RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 A0A0G2JLM5 398 aa6.48□□□□□ -1.37
HDAC1-202ENST00000428704 HIGD1CA8MV81 97 aa6.48□□□□□ -1.37
HDAC1-202ENST00000428704 A8MWP6 167 aa6.48□□□□□ -1.37
HDAC1-202ENST00000428704 NDUFA4O00483 81 aa6.48□□□□□ -1.37
HDAC1-202ENST00000428704 IGHV3-23P01764 117 aa6.48□□□□□ -1.37
HDAC1-202ENST00000428704 MED14OSP0DP75 135 aa6.48□□□□□ -1.37
HDAC1-202ENST00000428704 FABP4P15090 132 aa6.48□□□□□ -1.37
HDAC1-202ENST00000428704 INSL3P51460 131 aa6.48□□□□□ -1.37
HDAC1-202ENST00000428704 PRNTQ86SH4 94 aa6.48□□□□□ -1.37
HDAC1-202ENST00000428704 GATD1Q8NB37 220 aa6.48□□□□□ -1.37
HDAC1-202ENST00000428704 METTL26Q96S19 204 aa6.48□□□□□ -1.37
HDAC1-202ENST00000428704 TP53TG3Q9ULZ0 132 aa6.48□□□□□ -1.37
HDAC1-202ENST00000428704 RPH3ALQ9UNE2 315 aa6.48□□□□□ -1.37
HDAC1-202ENST00000428704 PKHD1P08F94 4074 aa6.48□□□□□ -1.37
HDAC1-202ENST00000428704 VPS13DQ5THJ4 4388 aa6.48□□□□□ -1.37
HDAC1-202ENST00000428704 TRAV8-1A0A0A6YYK1 113 aa6.47□□□□□ -1.37
HDAC1-202ENST00000428704 M0R3E3 92 aa6.47□□□□□ -1.37
HDAC1-202ENST00000428704 SAP30O75446 220 aa6.47□□□□□ -1.37
HDAC1-202ENST00000428704 CA1P00915 261 aaPredicted RBP6.47□□□□□ -1.37
HDAC1-202ENST00000428704 CRIP1P50238 77 aa6.47□□□□□ -1.37
HDAC1-202ENST00000428704 KLF5Q13887 457 aaPredicted RBP6.47□□□□□ -1.37
HDAC1-202ENST00000428704 Q6AWC8 147 aa6.47□□□□□ -1.37
HDAC1-202ENST00000428704 PRR27Q6MZM9 219 aa6.47□□□□□ -1.37
HDAC1-202ENST00000428704 RBPMS2Q6ZRY4 209 aaKnown RBP6.47□□□□□ -1.37
HDAC1-202ENST00000428704 GTSF1Q8WW33 167 aa6.47□□□□□ -1.37
HDAC1-202ENST00000428704 SGK494Q96LW2 274 aa6.47□□□□□ -1.37
HDAC1-202ENST00000428704 A0A1B0GW15 77 aa6.46□□□□□ -1.38
HDAC1-202ENST00000428704 CHEK1O14757 476 aa6.46□□□□□ -1.38
HDAC1-202ENST00000428704 IGLV1-51P01701 117 aa6.46□□□□□ -1.38
HDAC1-202ENST00000428704 APCSP02743 223 aa6.46□□□□□ -1.38
HDAC1-202ENST00000428704 APOHP02749 345 aaPredicted RBP6.46□□□□□ -1.38
HDAC1-202ENST00000428704 TCL1AP56279 114 aa6.46□□□□□ -1.38
HDAC1-202ENST00000428704 HBBP68871 147 aa6.46□□□□□ -1.38
HDAC1-202ENST00000428704 PDZD11Q5EBL8 140 aa6.46□□□□□ -1.38
HDAC1-202ENST00000428704 LCN12Q6JVE5 192 aa6.46□□□□□ -1.38
HDAC1-202ENST00000428704 MRPL54Q6P161 138 aaKnown RBP6.46□□□□□ -1.38
HDAC1-202ENST00000428704 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.46□□□□□ -1.38
HDAC1-202ENST00000428704 TMEM256Q8N2U0 113 aa6.46□□□□□ -1.38
HDAC1-202ENST00000428704 ZC2HC1AQ96GY0 325 aa6.46□□□□□ -1.38
HDAC1-202ENST00000428704 GSN-AS1Q9NRJ2 163 aa6.46□□□□□ -1.38
HDAC1-202ENST00000428704 PEF1Q9UBV8 284 aaKnown RBP6.46□□□□□ -1.38
HDAC1-202ENST00000428704 SORL1Q92673 2214 aa6.46□□□□□ -1.38
HDAC1-202ENST00000428704 A0A1W2PS18 150 aa6.45□□□□□ -1.38
HDAC1-202ENST00000428704 K7EMT4 169 aa6.45□□□□□ -1.38
HDAC1-202ENST00000428704 NUPR1O60356 82 aa6.45□□□□□ -1.38
HDAC1-202ENST00000428704 CT45A10P0DMU9 189 aa6.45□□□□□ -1.38
HDAC1-202ENST00000428704 IGHV4-30-4P0DP06 118 aa6.45□□□□□ -1.38
HDAC1-202ENST00000428704 GZMBP10144 247 aa6.45□□□□□ -1.38
HDAC1-202ENST00000428704 BMI1P35226 326 aa6.45□□□□□ -1.38
HDAC1-202ENST00000428704 ARL3P36405 182 aa6.45□□□□□ -1.38
HDAC1-202ENST00000428704 SYNJ2BPP57105 145 aa6.45□□□□□ -1.38
HDAC1-202ENST00000428704 LINC00310P59036 64 aa6.45□□□□□ -1.38
HDAC1-202ENST00000428704 RPS20P60866 119 aaKnown RBP6.45□□□□□ -1.38
HDAC1-202ENST00000428704 FAM162BQ5T6X4 162 aa6.45□□□□□ -1.38
HDAC1-202ENST00000428704 GDF5OSQ5U4N7 250 aa6.45□□□□□ -1.38
HDAC1-202ENST00000428704 OR2D3Q8NGH3 330 aa6.45□□□□□ -1.38
HDAC1-202ENST00000428704 OR9G4Q8NGQ1 327 aa6.45□□□□□ -1.38
HDAC1-202ENST00000428704 GLMPQ8WWB7 406 aa6.45□□□□□ -1.38
HDAC1-202ENST00000428704 KRTAP4-5Q9BYR2 181 aa6.45□□□□□ -1.38
HDAC1-202ENST00000428704 GRIFINA4D1Z8 144 aa6.44□□□□□ -1.38
HDAC1-202ENST00000428704 SPINK4O60575 86 aa6.44□□□□□ -1.38
HDAC1-202ENST00000428704 CSN3P07498 182 aa6.44□□□□□ -1.38
HDAC1-202ENST00000428704 EDN2P20800 178 aa6.44□□□□□ -1.38
HDAC1-202ENST00000428704 RPL11P62913 178 aaKnown RBP6.44□□□□□ -1.38
HDAC1-202ENST00000428704 SLAQ13239 276 aa6.44□□□□□ -1.38
HDAC1-202ENST00000428704 RIGQ13278 110 aa6.44□□□□□ -1.38
HDAC1-202ENST00000428704 TCF24Q7RTU0 167 aa6.44□□□□□ -1.38
HDAC1-202ENST00000428704 ALKBH7Q9BT30 221 aaPredicted RBP6.44□□□□□ -1.38
HDAC1-202ENST00000428704 NDFIP1Q9BT67 221 aa6.44□□□□□ -1.38
HDAC1-202ENST00000428704 LENEPQ9Y5L5 61 aa6.44□□□□□ -1.38
HDAC1-202ENST00000428704 TRAV8-2A0A0B4J237 113 aa6.43□□□□□ -1.38
HDAC1-202ENST00000428704 A0A1B0GUT8 65 aa6.43□□□□□ -1.38
HDAC1-202ENST00000428704 PCP4L1A6NKN8 68 aa6.43□□□□□ -1.38
HDAC1-202ENST00000428704 SERF1AO75920 110 aa6.43□□□□□ -1.38
HDAC1-202ENST00000428704 GPX1P07203 203 aa6.43□□□□□ -1.38
HDAC1-202ENST00000428704 SRIP30626 198 aa6.43□□□□□ -1.38
HDAC1-202ENST00000428704 RAB4BP61018 213 aa6.43□□□□□ -1.38
HDAC1-202ENST00000428704 ZNF493Q6ZR52 646 aa6.43□□□□□ -1.38
HDAC1-202ENST00000428704 C9orf47Q6ZRZ4 202 aa6.43□□□□□ -1.38
HDAC1-202ENST00000428704 BAGE3Q86Y29 109 aa6.43□□□□□ -1.38
HDAC1-202ENST00000428704 GPHB5Q86YW7 130 aa6.43□□□□□ -1.38
HDAC1-202ENST00000428704 Q8N1Y9 231 aa6.43□□□□□ -1.38
HDAC1-202ENST00000428704 C18orf32Q8TCD1 76 aa6.43□□□□□ -1.38
HDAC1-202ENST00000428704 SIGLEC8Q9NYZ4 499 aa6.43□□□□□ -1.38
HDAC1-202ENST00000428704 FAT2Q9NYQ8 4349 aa6.43□□□□□ -1.38
HDAC1-202ENST00000428704 IGKV2-40A0A087WW87 121 aaPredicted RBP6.42□□□□□ -1.38
HDAC1-202ENST00000428704 IGHV3-35A0A0C4DH35 117 aa6.42□□□□□ -1.38
HDAC1-202ENST00000428704 TMEM189A5PLL7 270 aa6.42□□□□□ -1.38
HDAC1-202ENST00000428704 FABP5P3A8MUU1 101 aa6.42□□□□□ -1.38
HDAC1-202ENST00000428704 IGKV2D-40P01614 121 aaPredicted RBP6.42□□□□□ -1.38
HDAC1-202ENST00000428704 ZNF124Q15973 351 aa6.42□□□□□ -1.38
HDAC1-202ENST00000428704 IQCJQ1A5X6 159 aa6.42□□□□□ -1.38
HDAC1-202ENST00000428704 KIAA1644Q3SXP7 199 aa6.42□□□□□ -1.38
HDAC1-202ENST00000428704 SAMD13Q5VXD3 122 aa6.42□□□□□ -1.38
HDAC1-202ENST00000428704 PGLYRP4Q96LB8 373 aa6.42□□□□□ -1.38
HDAC1-202ENST00000428704 C8orf49Q96NF6 230 aa6.42□□□□□ -1.38
HDAC1-202ENST00000428704 VGLL1Q99990 258 aa6.42□□□□□ -1.38
HDAC1-202ENST00000428704 X6R8D5 127 aa6.42□□□□□ -1.38
HDAC1-202ENST00000428704 HSPG2P98160 4391 aa6.42□□□□□ -1.38
HDAC1-202ENST00000428704 DNAH2Q9P225 4427 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms