RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 LRP1BQ9NZR2 4599 aa8.24□□□□□ -1.09
HLA-DQB3-203ENST00000425319 TRBV6-4A0A1B0GX49 114 aa8.23□□□□□ -1.09
HLA-DQB3-203ENST00000425319 A0A1W2PPV4 95 aa8.23□□□□□ -1.09
HLA-DQB3-203ENST00000425319 LRCOL1A6NCL2 159 aa8.23□□□□□ -1.09
HLA-DQB3-203ENST00000425319 PGPA6NDG6 321 aa8.23□□□□□ -1.09
HLA-DQB3-203ENST00000425319 DIRC3C9JPN6 131 aa8.23□□□□□ -1.09
HLA-DQB3-203ENST00000425319 GNRH2O43555 120 aa8.23□□□□□ -1.09
HLA-DQB3-203ENST00000425319 IGHV3-30P01768 117 aa8.23□□□□□ -1.09
HLA-DQB3-203ENST00000425319 IGHV3-33P01772 117 aa8.23□□□□□ -1.09
HLA-DQB3-203ENST00000425319 IGHV3-30-3P0DP02 117 aa8.23□□□□□ -1.09
HLA-DQB3-203ENST00000425319 IGHV3-30-5P0DP03 117 aa8.23□□□□□ -1.09
HLA-DQB3-203ENST00000425319 ASAH1Q13510 395 aa8.23□□□□□ -1.09
HLA-DQB3-203ENST00000425319 LAGE3Q14657 143 aa8.23□□□□□ -1.09
HLA-DQB3-203ENST00000425319 GCSAMLQ5JQS6 135 aa8.23□□□□□ -1.09
HLA-DQB3-203ENST00000425319 LELP1Q5T871 98 aa8.23□□□□□ -1.09
HLA-DQB3-203ENST00000425319 FXYD5Q96DB9 178 aa8.23□□□□□ -1.09
HLA-DQB3-203ENST00000425319 FAM167A-AS1Q96KT0 104 aa8.23□□□□□ -1.09
HLA-DQB3-203ENST00000425319 SEC22CQ9BRL7 303 aa8.23□□□□□ -1.09
HLA-DQB3-203ENST00000425319 TREM1Q9NP99 234 aa8.23□□□□□ -1.09
HLA-DQB3-203ENST00000425319 NUDT15Q9NV35 164 aa8.23□□□□□ -1.09
HLA-DQB3-203ENST00000425319 URGCP-MRPS24S4R325 110 aa8.23□□□□□ -1.09
HLA-DQB3-203ENST00000425319 IGHV3-16A0A0C4DH30 117 aa8.22□□□□□ -1.09
HLA-DQB3-203ENST00000425319 FAM240BA0A1B0GVZ2 78 aa8.22□□□□□ -1.09
HLA-DQB3-203ENST00000425319 GGTLC3B5MD39 225 aa8.22□□□□□ -1.09
HLA-DQB3-203ENST00000425319 GATA1P15976 413 aaPredicted RBP8.22□□□□□ -1.09
HLA-DQB3-203ENST00000425319 BTCP35070 178 aa8.22□□□□□ -1.09
HLA-DQB3-203ENST00000425319 NHLH2Q02577 135 aa8.22□□□□□ -1.09
HLA-DQB3-203ENST00000425319 ZNF876PQ49A33 203 aa8.22□□□□□ -1.09
HLA-DQB3-203ENST00000425319 KCNIP4Q6PIL6 250 aa8.22□□□□□ -1.09
HLA-DQB3-203ENST00000425319 ASB13Q8WXK3 278 aa8.22□□□□□ -1.09
HLA-DQB3-203ENST00000425319 PHYHIPLQ96FC7 376 aa8.22□□□□□ -1.09
HLA-DQB3-203ENST00000425319 WDR61Q9GZS3 305 aaKnown RBP8.22□□□□□ -1.09
HLA-DQB3-203ENST00000425319 GTSF1LQ9H1H1 148 aa8.22□□□□□ -1.09
HLA-DQB3-203ENST00000425319 C11orf1Q9H5F2 150 aa8.22□□□□□ -1.09
HLA-DQB3-203ENST00000425319 OTORQ9NRC9 128 aa8.22□□□□□ -1.09
HLA-DQB3-203ENST00000425319 MBD2Q9UBB5 411 aa8.22□□□□□ -1.09
HLA-DQB3-203ENST00000425319 RPH3ALQ9UNE2 315 aa8.22□□□□□ -1.09
HLA-DQB3-203ENST00000425319 TAAR5O14804 337 aa8.21□□□□□ -1.1
HLA-DQB3-203ENST00000425319 MGST1P10620 155 aaKnown RBP8.21□□□□□ -1.1
HLA-DQB3-203ENST00000425319 HAMPP81172 84 aa8.21□□□□□ -1.1
HLA-DQB3-203ENST00000425319 ACOT6Q3I5F7 207 aaPredicted RBP8.21□□□□□ -1.1
HLA-DQB3-203ENST00000425319 ZFP69Q49AA0 526 aa8.21□□□□□ -1.1
HLA-DQB3-203ENST00000425319 FFAR4Q5NUL3 377 aa8.21□□□□□ -1.1
HLA-DQB3-203ENST00000425319 Q6ZQT7 251 aa8.21□□□□□ -1.1
HLA-DQB3-203ENST00000425319 DMBT1Q9UGM3 2413 aaPredicted RBP8.21□□□□□ -1.1
HLA-DQB3-203ENST00000425319 A0A087WWC5 75 aa8.2□□□□□ -1.1
HLA-DQB3-203ENST00000425319 LOC100131303A0A0U1RQF7 123 aa8.2□□□□□ -1.1
HLA-DQB3-203ENST00000425319 SERTM2A0A1B0GWG4 89 aa8.2□□□□□ -1.1
HLA-DQB3-203ENST00000425319 RBFOX3A6NFN3 312 aa8.2□□□□□ -1.1
HLA-DQB3-203ENST00000425319 A6NHS1 94 aa8.2□□□□□ -1.1
HLA-DQB3-203ENST00000425319 KRTAP29-1A8MX34 341 aaPredicted RBP8.2□□□□□ -1.1
HLA-DQB3-203ENST00000425319 PET100P0DJ07 73 aa8.2□□□□□ -1.1
HLA-DQB3-203ENST00000425319 FGF8P55075 233 aaPredicted RBP8.2□□□□□ -1.1
HLA-DQB3-203ENST00000425319 PQLC2Q6ZP29 291 aa8.2□□□□□ -1.1
HLA-DQB3-203ENST00000425319 SLC25A29Q8N8R3 303 aa8.2□□□□□ -1.1
HLA-DQB3-203ENST00000425319 Q8N976 141 aa8.2□□□□□ -1.1
HLA-DQB3-203ENST00000425319 NDUFA13Q9P0J0 144 aa8.2□□□□□ -1.1
HLA-DQB3-203ENST00000425319 PLA2G10O15496 165 aa8.19□□□□□ -1.1
HLA-DQB3-203ENST00000425319 IL15RAQ13261 267 aa8.19□□□□□ -1.1
HLA-DQB3-203ENST00000425319 GOLT1AQ6ZVE7 132 aa8.19□□□□□ -1.1
HLA-DQB3-203ENST00000425319 LINC00528Q8N1L1 170 aa8.19□□□□□ -1.1
HLA-DQB3-203ENST00000425319 DNAH5Q8TE73 4624 aa8.18□□□□□ -1.1
HLA-DQB3-203ENST00000425319 TRAV8-1A0A0A6YYK1 113 aa8.18□□□□□ -1.1
HLA-DQB3-203ENST00000425319 RS1O15537 224 aa8.18□□□□□ -1.1
HLA-DQB3-203ENST00000425319 TYMSP04818 313 aa8.18□□□□□ -1.1
HLA-DQB3-203ENST00000425319 S100A4P26447 101 aaKnown RBP8.18□□□□□ -1.1
HLA-DQB3-203ENST00000425319 ELOBQ15370 118 aa8.18□□□□□ -1.1
HLA-DQB3-203ENST00000425319 LRRC37A5PQ49AS3 106 aa8.18□□□□□ -1.1
HLA-DQB3-203ENST00000425319 SDHCQ99643 169 aaPredicted RBP8.18□□□□□ -1.1
HLA-DQB3-203ENST00000425319 APOBP04114 4563 aaKnown RBP8.17□□□□□ -1.1
HLA-DQB3-203ENST00000425319 IGHV3-73A0A0B4J1V6 119 aa8.17□□□□□ -1.1
HLA-DQB3-203ENST00000425319 CFAP126Q5VTH2 177 aa8.17□□□□□ -1.1
HLA-DQB3-203ENST00000425319 PTH2Q96A98 100 aa8.17□□□□□ -1.1
HLA-DQB3-203ENST00000425319 CCDC32Q9BV29 185 aa8.17□□□□□ -1.1
HLA-DQB3-203ENST00000425319 FAM30AQ9NZY2 134 aa8.17□□□□□ -1.1
HLA-DQB3-203ENST00000425319 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.16□□□□□ -1.1
HLA-DQB3-203ENST00000425319 A8MWV9 139 aa8.16□□□□□ -1.1
HLA-DQB3-203ENST00000425319 OXTP01178 125 aa8.16□□□□□ -1.1
HLA-DQB3-203ENST00000425319 OR10G9Q8NGN4 311 aa8.16□□□□□ -1.1
HLA-DQB3-203ENST00000425319 ENKURQ8TC29 256 aa8.16□□□□□ -1.1
HLA-DQB3-203ENST00000425319 F6UZH7 168 aa8.15□□□□□ -1.1
HLA-DQB3-203ENST00000425319 LGALSLQ3ZCW2 172 aaPredicted RBP8.15□□□□□ -1.1
HLA-DQB3-203ENST00000425319 C14orf177Q52M58 125 aa8.15□□□□□ -1.1
HLA-DQB3-203ENST00000425319 SMUG1Q53HV7 270 aa8.15□□□□□ -1.1
HLA-DQB3-203ENST00000425319 SAPCD1Q5SSQ6 148 aa8.15□□□□□ -1.1
HLA-DQB3-203ENST00000425319 ZFP2Q6ZN57 461 aa8.15□□□□□ -1.1
HLA-DQB3-203ENST00000425319 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.15□□□□□ -1.1
HLA-DQB3-203ENST00000425319 RBM38Q9H0Z9 239 aaKnown RBP8.15□□□□□ -1.1
HLA-DQB3-203ENST00000425319 OR5AC2Q9NZP5 309 aa8.15□□□□□ -1.1
HLA-DQB3-203ENST00000425319 IGKV2D-24A0A075B6R9 120 aa8.14□□□□□ -1.11
HLA-DQB3-203ENST00000425319 A0A087WX48 190 aa8.14□□□□□ -1.11
HLA-DQB3-203ENST00000425319 GAGE12JA6NER3 117 aa8.14□□□□□ -1.11
HLA-DQB3-203ENST00000425319 GAGE1Q13065 139 aa8.14□□□□□ -1.11
HLA-DQB3-203ENST00000425319 GAGE4Q13068 117 aa8.14□□□□□ -1.11
HLA-DQB3-203ENST00000425319 GAGE5Q13069 117 aa8.14□□□□□ -1.11
HLA-DQB3-203ENST00000425319 GAGE13Q4V321 117 aa8.14□□□□□ -1.11
HLA-DQB3-203ENST00000425319 CYB561D1Q8N8Q1 229 aa8.14□□□□□ -1.11
HLA-DQB3-203ENST00000425319 BAALCQ8WXS3 180 aa8.14□□□□□ -1.11
HLA-DQB3-203ENST00000425319 LECT2O14960 151 aa8.13□□□□□ -1.11
HLA-DQB3-203ENST00000425319 SIX6O95475 246 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms