51□□□□□ -0.57
TRIM39-209ENST00000428728 ZNF506Q5JVG8 444 aa11.51□□□□□ -0.57
TRIM39-209ENST00000428728 CYB561D1Q8N8Q1 229 aa11.51□□□□□ -0.57
TRIM39-209ENST00000428728 SUN5Q8TC36 379 aa11.51□□□□□ -0.57
TRIM39-209ENST00000428728 C9orf85Q96MD7 179 aa11.51□□□□□ -0.57
TRIM39-209ENST00000428728 PRADC1Q9BSG0 188 aa11.51□□□□□ -0.57
TRIM39-209ENST00000428728 TMEM167BQ9NRX6 74 aa11.51□□□□□ -0.57
TRIM39-209ENST00000428728 EPDR1Q9UM22 224 aa11.51□□□□□ -0.57
TRIM39-209ENST00000428728 PSCAO43653 123 aa11.5□□□□□ -0.57
TRIM39-209ENST00000428728 MBP02144 154 aa11.5□□□□□ -0.57
TRIM39-209ENST00000428728 TIRAPP58753 221 aa11.5□□□□□ -0.57
TRIM39-209ENST00000428728 OR10J3Q5JRS4 329 aa11.5□□□□□ -0.57
TRIM39-209ENST00000428728 ACTR3CQ9C0K3 210 aaPredicted RBP11.5□□□□□ -0.57
TRIM39-209ENST00000428728 Q9HAA7 133 aa11.5□□□□□ -0.57
TRIM39-209ENST00000428728 TRAV8-6A0A0B4J262 113 aa11.49□□□□□ -0.57
TRIM39-209ENST00000428728 PGPEP1LA6NFU8 196 aa11.49□□□□□ -0.57
TRIM39-209ENST00000428728 PTTG1O95997 202 aa11.49□□□□□ -0.57
TRIM39-209ENST00000428728 XGP55808 180 aa11.49□□□□□ -0.57
TRIM39-209ENST00000428728 SERF2P84101 59 aa11.49□□□□□ -0.57
TRIM39-209ENST00000428728 Q5BKY6 102 aa11.49□□□□□ -0.57
TRIM39-209ENST00000428728 LINC01556Q5JQF7 62 aa11.49□□□□□ -0.57
TRIM39-209ENST00000428728 TRAV34A0A0B4J273 112 aa11.48□□□□□ -0.57
TRIM39-209ENST00000428728 IGHV3-30P01768 117 aa11.48□□□□□ -0.57
TRIM39-209ENST00000428728 IGHV3-33P01772 117 aa11.48□□□□□ -0.57
TRIM39-209ENST00000428728 IGHV3-30-3P0DP02 117 aa11.48□□□□□ -0.57
TRIM39-209ENST00000428728 IGHV3-30-5P0DP03 117 aa11.48□□□□□ -0.57
TRIM39-209ENST00000428728 RNASE3P12724 160 aaKnown RBP11.48□□□□□ -0.57
TRIM39-209ENST00000428728 RPL7L1Q6DKI1 246 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms