RNA–Protein interactions for RNA: ENST00000428120.5

FAAP20-209, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 2,313 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-209ENST00000428120 MRPL51Q4U2R6 128 aaKnown RBP17.41■□□□□ 0.38
FAAP20-209ENST00000428120 C4orf3Q8WVX3 66 aa17.41■□□□□ 0.38
FAAP20-209ENST00000428120 TIMM8BQ9Y5J9 83 aaPredicted RBP17.41■□□□□ 0.38
FAAP20-209ENST00000428120 LINC01619G3V211 115 aa17.4■□□□□ 0.38
FAAP20-209ENST00000428120 SMKR1H3BMG3 65 aa17.4■□□□□ 0.38
FAAP20-209ENST00000428120 DPF1Q92782 380 aa17.39■□□□□ 0.38
FAAP20-209ENST00000428120 H3BVH4 76 aa17.39■□□□□ 0.37
FAAP20-209ENST00000428120 LINC00614P0C842 121 aa17.39■□□□□ 0.37
FAAP20-209ENST00000428120 TRAV21A0A0B4J279 112 aa17.38■□□□□ 0.37
FAAP20-209ENST00000428120 K7EQG2 157 aa17.38■□□□□ 0.37
FAAP20-209ENST00000428120 IGKV3-20P01619 116 aa17.38■□□□□ 0.37
FAAP20-209ENST00000428120 SAMD13Q5VXD3 122 aa17.38■□□□□ 0.37
FAAP20-209ENST00000428120 OR1N2Q8NGR9 330 aa17.38■□□□□ 0.37
FAAP20-209ENST00000428120 OTOGQ6ZRI0 2925 aa17.38■□□□□ 0.37
FAAP20-209ENST00000428120 SPRY2O43597 315 aa17.38■□□□□ 0.37
FAAP20-209ENST00000428120 NCR2O95944 276 aa17.38■□□□□ 0.37
FAAP20-209ENST00000428120 C3orf79P0CE67 100 aa17.38■□□□□ 0.37
FAAP20-209ENST00000428120 SNRPD3P62318 126 aaKnown RBP17.38■□□□□ 0.37
FAAP20-209ENST00000428120 IGHV1-24A0A0C4DH33 117 aa17.37■□□□□ 0.37
FAAP20-209ENST00000428120 PKIAP61925 76 aa17.37■□□□□ 0.37
FAAP20-209ENST00000428120 TDRG1Q3Y452 100 aa17.37■□□□□ 0.37
FAAP20-209ENST00000428120 PRELID3AQ96N28 172 aa17.37■□□□□ 0.37
FAAP20-209ENST00000428120 TMEM191AQ9H0A3 160 aa17.37■□□□□ 0.37
FAAP20-209ENST00000428120 LOC389332A0A1B0GUA5 103 aa17.37■□□□□ 0.37
FAAP20-209ENST00000428120 ORMDL3Q8N138 153 aa17.37■□□□□ 0.37
FAAP20-209ENST00000428120 CHCHD1Q96BP2 118 aaKnown RBP17.37■□□□□ 0.37
FAAP20-209ENST00000428120 A0A1W2PRX2 142 aa17.36■□□□□ 0.37
FAAP20-209ENST00000428120 TSTD3H0UI37 97 aa17.36■□□□□ 0.37
FAAP20-209ENST00000428120 CKS2P33552 79 aa17.36■□□□□ 0.37
FAAP20-209ENST00000428120 ANXA2RQ3ZCQ2 193 aa17.36■□□□□ 0.37
FAAP20-209ENST00000428120 Q8N976 141 aa17.36■□□□□ 0.37
FAAP20-209ENST00000428120 DLX4Q92988 240 aaPredicted RBP17.36■□□□□ 0.37
FAAP20-209ENST00000428120 EBLN2Q6P2I7 272 aa17.35■□□□□ 0.37
FAAP20-209ENST00000428120 RNF185Q96GF1 192 aa17.35■□□□□ 0.37
FAAP20-209ENST00000428120 U3KQK5 164 aa17.35■□□□□ 0.37
FAAP20-209ENST00000428120 GAS8-AS1O95177 125 aa17.35■□□□□ 0.37
FAAP20-209ENST00000428120 EVI2AP22794 236 aa17.35■□□□□ 0.37
FAAP20-209ENST00000428120 OR9G4Q8NGQ1 327 aa17.35■□□□□ 0.37
FAAP20-209ENST00000428120 RAB4AP20338 218 aa17.33■□□□□ 0.37
FAAP20-209ENST00000428120 IFI27P40305 119 aaPredicted RBP17.33■□□□□ 0.37
FAAP20-209ENST00000428120 SPANXN1Q5VSR9 72 aa17.33■□□□□ 0.37
FAAP20-209ENST00000428120 APRG1Q8IVJ8 170 aa17.33■□□□□ 0.37
FAAP20-209ENST00000428120 PRSS3P2Q8NHM4 247 aa17.33■□□□□ 0.37
FAAP20-209ENST00000428120 CD28P10747 220 aa17.33■□□□□ 0.36
FAAP20-209ENST00000428120 LINC00173Q6ZV60 143 aa17.33■□□□□ 0.36
FAAP20-209ENST00000428120 A0A0J9YX75 114 aa17.32■□□□□ 0.36
FAAP20-209ENST00000428120 GNRH2O43555 120 aa17.32■□□□□ 0.36
FAAP20-209ENST00000428120 OR5AL1P0C617 328 aa17.32■□□□□ 0.36
FAAP20-209ENST00000428120 SETXQ7Z333 2677 aaKnown RBP17.32■□□□□ 0.36
FAAP20-209ENST00000428120 KLLNB2CW77 178 aa17.32■□□□□ 0.36
FAAP20-209ENST00000428120 NPYP01303 97 aa17.32■□□□□ 0.36
FAAP20-209ENST00000428120 S100A4P26447 101 aaKnown RBP17.32■□□□□ 0.36
FAAP20-209ENST00000428120 NIPBLQ6KC79 2804 aaeCLIP17.32■□□□□ 0.36
FAAP20-209ENST00000428120 TRBV7-9A0A0J9YWB2 115 aa17.31■□□□□ 0.36
FAAP20-209ENST00000428120 SNAI2O43623 268 aa17.31■□□□□ 0.36
FAAP20-209ENST00000428120 RNASE1P07998 156 aaKnown RBP17.31■□□□□ 0.36
FAAP20-209ENST00000428120 TEX43Q6ZNM6 134 aa17.31■□□□□ 0.36
FAAP20-209ENST00000428120 AP5S1Q9NUS5 200 aa17.31■□□□□ 0.36
FAAP20-209ENST00000428120 SIGLEC8Q9NYZ4 499 aa17.31■□□□□ 0.36
FAAP20-209ENST00000428120 TRAV12-2A0A075B6T6 113 aa17.31■□□□□ 0.36
FAAP20-209ENST00000428120 TRAV12-3A0A0B4J271 114 aa17.31■□□□□ 0.36
FAAP20-209ENST00000428120 DMRTA1Q5VZB9 504 aa17.31■□□□□ 0.36
FAAP20-209ENST00000428120 FA2HQ7L5A8 372 aa17.31■□□□□ 0.36
FAAP20-209ENST00000428120 PEMTQ9UBM1 199 aa17.31■□□□□ 0.36
FAAP20-209ENST00000428120 RAX2Q96IS3 184 aa17.3■□□□□ 0.36
FAAP20-209ENST00000428120 M0R381 172 aa17.3■□□□□ 0.36
FAAP20-209ENST00000428120 GATA1P15976 413 aaPredicted RBP17.3■□□□□ 0.36
FAAP20-209ENST00000428120 DDTP30046 118 aa17.3■□□□□ 0.36
FAAP20-209ENST00000428120 ASIPP42127 132 aa17.3■□□□□ 0.36
FAAP20-209ENST00000428120 TMEM61Q8N0U2 210 aa17.3■□□□□ 0.36
FAAP20-209ENST00000428120 LINC01006Q8NI28 216 aa17.3■□□□□ 0.36
FAAP20-209ENST00000428120 PAM16Q9Y3D7 125 aa17.29■□□□□ 0.36
FAAP20-209ENST00000428120 LEPROTL1O95214 131 aa17.29■□□□□ 0.36
FAAP20-209ENST00000428120 ATOH7Q8N100 152 aa17.28■□□□□ 0.36
FAAP20-209ENST00000428120 CITED2Q99967 270 aaPredicted RBP17.28■□□□□ 0.36
FAAP20-209ENST00000428120 TRAV26-2A0A0B4J265 109 aa17.27■□□□□ 0.35
FAAP20-209ENST00000428120 BTF3P20290 206 aaKnown RBP17.27■□□□□ 0.35
FAAP20-209ENST00000428120 FXYD7P58549 80 aa17.27■□□□□ 0.35
FAAP20-209ENST00000428120 SPINK13Q1W4C9 94 aa17.27■□□□□ 0.35
FAAP20-209ENST00000428120 SPATA12Q7Z6I5 190 aa17.27■□□□□ 0.35
FAAP20-209ENST00000428120 ZNF418Q8TF45 676 aaPredicted RBP17.27■□□□□ 0.35
FAAP20-209ENST00000428120 CACNG7P62955 275 aa17.26■□□□□ 0.35
FAAP20-209ENST00000428120 SMIM15Q7Z3B0 74 aa17.26■□□□□ 0.35
FAAP20-209ENST00000428120 DYNLRB2Q8TF09 96 aa17.26■□□□□ 0.35
FAAP20-209ENST00000428120 VAMP8Q9BV40 100 aa17.26■□□□□ 0.35
FAAP20-209ENST00000428120 PHLDA3Q9Y5J5 127 aa17.26■□□□□ 0.35
FAAP20-209ENST00000428120 LY6G6DO95868 133 aa17.26■□□□□ 0.35
FAAP20-209ENST00000428120 RNASE3P12724 160 aaKnown RBP17.26■□□□□ 0.35
FAAP20-209ENST00000428120 SCGB2A2Q13296 93 aa17.26■□□□□ 0.35
FAAP20-209ENST00000428120 ZNF124Q15973 351 aa17.26■□□□□ 0.35
FAAP20-209ENST00000428120 IGHV4-4A0A075B6R2 117 aa17.25■□□□□ 0.35
FAAP20-209ENST00000428120 KNCNA6PVL3 124 aa17.25■□□□□ 0.35
FAAP20-209ENST00000428120 FAM159AQ6UWV7 190 aa17.25■□□□□ 0.35
FAAP20-209ENST00000428120 C7orf71A4D174 169 aa17.25■□□□□ 0.35
FAAP20-209ENST00000428120 LEPP41159 167 aa17.25■□□□□ 0.35
FAAP20-209ENST00000428120 DEFB131AP59861 70 aa17.25■□□□□ 0.35
FAAP20-209ENST00000428120 HILS1P60008 231 aa17.25■□□□□ 0.35
FAAP20-209ENST00000428120 TCF21O43680 179 aa17.24■□□□□ 0.35
FAAP20-209ENST00000428120 FOXI2Q6ZQN5 318 aa17.24■□□□□ 0.35
FAAP20-209ENST00000428120 MUC4Q99102 2169 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms