RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 NF1P21359 2839 aa7.09□□□□□ -1.27
HMGB4-201ENST00000425537 IFITM10A6NMD0 228 aa7.09□□□□□ -1.27
HMGB4-201ENST00000425537 KLLNB2CW77 178 aa7.09□□□□□ -1.27
HMGB4-201ENST00000425537 HSBP1O75506 76 aa7.09□□□□□ -1.27
HMGB4-201ENST00000425537 CSN3P07498 182 aa7.09□□□□□ -1.27
HMGB4-201ENST00000425537 ZNF705DP0CH99 300 aaPredicted RBP7.09□□□□□ -1.27
HMGB4-201ENST00000425537 ZNF705BP0CI00 300 aaPredicted RBP7.09□□□□□ -1.27
HMGB4-201ENST00000425537 PRB4P10163 310 aaPredicted RBP7.09□□□□□ -1.27
HMGB4-201ENST00000425537 NTF3P20783 257 aa7.09□□□□□ -1.27
HMGB4-201ENST00000425537 RNASE4P34096 147 aaKnown RBP7.09□□□□□ -1.27
HMGB4-201ENST00000425537 SPANXN1Q5VSR9 72 aa7.09□□□□□ -1.27
HMGB4-201ENST00000425537 FAM104BQ5XKR9 115 aa7.09□□□□□ -1.27
HMGB4-201ENST00000425537 FAM159AQ6UWV7 190 aa7.09□□□□□ -1.27
HMGB4-201ENST00000425537 C18orf65Q6ZTR6 163 aa7.09□□□□□ -1.27
HMGB4-201ENST00000425537 TMEM256Q8N2U0 113 aa7.09□□□□□ -1.27
HMGB4-201ENST00000425537 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.09□□□□□ -1.27
HMGB4-201ENST00000425537 OR2K2Q8NGT1 345 aa7.09□□□□□ -1.27
HMGB4-201ENST00000425537 RAX2Q96IS3 184 aa7.09□□□□□ -1.27
HMGB4-201ENST00000425537 CITED2Q99967 270 aaPredicted RBP7.09□□□□□ -1.27
HMGB4-201ENST00000425537 LAMTOR2Q9Y2Q5 125 aa7.09□□□□□ -1.27
HMGB4-201ENST00000425537 SVEP1Q4LDE5 3571 aa7.08□□□□□ -1.28
HMGB4-201ENST00000425537 CUBNO60494 3623 aa7.08□□□□□ -1.28
HMGB4-201ENST00000425537 IGHV4-4A0A075B6R2 117 aa7.08□□□□□ -1.28
HMGB4-201ENST00000425537 IGKV3D-20A0A0C4DH25 116 aa7.08□□□□□ -1.28
HMGB4-201ENST00000425537 A0A1W2PRX2 142 aa7.08□□□□□ -1.28
HMGB4-201ENST00000425537 C7orf71A4D174 169 aa7.08□□□□□ -1.28
HMGB4-201ENST00000425537 SNAI2O43623 268 aa7.08□□□□□ -1.28
HMGB4-201ENST00000425537 EDN2P20800 178 aa7.08□□□□□ -1.28
HMGB4-201ENST00000425537 CDKN1BP46527 198 aa7.08□□□□□ -1.28
HMGB4-201ENST00000425537 RIPPLY3P57055 190 aa7.08□□□□□ -1.28
HMGB4-201ENST00000425537 S100A12P80511 92 aa7.08□□□□□ -1.28
HMGB4-201ENST00000425537 DEFB114Q30KQ6 69 aa7.08□□□□□ -1.28
HMGB4-201ENST00000425537 KRTAP24-1Q3LI83 254 aa7.08□□□□□ -1.28
HMGB4-201ENST00000425537 NDUFA11Q86Y39 141 aa7.08□□□□□ -1.28
HMGB4-201ENST00000425537 ORMDL3Q8N138 153 aa7.08□□□□□ -1.28
HMGB4-201ENST00000425537 NAGKQ9UJ70 344 aa7.08□□□□□ -1.28
HMGB4-201ENST00000425537 SETD2Q9BYW2 2564 aaPredicted RBP7.08□□□□□ -1.28
HMGB4-201ENST00000425537 MXRA5Q9NR99 2828 aa7.07□□□□□ -1.28
HMGB4-201ENST00000425537 F6UB75 175 aa7.07□□□□□ -1.28
HMGB4-201ENST00000425537 ZNF324O75467 553 aaPredicted RBP7.07□□□□□ -1.28
HMGB4-201ENST00000425537 AMTP48728 403 aa7.07□□□□□ -1.28
HMGB4-201ENST00000425537 PROK1P58294 105 aa7.07□□□□□ -1.28
HMGB4-201ENST00000425537 JOSD1Q15040 202 aaPredicted RBP7.07□□□□□ -1.28
HMGB4-201ENST00000425537 IQCJQ1A5X6 159 aa7.07□□□□□ -1.28
HMGB4-201ENST00000425537 HIST2H2BDQ6DRA6 164 aa7.07□□□□□ -1.28
HMGB4-201ENST00000425537 TMEM61Q8N0U2 210 aa7.07□□□□□ -1.28
HMGB4-201ENST00000425537 CLUHP3Q96NS8 147 aa7.07□□□□□ -1.28
HMGB4-201ENST00000425537 MDFIQ99750 246 aa7.07□□□□□ -1.28
HMGB4-201ENST00000425537 NIT2Q9NQR4 276 aa7.07□□□□□ -1.28
HMGB4-201ENST00000425537 PHLDA3Q9Y5J5 127 aa7.07□□□□□ -1.28
HMGB4-201ENST00000425537 J3KRW8 73 aa7.06□□□□□ -1.28
HMGB4-201ENST00000425537 LINC00614P0C842 121 aa7.06□□□□□ -1.28
HMGB4-201ENST00000425537 HLA-DRB4P13762 266 aa7.06□□□□□ -1.28
HMGB4-201ENST00000425537 CKS2P33552 79 aa7.06□□□□□ -1.28
HMGB4-201ENST00000425537 DEFB131AP59861 70 aa7.06□□□□□ -1.28
HMGB4-201ENST00000425537 ANXA2RQ3ZCQ2 193 aa7.06□□□□□ -1.28
HMGB4-201ENST00000425537 RNASEKQ6P5S7 137 aaKnown RBP7.06□□□□□ -1.28
HMGB4-201ENST00000425537 ADAMTSL5Q6ZMM2 481 aa7.06□□□□□ -1.28
HMGB4-201ENST00000425537 FA2HQ7L5A8 372 aa7.06□□□□□ -1.28
HMGB4-201ENST00000425537 NIT1Q86X76 327 aa7.06□□□□□ -1.28
HMGB4-201ENST00000425537 PRSS3P2Q8NHM4 247 aa7.06□□□□□ -1.28
HMGB4-201ENST00000425537 PRELID3AQ96N28 172 aa7.06□□□□□ -1.28
HMGB4-201ENST00000425537 DUX3Q96PT4 197 aa7.06□□□□□ -1.28
HMGB4-201ENST00000425537 C11orf21Q9P2W6 132 aa7.06□□□□□ -1.28
HMGB4-201ENST00000425537 U3KQK5 164 aa7.06□□□□□ -1.28
HMGB4-201ENST00000425537 HLA-DRB4X5D2U9 266 aa7.06□□□□□ -1.28
HMGB4-201ENST00000425537 TRGV11A0A075B6L2 103 aa7.05□□□□□ -1.28
HMGB4-201ENST00000425537 A8MTW9 85 aa7.05□□□□□ -1.28
HMGB4-201ENST00000425537 H3BVH4 76 aa7.05□□□□□ -1.28
HMGB4-201ENST00000425537 PPP1R17O96001 155 aa7.05□□□□□ -1.28
HMGB4-201ENST00000425537 TDRG1Q3Y452 100 aa7.05□□□□□ -1.28
HMGB4-201ENST00000425537 PYY3Q5JQD4 70 aa7.05□□□□□ -1.28
HMGB4-201ENST00000425537 PRR9Q5T870 116 aa7.05□□□□□ -1.28
HMGB4-201ENST00000425537 C11orf44Q8N8P7 122 aa7.05□□□□□ -1.28
HMGB4-201ENST00000425537 SYT8Q8NBV8 401 aa7.05□□□□□ -1.28
HMGB4-201ENST00000425537 C20orf144Q9BQM9 153 aa7.05□□□□□ -1.28
HMGB4-201ENST00000425537 TP53TG3Q9ULZ0 132 aa7.05□□□□□ -1.28
HMGB4-201ENST00000425537 ZFHX3Q15911 3703 aa7.04□□□□□ -1.28
HMGB4-201ENST00000425537 NIPBLQ6KC79 2804 aaeCLIP7.04□□□□□ -1.28
HMGB4-201ENST00000425537 D6R8Y8 96 aa7.04□□□□□ -1.28
HMGB4-201ENST00000425537 M0R2Z0 102 aa7.04□□□□□ -1.28
HMGB4-201ENST00000425537 SCGB1D1O95968 90 aa7.04□□□□□ -1.28
HMGB4-201ENST00000425537 PF4P02776 101 aa7.04□□□□□ -1.28
HMGB4-201ENST00000425537 CD33P20138 364 aa7.04□□□□□ -1.28
HMGB4-201ENST00000425537 NUTF2P61970 127 aaKnown RBP7.04□□□□□ -1.28
HMGB4-201ENST00000425537 CD300EQ496F6 205 aaPredicted RBP7.04□□□□□ -1.28
HMGB4-201ENST00000425537 MRPL51Q4U2R6 128 aaKnown RBP7.04□□□□□ -1.28
HMGB4-201ENST00000425537 AMN1Q8IY45 258 aa7.04□□□□□ -1.28
HMGB4-201ENST00000425537 MRAP2Q96G30 205 aa7.04□□□□□ -1.28
HMGB4-201ENST00000425537 AP1S3Q96PC3 154 aa7.04□□□□□ -1.28
HMGB4-201ENST00000425537 FAM110AQ9BQ89 295 aa7.04□□□□□ -1.28
HMGB4-201ENST00000425537 MAP1LC3AQ9H492 121 aa7.04□□□□□ -1.28
HMGB4-201ENST00000425537 MAP6D1Q9H9H5 199 aa7.04□□□□□ -1.28
HMGB4-201ENST00000425537 SELENOKQ9Y6D0 94 aa7.04□□□□□ -1.28
HMGB4-201ENST00000425537 C2CD3Q4AC94 2353 aa7.04□□□□□ -1.28
HMGB4-201ENST00000425537 JMJD1CQ15652 2540 aa7.03□□□□□ -1.28
HMGB4-201ENST00000425537 IGHV1OR15-1A0A075B7D0 117 aa7.03□□□□□ -1.28
HMGB4-201ENST00000425537 TRAV12-3A0A0B4J271 114 aa7.03□□□□□ -1.28
HMGB4-201ENST00000425537 OR11H12B2RN74 326 aa7.03□□□□□ -1.28
HMGB4-201ENST00000425537 H3BMM0 161 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms