RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 MARVELD1Q9BSK0 173 aa11.76□□□□□ -0.53
DDR1-235ENST00000428153 MBD2Q9UBB5 411 aa11.76□□□□□ -0.53
DDR1-235ENST00000428153 SRRM2Q9UQ35 2752 aaKnown RBP11.76□□□□□ -0.53
DDR1-235ENST00000428153 CRYGDP07320 174 aa11.75□□□□□ -0.53
DDR1-235ENST00000428153 RPL12P30050 165 aaKnown RBP11.75□□□□□ -0.53
DDR1-235ENST00000428153 FRZBQ92765 325 aa11.75□□□□□ -0.53
DDR1-235ENST00000428153 HYLS1Q96M11 299 aa11.75□□□□□ -0.53
DDR1-235ENST00000428153 IGHV3-38A0A0C4DH36 116 aa11.74□□□□□ -0.53
DDR1-235ENST00000428153 SERTM2A0A1B0GWG4 89 aa11.74□□□□□ -0.53
DDR1-235ENST00000428153 GATA1P15976 413 aaPredicted RBP11.74□□□□□ -0.53
DDR1-235ENST00000428153 KRTAP10-1P60331 282 aa11.74□□□□□ -0.53
DDR1-235ENST00000428153 ACOT6Q3I5F7 207 aaPredicted RBP11.74□□□□□ -0.53
DDR1-235ENST00000428153 SDF2L1Q9HCN8 221 aa11.74□□□□□ -0.53
DDR1-235ENST00000428153 NAGKQ9UJ70 344 aa11.74□□□□□ -0.53
DDR1-235ENST00000428153 GNRH2O43555 120 aa11.73□□□□□ -0.53
DDR1-235ENST00000428153 PFN1P07737 140 aaKnown RBP11.73□□□□□ -0.53
DDR1-235ENST00000428153 INAFM2P0DMQ5 153 aa11.73□□□□□ -0.53
DDR1-235ENST00000428153 GCSHP23434 173 aa11.73□□□□□ -0.53
DDR1-235ENST00000428153 LINC01556Q5JQF7 62 aa11.73□□□□□ -0.53
DDR1-235ENST00000428153 GOLT1AQ6ZVE7 132 aa11.73□□□□□ -0.53
DDR1-235ENST00000428153 NTN5Q8WTR8 489 aaPredicted RBP11.73□□□□□ -0.53
DDR1-235ENST00000428153 TREM1Q9NP99 234 aa11.73□□□□□ -0.53
DDR1-235ENST00000428153 MYCBP2O75592 4640 aa11.73□□□□□ -0.53
DDR1-235ENST00000428153 A0A1W2PPV4 95 aa11.72□□□□□ -0.53
DDR1-235ENST00000428153 TYMSP04818 313 aa11.72□□□□□ -0.53
DDR1-235ENST00000428153 Q5VSD8 79 aa11.72□□□□□ -0.53
DDR1-235ENST00000428153 TRBV6-4A0A1B0GX49 114 aa11.71□□□□□ -0.53
DDR1-235ENST00000428153 FBLL1A6NHQ2 334 aaKnown RBP11.71□□□□□ -0.53
DDR1-235ENST00000428153 FUSP35637 526 aaKnown RBP eCLIP11.71□□□□□ -0.53
DDR1-235ENST00000428153 IFITM3Q01628 133 aa11.71□□□□□ -0.53
DDR1-235ENST00000428153 ASB13Q8WXK3 278 aa11.71□□□□□ -0.53
DDR1-235ENST00000428153 TVP23CQ96ET8 276 aa11.71□□□□□ -0.53
DDR1-235ENST00000428153 NDFIP1Q9BT67 221 aa11.71□□□□□ -0.53
DDR1-235ENST00000428153 TMEM70Q9BUB7 260 aa11.71□□□□□ -0.53
DDR1-235ENST00000428153 IBA57-AS1B1ANH7 110 aa11.7□□□□□ -0.54
DDR1-235ENST00000428153 SSNA1O43805 119 aa11.7□□□□□ -0.54
DDR1-235ENST00000428153 PPT1P50897 306 aa11.7□□□□□ -0.54
DDR1-235ENST00000428153 RHOHQ15669 191 aa11.7□□□□□ -0.54
DDR1-235ENST00000428153 NHLRC2Q8NBF2 726 aa11.7□□□□□ -0.54
DDR1-235ENST00000428153 PTH2Q96A98 100 aa11.7□□□□□ -0.54
DDR1-235ENST00000428153 PRADC1Q9BSG0 188 aa11.7□□□□□ -0.54
DDR1-235ENST00000428153 SMIM3Q9BZL3 60 aa11.7□□□□□ -0.54
DDR1-235ENST00000428153 RPH3ALQ9UNE2 315 aa11.7□□□□□ -0.54
DDR1-235ENST00000428153 TRAV8-1A0A0A6YYK1 113 aa11.69□□□□□ -0.54
DDR1-235ENST00000428153 TRAV8-6A0A0B4J262 113 aa11.69□□□□□ -0.54
DDR1-235ENST00000428153 LOC100131303A0A0U1RQF7 123 aa11.69□□□□□ -0.54
DDR1-235ENST00000428153 LRCOL1A6NCL2 159 aa11.69□□□□□ -0.54
DDR1-235ENST00000428153 F6UZH7 168 aa11.69□□□□□ -0.54
DDR1-235ENST00000428153 PSCAO43653 123 aa11.69□□□□□ -0.54
DDR1-235ENST00000428153 K7EQM0 130 aa11.68□□□□□ -0.54
DDR1-235ENST00000428153 RS1O15537 224 aa11.68□□□□□ -0.54
DDR1-235ENST00000428153 ZNF876PQ49A33 203 aa11.68□□□□□ -0.54
DDR1-235ENST00000428153 SLC25A29Q8N8R3 303 aa11.68□□□□□ -0.54
DDR1-235ENST00000428153 C5orf17Q8NAS9 161 aa11.68□□□□□ -0.54
DDR1-235ENST00000428153 OR10G9Q8NGN4 311 aa11.68□□□□□ -0.54
DDR1-235ENST00000428153 OR10G7Q8NGN6 311 aa11.68□□□□□ -0.54
DDR1-235ENST00000428153 SUN5Q8TC36 379 aa11.68□□□□□ -0.54
DDR1-235ENST00000428153 SH3BGRL3Q9H299 93 aa11.68□□□□□ -0.54
DDR1-235ENST00000428153 WFDC1Q9HC57 220 aa11.68□□□□□ -0.54
DDR1-235ENST00000428153 IGLV5-52A0A0A0MRZ9 124 aa11.67□□□□□ -0.54
DDR1-235ENST00000428153 TAAR5O14804 337 aa11.67□□□□□ -0.54
DDR1-235ENST00000428153 STAG3L2P0CL84 134 aa11.67□□□□□ -0.54
DDR1-235ENST00000428153 STAG3L3P0CL85 134 aa11.67□□□□□ -0.54
DDR1-235ENST00000428153 DEFA1P59665 94 aa11.67□□□□□ -0.54
DDR1-235ENST00000428153 DEFA3P59666 94 aa11.67□□□□□ -0.54
DDR1-235ENST00000428153 RAB2AP61019 212 aa11.67□□□□□ -0.54
DDR1-235ENST00000428153 LAGE3Q14657 143 aa11.67□□□□□ -0.54
DDR1-235ENST00000428153 LELP1Q5T871 98 aa11.67□□□□□ -0.54
DDR1-235ENST00000428153 CFAP126Q5VTH2 177 aa11.67□□□□□ -0.54
DDR1-235ENST00000428153 OR2G3Q8NGZ4 309 aa11.67□□□□□ -0.54
DDR1-235ENST00000428153 FAM229AH3BQW9 127 aa11.66□□□□□ -0.54
DDR1-235ENST00000428153 C1QBP02746 253 aa11.66□□□□□ -0.54
DDR1-235ENST00000428153 TCRAP04437 139 aa11.66□□□□□ -0.54
DDR1-235ENST00000428153 MGST1P10620 155 aaKnown RBP11.66□□□□□ -0.54
DDR1-235ENST00000428153 CDC34P49427 236 aaPredicted RBP11.66□□□□□ -0.54
DDR1-235ENST00000428153 GNG5P63218 68 aa11.66□□□□□ -0.54
DDR1-235ENST00000428153 PIK3CD-AS1Q5SR53 167 aa11.66□□□□□ -0.54
DDR1-235ENST00000428153 C9orf85Q96MD7 179 aa11.66□□□□□ -0.54
DDR1-235ENST00000428153 A6NHS1 94 aa11.65□□□□□ -0.54
DDR1-235ENST00000428153 EIF3GO75821 320 aaKnown RBP eCLIP11.65□□□□□ -0.54
DDR1-235ENST00000428153 ARL14EPLP0DKL9 152 aa11.65□□□□□ -0.54
DDR1-235ENST00000428153 OR10J3Q5JRS4 329 aa11.65□□□□□ -0.54
DDR1-235ENST00000428153 Q8N814 137 aa11.65□□□□□ -0.54
DDR1-235ENST00000428153 PSMG3Q9BT73 122 aaPredicted RBP11.65□□□□□ -0.54
DDR1-235ENST00000428153 FLG2Q5D862 2391 aaPredicted RBP11.65□□□□□ -0.54
DDR1-235ENST00000428153 MBP02144 154 aa11.64□□□□□ -0.55
DDR1-235ENST00000428153 SERF2P84101 59 aa11.64□□□□□ -0.55
DDR1-235ENST00000428153 ZFP69Q49AA0 526 aa11.64□□□□□ -0.55
DDR1-235ENST00000428153 DPPA3Q6W0C5 159 aa11.64□□□□□ -0.55
DDR1-235ENST00000428153 GTSF1LQ9H1H1 148 aa11.64□□□□□ -0.55
DDR1-235ENST00000428153 C11orf21Q9P2W6 132 aa11.64□□□□□ -0.55
DDR1-235ENST00000428153 PSG8Q9UQ74 426 aa11.64□□□□□ -0.55
DDR1-235ENST00000428153 GCGP01275 180 aa11.63□□□□□ -0.55
DDR1-235ENST00000428153 ZNF80P51504 273 aaPredicted RBP11.63□□□□□ -0.55
DDR1-235ENST00000428153 SMUG1Q53HV7 270 aa11.63□□□□□ -0.55
DDR1-235ENST00000428153 TMEM75Q8N9X5 138 aa11.63□□□□□ -0.55
DDR1-235ENST00000428153 ATP6V0E2Q8NHE4 81 aa11.63□□□□□ -0.55
DDR1-235ENST00000428153 TM2D2Q9BX73 214 aa11.63□□□□□ -0.55
DDR1-235ENST00000428153 BATF3Q9NR55 127 aa11.63□□□□□ -0.55
DDR1-235ENST00000428153 TMEM167BQ9NRX6 74 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms