RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 ZGRF1Q86YA3 2104 aa10.34□□□□□ -0.75
SPG11-202ENST00000427534 PDE6HQ13956 83 aa10.34□□□□□ -0.75
SPG11-202ENST00000427534 IGHV1-24A0A0C4DH33 117 aa10.34□□□□□ -0.75
SPG11-202ENST00000427534 TIRAPP58753 221 aa10.34□□□□□ -0.75
SPG11-202ENST00000427534 AJUBAQ96IF1 538 aa10.33□□□□□ -0.76
SPG11-202ENST00000427534 KLF2Q9Y5W3 355 aaPredicted RBP10.33□□□□□ -0.76
SPG11-202ENST00000427534 C15orf65H3BRN8 121 aa10.33□□□□□ -0.76
SPG11-202ENST00000427534 C1orf43Q9BWL3 253 aa10.33□□□□□ -0.76
SPG11-202ENST00000427534 IGHV2-70P01814 119 aa10.33□□□□□ -0.76
SPG11-202ENST00000427534 SIGMAR1Q99720 223 aa10.33□□□□□ -0.76
SPG11-202ENST00000427534 YPEL3P61236 119 aaPredicted RBP10.33□□□□□ -0.76
SPG11-202ENST00000427534 C1orf194Q5T5A4 169 aa10.33□□□□□ -0.76
SPG11-202ENST00000427534 MRPL53Q96EL3 112 aaKnown RBP10.33□□□□□ -0.76
SPG11-202ENST00000427534 GFRA4Q9GZZ7 299 aa10.33□□□□□ -0.76
SPG11-202ENST00000427534 IGLV3-1P01715 115 aa10.33□□□□□ -0.76
SPG11-202ENST00000427534 NPYP01303 97 aa10.32□□□□□ -0.76
SPG11-202ENST00000427534 CCL18P55774 89 aa10.32□□□□□ -0.76
SPG11-202ENST00000427534 RIF1Q5UIP0 2472 aaKnown RBP10.32□□□□□ -0.76
SPG11-202ENST00000427534 NLRC5Q86WI3 1866 aa10.32□□□□□ -0.76
SPG11-202ENST00000427534 RPL39LQ96EH5 51 aaKnown RBP10.32□□□□□ -0.76
SPG11-202ENST00000427534 ABCA1O95477 2261 aa10.32□□□□□ -0.76
SPG11-202ENST00000427534 ZNF503Q96F45 646 aa10.32□□□□□ -0.76
SPG11-202ENST00000427534 PCNX1Q96RV3 2341 aa10.32□□□□□ -0.76
SPG11-202ENST00000427534 SLAQ13239 276 aa10.32□□□□□ -0.76
SPG11-202ENST00000427534 LINC00311Q8N616 119 aa10.32□□□□□ -0.76
SPG11-202ENST00000427534 NDUFA12Q9UI09 145 aa10.31□□□□□ -0.76
SPG11-202ENST00000427534 ZNF726P1Q15940 193 aa10.31□□□□□ -0.76
SPG11-202ENST00000427534 BOD1L2Q8IYS8 172 aa10.31□□□□□ -0.76
SPG11-202ENST00000427534 NCKAP5O14513 1909 aa10.31□□□□□ -0.76
SPG11-202ENST00000427534 PRSS46E5RG02 174 aa10.31□□□□□ -0.76
SPG11-202ENST00000427534 PYY3Q5JQD4 70 aa10.31□□□□□ -0.76
SPG11-202ENST00000427534 DEFB125Q8N687 156 aa10.31□□□□□ -0.76
SPG11-202ENST00000427534 DAND5Q8N907 189 aa10.31□□□□□ -0.76
SPG11-202ENST00000427534 ZNF492Q9P255 531 aa10.3□□□□□ -0.76
SPG11-202ENST00000427534 NBASA2RRP1 2371 aa10.3□□□□□ -0.76
SPG11-202ENST00000427534 RNF138Q8WVD3 245 aa10.3□□□□□ -0.76
SPG11-202ENST00000427534 CAMK2N2Q96S95 79 aa10.3□□□□□ -0.76
SPG11-202ENST00000427534 RHODO00212 210 aa10.3□□□□□ -0.76
SPG11-202ENST00000427534 ZFAND6Q6FIF0 208 aa10.3□□□□□ -0.76
SPG11-202ENST00000427534 AMTNQ6UX39 209 aa10.3□□□□□ -0.76
SPG11-202ENST00000427534 DSCR8Q96T75 97 aa10.3□□□□□ -0.76
SPG11-202ENST00000427534 C19orf84I3L1E1 186 aa10.3□□□□□ -0.76
SPG11-202ENST00000427534 ELANEP08246 267 aa10.3□□□□□ -0.76
SPG11-202ENST00000427534 HEATR5AQ86XA9 2040 aa10.3□□□□□ -0.76
SPG11-202ENST00000427534 NOTCH4Q99466 2003 aa10.3□□□□□ -0.76
SPG11-202ENST00000427534 PLCE1Q9P212 2302 aa10.3□□□□□ -0.76
SPG11-202ENST00000427534 FAM104BQ5XKR9 115 aa10.3□□□□□ -0.76
SPG11-202ENST00000427534 COL4A3Q01955 1670 aa10.3□□□□□ -0.76
SPG11-202ENST00000427534 DNAJC30Q96LL9 226 aa10.29□□□□□ -0.76
SPG11-202ENST00000427534 SLX1AQ9BQ83 275 aa10.29□□□□□ -0.76
SPG11-202ENST00000427534 M0R2N4 97 aa10.29□□□□□ -0.76
SPG11-202ENST00000427534 TRBV12-3P01733 135 aa10.29□□□□□ -0.76
SPG11-202ENST00000427534 MAJINQ3KP22 176 aa10.29□□□□□ -0.76
SPG11-202ENST00000427534 IGKV2-24A0A0C4DH68 120 aa10.29□□□□□ -0.76
SPG11-202ENST00000427534 FGF6P10767 208 aa10.29□□□□□ -0.76
SPG11-202ENST00000427534 Q8N8P6 123 aa10.29□□□□□ -0.76
SPG11-202ENST00000427534 SOCS3O14543 225 aa10.28□□□□□ -0.76
SPG11-202ENST00000427534 RHOHQ15669 191 aa10.28□□□□□ -0.76
SPG11-202ENST00000427534 ICOSQ9Y6W8 199 aa10.28□□□□□ -0.76
SPG11-202ENST00000427534 GTSF1Q8WW33 167 aa10.28□□□□□ -0.76
SPG11-202ENST00000427534 MRPL35Q9NZE8 188 aaKnown RBP10.28□□□□□ -0.76
SPG11-202ENST00000427534 SIGLEC8Q9NYZ4 499 aa10.28□□□□□ -0.76
SPG11-202ENST00000427534 DKK2Q9UBU2 259 aa10.28□□□□□ -0.76
SPG11-202ENST00000427534 COX11Q9Y6N1 276 aa10.28□□□□□ -0.76
SPG11-202ENST00000427534 TMEM141Q96I45 108 aa10.28□□□□□ -0.76
SPG11-202ENST00000427534 A0A1W2PNU3 283 aaPredicted RBP10.28□□□□□ -0.76
SPG11-202ENST00000427534 SEM1Q6ZVN7 128 aa10.28□□□□□ -0.76
SPG11-202ENST00000427534 TEX48A0A1B0GUV7 120 aa10.28□□□□□ -0.76
SPG11-202ENST00000427534 IGLC1P0CG04 106 aa10.28□□□□□ -0.76
SPG11-202ENST00000427534 FOXI2Q6ZQN5 318 aa10.28□□□□□ -0.76
SPG11-202ENST00000427534 TRAV4A0A0B4J268 109 aa10.27□□□□□ -0.76
SPG11-202ENST00000427534 IGHG4P01861 327 aa10.27□□□□□ -0.76
SPG11-202ENST00000427534 EGR2P11161 476 aaPredicted RBP10.27□□□□□ -0.76
SPG11-202ENST00000427534 C9orf153Q5TBE3 101 aa10.27□□□□□ -0.76
SPG11-202ENST00000427534 FANCD2OSQ96PS1 177 aa10.27□□□□□ -0.76
SPG11-202ENST00000427534 UBE2AP49459 152 aa10.27□□□□□ -0.77
SPG11-202ENST00000427534 FXYD5Q96DB9 178 aa10.27□□□□□ -0.77
SPG11-202ENST00000427534 PLXNA2O75051 1894 aa10.27□□□□□ -0.77
SPG11-202ENST00000427534 SPART-AS1P0CW21 52 aa10.27□□□□□ -0.77
SPG11-202ENST00000427534 Q0VG73 95 aa10.26□□□□□ -0.77
SPG11-202ENST00000427534 ZNF491Q8N8L2 437 aa10.26□□□□□ -0.77
SPG11-202ENST00000427534 Q9H8V8 135 aa10.26□□□□□ -0.77
SPG11-202ENST00000427534 A0A096LNI7 61 aa10.26□□□□□ -0.77
SPG11-202ENST00000427534 FAM231BA6NCW3 169 aa10.26□□□□□ -0.77
SPG11-202ENST00000427534 ETDCA0A1B0GVM5 59 aa10.26□□□□□ -0.77
SPG11-202ENST00000427534 CT83Q5H943 113 aa10.26□□□□□ -0.77
SPG11-202ENST00000427534 C10orf105Q8TEF2 133 aa10.25□□□□□ -0.77
SPG11-202ENST00000427534 IGHV7-81A0A0B4J1V7 117 aa10.25□□□□□ -0.77
SPG11-202ENST00000427534 DNAJC9-AS1A6NH13 148 aa10.25□□□□□ -0.77
SPG11-202ENST00000427534 DENND4AQ7Z401 1863 aa10.25□□□□□ -0.77
SPG11-202ENST00000427534 C18orf32Q8TCD1 76 aa10.25□□□□□ -0.77
SPG11-202ENST00000427534 AGPAT4-IT1Q9H0P7 198 aa10.25□□□□□ -0.77
SPG11-202ENST00000427534 KAAG1Q9UBP8 84 aa10.25□□□□□ -0.77
SPG11-202ENST00000427534 HIGD2BQ4VC39 106 aa10.25□□□□□ -0.77
SPG11-202ENST00000427534 ATP6V0E2Q8NHE4 81 aa10.24□□□□□ -0.77
SPG11-202ENST00000427534 IGLV2-18A0A075B6J9 118 aa10.24□□□□□ -0.77
SPG11-202ENST00000427534 C11orf53Q8IXP5 236 aa10.24□□□□□ -0.77
SPG11-202ENST00000427534 TMEM14CQ9P0S9 112 aa10.24□□□□□ -0.77
SPG11-202ENST00000427534 ANAPC1Q9H1A4 1944 aa10.24□□□□□ -0.77
SPG11-202ENST00000427534 ZNF664Q8N3J9 261 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms