RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 TRMT112Q9UI30 125 aaKnown RBP0.74□□□□□ -2.29
PMS1-210ENST00000424307 LINC00527Q9UJ94 153 aa0.74□□□□□ -2.29
PMS1-210ENST00000424307 HLA-DRB4X5D2U9 266 aa0.74□□□□□ -2.29
PMS1-210ENST00000424307 DSCAML1Q8TD84 2053 aa0.74□□□□□ -2.29
PMS1-210ENST00000424307 SPTBN5Q9NRC6 3674 aaKnown RBP0.74□□□□□ -2.29
PMS1-210ENST00000424307 COL5A1P20908 1838 aaPredicted RBP0.74□□□□□ -2.29
PMS1-210ENST00000424307 DNAJC13O75165 2243 aa0.74□□□□□ -2.29
PMS1-210ENST00000424307 LAMA3Q16787 3333 aa0.74□□□□□ -2.29
PMS1-210ENST00000424307 LAMA2P24043 3122 aaKnown RBP0.73□□□□□ -2.29
PMS1-210ENST00000424307 CFAP47Q6ZTR5 3102 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 OTOGLQ3ZCN5 2332 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 TRAV13-1A0A0B4J241 112 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 TRAV26-2A0A0B4J265 109 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 TRAV41A0A0B4J266 112 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 CPSF4LA6NMK7 179 aaKnown RBP0.73□□□□□ -2.29
PMS1-210ENST00000424307 C8orf87E5RJ46 101 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 ANGPTL7O43827 346 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 CST7O76096 145 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 DPM2O94777 84 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 LEPROTL1O95214 131 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 EPPINO95925 133 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 LTAP01374 205 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 IGKCP01834 107 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 TRACP01848 142 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 GYPBP06028 91 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 MGST1P10620 155 aaKnown RBP0.73□□□□□ -2.29
PMS1-210ENST00000424307 DEFA4P12838 97 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 ZNF823P16415 610 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 IGFBP3P17936 291 aaPredicted RBP0.73□□□□□ -2.29
PMS1-210ENST00000424307 CD24P25063 80 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 ASIPP42127 132 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 RPL34P49207 117 aaKnown RBP0.73□□□□□ -2.29
PMS1-210ENST00000424307 EMDP50402 254 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 SUB1P53999 127 aaKnown RBP eCLIP0.73□□□□□ -2.29
PMS1-210ENST00000424307 TMEM258P61165 79 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 UNC119Q13432 240 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 PMVKQ15126 192 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 C12orf74Q32Q52 190 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 VMA21Q3ZAQ7 101 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 LINC01545Q5VT33 79 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 SFTA2Q6UW10 78 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 ZFP2Q6ZN57 461 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 Q6ZS49 121 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 MRPL55Q7Z7F7 128 aaKnown RBP0.73□□□□□ -2.29
PMS1-210ENST00000424307 C6orf223Q8N319 242 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 TMEM252Q8N6L7 170 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 NUP35Q8NFH5 326 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 OR5C1Q8NGR4 320 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 OR51H1Q8NH63 302 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 OR9G1Q8NH87 305 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 DCANP1Q8TF63 244 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 H1FXQ92522 213 aaKnown RBP0.73□□□□□ -2.29
PMS1-210ENST00000424307 C16orf74Q96GX8 76 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 IGF2BP2-AS1Q96M15 143 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 Q96M85 177 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 GPX7Q96SL4 187 aaPredicted RBP0.73□□□□□ -2.29
PMS1-210ENST00000424307 UPK3BQ9BT76 320 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 DPH3P1Q9H4G8 78 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 ZNF442Q9H7R0 627 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 ZNF702PQ9H963 129 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 IL36BQ9NZH7 164 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 RBM12B-AS1Q9P1G2 102 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 LINC00474Q9P2X8 69 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 AMMECR1Q9Y4X0 333 aaPredicted RBP0.73□□□□□ -2.29
PMS1-210ENST00000424307 THSD7AQ9UPZ6 1657 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 TET2Q6N021 2002 aaPredicted RBP0.73□□□□□ -2.29
PMS1-210ENST00000424307 DCHS1Q96JQ0 3298 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 CDH23Q9H251 3354 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 RP1P56715 2156 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 ZGRF1Q86YA3 2104 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 WDFY4Q6ZS81 3184 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 WDFY3Q8IZQ1 3526 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 REV3LO60673 3130 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 IGKV1D-8A0A087WSZ0 117 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 IGKV2D-26A0A0A0MRZ7 120 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 TRAV17A0A0B4J275 112 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 TRBV7-7A0A0K0K1E9 115 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 LOC100131303A0A0U1RQF7 123 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 C3orf85A0A1B0GTC6 90 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 TCRBV4S1A1TA0A5B7 111 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 C19orf71A6NCJ1 209 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 LOC730098B7Z3J9 87 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 SMKR1H3BMG3 65 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 H3BVH4 76 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 SCRG1O75711 98 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 LYZL6O75951 148 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 ATP5G1P05496 136 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 P0DMU3 169 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 FAM231AP0DMU4 169 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 FAM231CP0DMU5 169 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 COX6A1P12074 109 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 ZNF22P17026 224 aaPredicted RBP0.73□□□□□ -2.29
PMS1-210ENST00000424307 PSMB8P28062 276 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 HLA-DMBP28068 263 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 GCHFRP30047 84 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 PSMB2P49721 201 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 ZNF138P52744 262 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 HERVK_113P61574 105 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 ZNF117Q03924 483 aa0.73□□□□□ -2.29
PMS1-210ENST00000424307 LOXL1Q08397 574 aaPredicted RBP0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms