RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 PAX4O43316 350 aa12.15□□□□□ -0.46
SLC6A1-202ENST00000425938 PPT1P50897 306 aa12.15□□□□□ -0.46
SLC6A1-202ENST00000425938 STOML3Q8TAV4 291 aa12.15□□□□□ -0.46
SLC6A1-202ENST00000425938 RASL10AQ92737 203 aa12.15□□□□□ -0.46
SLC6A1-202ENST00000425938 VSIG2Q96IQ7 327 aa12.15□□□□□ -0.46
SLC6A1-202ENST00000425938 MAP1LC3BQ9GZQ8 125 aa12.15□□□□□ -0.46
SLC6A1-202ENST00000425938 PRO0255Q9UI72 69 aa12.15□□□□□ -0.46
SLC6A1-202ENST00000425938 HERC2O95714 4834 aa12.14□□□□□ -0.47
SLC6A1-202ENST00000425938 RTL8CO15255 209 aa12.14□□□□□ -0.47
SLC6A1-202ENST00000425938 GNRH2O43555 120 aa12.14□□□□□ -0.47
SLC6A1-202ENST00000425938 GCGP01275 180 aa12.14□□□□□ -0.47
SLC6A1-202ENST00000425938 SMUG1Q53HV7 270 aa12.14□□□□□ -0.47
SLC6A1-202ENST00000425938 SAPCD1Q5SSQ6 148 aa12.14□□□□□ -0.47
SLC6A1-202ENST00000425938 C1orf134Q5TEV5 83 aa12.14□□□□□ -0.47
SLC6A1-202ENST00000425938 C8orf49Q96NF6 230 aa12.14□□□□□ -0.47
SLC6A1-202ENST00000425938 TRGV4A0A0C4DH28 118 aa12.13□□□□□ -0.47
SLC6A1-202ENST00000425938 IGHV3-16A0A0C4DH30 117 aa12.13□□□□□ -0.47
SLC6A1-202ENST00000425938 NBDYA0A0U1RRE5 68 aa12.13□□□□□ -0.47
SLC6A1-202ENST00000425938 PRSS29PA6NIE9 313 aa12.13□□□□□ -0.47
SLC6A1-202ENST00000425938 M0R2P5 195 aa12.13□□□□□ -0.47
SLC6A1-202ENST00000425938 IGLV2-11P01706 119 aa12.13□□□□□ -0.47
SLC6A1-202ENST00000425938 TYMSP04818 313 aa12.13□□□□□ -0.47
SLC6A1-202ENST00000425938 OR11H4Q8NGC9 324 aa12.13□□□□□ -0.47
SLC6A1-202ENST00000425938 ZNF471Q9BX82 626 aaPredicted RBP12.13□□□□□ -0.47
SLC6A1-202ENST00000425938 HHLA3Q9XRX5 114 aa12.13□□□□□ -0.47
SLC6A1-202ENST00000425938 ICOSQ9Y6W8 199 aa12.13□□□□□ -0.47
SLC6A1-202ENST00000425938 A0A096LPF7 62 aa12.12□□□□□ -0.47
SLC6A1-202ENST00000425938 FAM74A7A6NL05 159 aa12.12□□□□□ -0.47
SLC6A1-202ENST00000425938 PEX7O00628 323 aa12.12□□□□□ -0.47
SLC6A1-202ENST00000425938 BCL2L11O43521 198 aa12.12□□□□□ -0.47
SLC6A1-202ENST00000425938 PFN1P07737 140 aaKnown RBP12.12□□□□□ -0.47
SLC6A1-202ENST00000425938 SEC11BP0C7V7 166 aa12.12□□□□□ -0.47
SLC6A1-202ENST00000425938 EIF5AP63241 154 aaKnown RBP12.12□□□□□ -0.47
SLC6A1-202ENST00000425938 ESRGQ1W209 222 aa12.12□□□□□ -0.47
SLC6A1-202ENST00000425938 HIST1H2BAQ96A08 127 aa12.12□□□□□ -0.47
SLC6A1-202ENST00000425938 Q9H8V8 135 aa12.12□□□□□ -0.47
SLC6A1-202ENST00000425938 A0A1B0GVY2 172 aa12.11□□□□□ -0.47
SLC6A1-202ENST00000425938 UMAD1C9J7I0 102 aa12.11□□□□□ -0.47
SLC6A1-202ENST00000425938 ZNF80P51504 273 aaPredicted RBP12.11□□□□□ -0.47
SLC6A1-202ENST00000425938 CRYBA4P53673 196 aa12.11□□□□□ -0.47
SLC6A1-202ENST00000425938 FHL2Q14192 279 aa12.11□□□□□ -0.47
SLC6A1-202ENST00000425938 UPK3BQ9BT76 320 aa12.11□□□□□ -0.47
SLC6A1-202ENST00000425938 MRPS16Q9Y3D3 137 aaKnown RBP12.11□□□□□ -0.47
SLC6A1-202ENST00000425938 TRAV4A0A0B4J268 109 aa12.1□□□□□ -0.47
SLC6A1-202ENST00000425938 TRAV34A0A0B4J273 112 aa12.1□□□□□ -0.47
SLC6A1-202ENST00000425938 PFDN1O60925 122 aa12.1□□□□□ -0.47
SLC6A1-202ENST00000425938 SFTA3P0C7M3 94 aa12.1□□□□□ -0.47
SLC6A1-202ENST00000425938 OR4C5Q8NGB2 326 aa12.1□□□□□ -0.47
SLC6A1-202ENST00000425938 LINC00479Q96M42 142 aa12.1□□□□□ -0.47
SLC6A1-202ENST00000425938 ARL2-SNX15V9GYD0 113 aa12.1□□□□□ -0.47
SLC6A1-202ENST00000425938 FHITP49789 147 aa12.09□□□□□ -0.47
SLC6A1-202ENST00000425938 MRPL23Q16540 153 aaKnown RBP12.09□□□□□ -0.47
SLC6A1-202ENST00000425938 TTC32Q5I0X7 151 aa12.09□□□□□ -0.47
SLC6A1-202ENST00000425938 CST9LP1Q5W188 147 aa12.09□□□□□ -0.47
SLC6A1-202ENST00000425938 FAM213BQ8TBF2 198 aa12.09□□□□□ -0.47
SLC6A1-202ENST00000425938 ZNF479Q96JC4 524 aa12.09□□□□□ -0.47
SLC6A1-202ENST00000425938 TCEAL7Q9BRU2 100 aa12.09□□□□□ -0.47
SLC6A1-202ENST00000425938 Q86TA4 180 aa12.08□□□□□ -0.48
SLC6A1-202ENST00000425938 SFT2D1Q8WV19 159 aa12.08□□□□□ -0.48
SLC6A1-202ENST00000425938 PCNPQ8WW12 178 aaKnown RBP12.08□□□□□ -0.48
SLC6A1-202ENST00000425938 C11orf21Q9P2W6 132 aa12.08□□□□□ -0.48
SLC6A1-202ENST00000425938 KIAA1109Q2LD37 5005 aa12.08□□□□□ -0.48
SLC6A1-202ENST00000425938 TPT1P13693 172 aaKnown RBP12.07□□□□□ -0.48
SLC6A1-202ENST00000425938 DPPA3Q6W0C5 159 aa12.07□□□□□ -0.48
SLC6A1-202ENST00000425938 TMUB2Q71RG4 321 aa12.07□□□□□ -0.48
SLC6A1-202ENST00000425938 C6orf223Q8N319 242 aa12.07□□□□□ -0.48
SLC6A1-202ENST00000425938 PKHD1P08F94 4074 aa12.06□□□□□ -0.48
SLC6A1-202ENST00000425938 FABP5P3A8MUU1 101 aa12.06□□□□□ -0.48
SLC6A1-202ENST00000425938 C9JCJ5 164 aa12.06□□□□□ -0.48
SLC6A1-202ENST00000425938 ORM1P02763 201 aa12.06□□□□□ -0.48
SLC6A1-202ENST00000425938 SRIP30626 198 aa12.06□□□□□ -0.48
SLC6A1-202ENST00000425938 UBE2G1P62253 170 aa12.06□□□□□ -0.48
SLC6A1-202ENST00000425938 ZNF876PQ49A33 203 aa12.06□□□□□ -0.48
SLC6A1-202ENST00000425938 NEGR1Q7Z3B1 354 aa12.06□□□□□ -0.48
SLC6A1-202ENST00000425938 MBD3L1Q8WWY6 194 aa12.06□□□□□ -0.48
SLC6A1-202ENST00000425938 FMC1Q96HJ9 113 aa12.06□□□□□ -0.48
SLC6A1-202ENST00000425938 ZFP30Q9Y2G7 519 aa12.06□□□□□ -0.48
SLC6A1-202ENST00000425938 PKD1P98161 4303 aa12.05□□□□□ -0.48
SLC6A1-202ENST00000425938 C9orf85Q96MD7 179 aa12.05□□□□□ -0.48
SLC6A1-202ENST00000425938 A0A1B0GV50 99 aa12.04□□□□□ -0.48
SLC6A1-202ENST00000425938 A0A1W2PPQ1 181 aa12.04□□□□□ -0.48
SLC6A1-202ENST00000425938 K7EQD1 137 aa12.04□□□□□ -0.48
SLC6A1-202ENST00000425938 PAGE4O60829 102 aa12.04□□□□□ -0.48
SLC6A1-202ENST00000425938 GYPEP15421 78 aa12.04□□□□□ -0.48
SLC6A1-202ENST00000425938 S100A4P26447 101 aaKnown RBP12.04□□□□□ -0.48
SLC6A1-202ENST00000425938 AKR1C3P42330 323 aa12.04□□□□□ -0.48
SLC6A1-202ENST00000425938 DNAH11Q96DT5 4516 aa12.03□□□□□ -0.48
SLC6A1-202ENST00000425938 CIDEAO60543 219 aa12.03□□□□□ -0.48
SLC6A1-202ENST00000425938 H2AFB1P0C5Y9 115 aa12.03□□□□□ -0.48
SLC6A1-202ENST00000425938 EIF5AL1Q6IS14 154 aaKnown RBP12.03□□□□□ -0.48
SLC6A1-202ENST00000425938 TCTE3Q8IZS6 198 aa12.03□□□□□ -0.48
SLC6A1-202ENST00000425938 PTH2Q96A98 100 aa12.03□□□□□ -0.48
SLC6A1-202ENST00000425938 TXNDC17Q9BRA2 123 aa12.03□□□□□ -0.48
SLC6A1-202ENST00000425938 DYNC1H1Q14204 4646 aaKnown RBP12.03□□□□□ -0.48
SLC6A1-202ENST00000425938 IGKV3D-20A0A0C4DH25 116 aa12.02□□□□□ -0.49
SLC6A1-202ENST00000425938 TRBV6-1A0A0K0K1D8 114 aa12.02□□□□□ -0.49
SLC6A1-202ENST00000425938 SIVA1O15304 175 aa12.02□□□□□ -0.49
SLC6A1-202ENST00000425938 NXPH4O95158 308 aa12.02□□□□□ -0.49
SLC6A1-202ENST00000425938 ASIPP42127 132 aa12.02□□□□□ -0.49
SLC6A1-202ENST00000425938 LGALSLQ3ZCW2 172 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms