RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 ZNF747Q9BV97 191 aa10.43□□□□□ -0.74
CDCA3-202ENST00000422785 LAMTOR2Q9Y2Q5 125 aa10.43□□□□□ -0.74
CDCA3-202ENST00000422785 IGHV4-4A0A075B6R2 117 aa10.43□□□□□ -0.74
CDCA3-202ENST00000422785 NCR2O95944 276 aa10.43□□□□□ -0.74
CDCA3-202ENST00000422785 IGLL1P15814 213 aa10.43□□□□□ -0.74
CDCA3-202ENST00000422785 OR8A1Q8NGG7 326 aa10.43□□□□□ -0.74
CDCA3-202ENST00000422785 ZANQ9Y493 2812 aa10.42□□□□□ -0.74
CDCA3-202ENST00000422785 NAV2Q8IVL1 2488 aa10.42□□□□□ -0.74
CDCA3-202ENST00000422785 IGKV3-7A0A075B6H7 116 aa10.42□□□□□ -0.74
CDCA3-202ENST00000422785 A0A096LNJ9 63 aa10.42□□□□□ -0.74
CDCA3-202ENST00000422785 SNAI2O43623 268 aa10.42□□□□□ -0.74
CDCA3-202ENST00000422785 SAMD13Q5VXD3 122 aa10.42□□□□□ -0.74
CDCA3-202ENST00000422785 TRBV7-9A0A0J9YWB2 115 aa10.42□□□□□ -0.74
CDCA3-202ENST00000422785 TIMM8BQ9Y5J9 83 aaPredicted RBP10.42□□□□□ -0.74
CDCA3-202ENST00000422785 TRAV21A0A0B4J279 112 aa10.41□□□□□ -0.74
CDCA3-202ENST00000422785 EDN2P20800 178 aa10.41□□□□□ -0.74
CDCA3-202ENST00000422785 DEFB1P60022 68 aa10.41□□□□□ -0.74
CDCA3-202ENST00000422785 CACNG7P62955 275 aa10.41□□□□□ -0.74
CDCA3-202ENST00000422785 ZNF702PQ9H963 129 aa10.41□□□□□ -0.74
CDCA3-202ENST00000422785 PRRC2AP48634 2157 aaKnown RBP10.41□□□□□ -0.74
CDCA3-202ENST00000422785 ELANEP08246 267 aa10.41□□□□□ -0.74
CDCA3-202ENST00000422785 LINC01545Q5VT33 79 aa10.41□□□□□ -0.74
CDCA3-202ENST00000422785 Q6ZN92 141 aa10.41□□□□□ -0.74
CDCA3-202ENST00000422785 SMIM15Q7Z3B0 74 aa10.41□□□□□ -0.74
CDCA3-202ENST00000422785 APRG1Q8IVJ8 170 aa10.41□□□□□ -0.74
CDCA3-202ENST00000422785 MAP1LC3AQ9H492 121 aa10.41□□□□□ -0.74
CDCA3-202ENST00000422785 ABCA12Q86UK0 2595 aa10.41□□□□□ -0.74
CDCA3-202ENST00000422785 F6UB75 175 aa10.4□□□□□ -0.74
CDCA3-202ENST00000422785 HOXA3O43365 443 aaPredicted RBP10.4□□□□□ -0.74
CDCA3-202ENST00000422785 ID1P41134 155 aa10.4□□□□□ -0.74
CDCA3-202ENST00000422785 MYOZ3Q8TDC0 251 aa10.4□□□□□ -0.74
CDCA3-202ENST00000422785 Q96MF0 132 aa10.4□□□□□ -0.74
CDCA3-202ENST00000422785 VPS25Q9BRG1 176 aa10.4□□□□□ -0.74
CDCA3-202ENST00000422785 LINC01546A6NGU7 62 aa10.4□□□□□ -0.74
CDCA3-202ENST00000422785 J3KRW8 73 aa10.4□□□□□ -0.74
CDCA3-202ENST00000422785 SRD5A1P18405 259 aa10.4□□□□□ -0.74
CDCA3-202ENST00000422785 DCANP1Q8TF63 244 aa10.4□□□□□ -0.74
CDCA3-202ENST00000422785 TNFRSF6BO95407 300 aa10.39□□□□□ -0.75
CDCA3-202ENST00000422785 HBDP02042 147 aa10.39□□□□□ -0.75
CDCA3-202ENST00000422785 EVI2AP22794 236 aa10.39□□□□□ -0.75
CDCA3-202ENST00000422785 SPANXN1Q5VSR9 72 aa10.39□□□□□ -0.75
CDCA3-202ENST00000422785 ST20Q9HBF5 79 aa10.39□□□□□ -0.75
CDCA3-202ENST00000422785 H3BVH4 76 aa10.39□□□□□ -0.75
CDCA3-202ENST00000422785 GAS8-AS1O95177 125 aa10.39□□□□□ -0.75
CDCA3-202ENST00000422785 LGALS1P09382 135 aaKnown RBP10.39□□□□□ -0.75
CDCA3-202ENST00000422785 HNRNPA3P51991 378 aaKnown RBP10.39□□□□□ -0.75
CDCA3-202ENST00000422785 ERASQ7Z444 233 aa10.39□□□□□ -0.75
CDCA3-202ENST00000422785 SELENOKQ9Y6D0 94 aa10.39□□□□□ -0.75
CDCA3-202ENST00000422785 H0Y8G0 127 aa10.38□□□□□ -0.75
CDCA3-202ENST00000422785 KRTAP1-3Q8IUG1 177 aa10.38□□□□□ -0.75
CDCA3-202ENST00000422785 CLUHP3Q96NS8 147 aa10.38□□□□□ -0.75
CDCA3-202ENST00000422785 CHTOPQ9Y3Y2 248 aaKnown RBP10.38□□□□□ -0.75
CDCA3-202ENST00000422785 RNASE4P34096 147 aaKnown RBP10.38□□□□□ -0.75
CDCA3-202ENST00000422785 STPG4Q8N801 248 aa10.38□□□□□ -0.75
CDCA3-202ENST00000422785 RNF152Q8N8N0 203 aa10.38□□□□□ -0.75
CDCA3-202ENST00000422785 NXT2Q9NPJ8 142 aaKnown RBP10.38□□□□□ -0.75
CDCA3-202ENST00000422785 CREBBPQ92793 2442 aa10.38□□□□□ -0.75
CDCA3-202ENST00000422785 HSBP1L1C9JCN9 74 aa10.37□□□□□ -0.75
CDCA3-202ENST00000422785 TMEM238C9JI98 176 aa10.37□□□□□ -0.75
CDCA3-202ENST00000422785 TSPOP30536 169 aa10.37□□□□□ -0.75
CDCA3-202ENST00000422785 UBE2E2Q96LR5 201 aa10.37□□□□□ -0.75
CDCA3-202ENST00000422785 MCRIP2Q9BUT9 160 aaKnown RBP10.37□□□□□ -0.75
CDCA3-202ENST00000422785 LGALS9O00182 355 aa10.37□□□□□ -0.75
CDCA3-202ENST00000422785 MRPS16Q9Y3D3 137 aaKnown RBP10.37□□□□□ -0.75
CDCA3-202ENST00000422785 hDV102S1A0JD36 115 aa10.37□□□□□ -0.75
CDCA3-202ENST00000422785 ASIPP42127 132 aa10.37□□□□□ -0.75
CDCA3-202ENST00000422785 ANXA2RQ3ZCQ2 193 aa10.37□□□□□ -0.75
CDCA3-202ENST00000422785 MS4A6AQ9H2W1 248 aa10.37□□□□□ -0.75
CDCA3-202ENST00000422785 MED14OSP0DP75 135 aa10.36□□□□□ -0.75
CDCA3-202ENST00000422785 GATA1P15976 413 aaPredicted RBP10.36□□□□□ -0.75
CDCA3-202ENST00000422785 WFDC3Q8IUB2 231 aa10.36□□□□□ -0.75
CDCA3-202ENST00000422785 MXRA5Q9NR99 2828 aa10.36□□□□□ -0.75
CDCA3-202ENST00000422785 KLLNB2CW77 178 aa10.36□□□□□ -0.75
CDCA3-202ENST00000422785 FXYD7P58549 80 aa10.36□□□□□ -0.75
CDCA3-202ENST00000422785 COL5A1-AS1Q5SY13 56 aa10.36□□□□□ -0.75
CDCA3-202ENST00000422785 Q8N2B8 174 aa10.36□□□□□ -0.75
CDCA3-202ENST00000422785 OR2K2Q8NGT1 345 aa10.36□□□□□ -0.75
CDCA3-202ENST00000422785 IGHV4OR15-8A0A075B7B6 117 aa10.35□□□□□ -0.75
CDCA3-202ENST00000422785 A0A087WW49 117 aa10.35□□□□□ -0.75
CDCA3-202ENST00000422785 TMEM238LA0A1B0GVL6 79 aa10.35□□□□□ -0.75
CDCA3-202ENST00000422785 CIDEAO60543 219 aa10.35□□□□□ -0.75
CDCA3-202ENST00000422785 S100A4P26447 101 aaKnown RBP10.35□□□□□ -0.75
CDCA3-202ENST00000422785 SYNJ2BPP57105 145 aa10.35□□□□□ -0.75
CDCA3-202ENST00000422785 KIR3DS1Q14943 382 aa10.35□□□□□ -0.75
CDCA3-202ENST00000422785 DEFB125Q8N687 156 aa10.35□□□□□ -0.75
CDCA3-202ENST00000422785 PMCHL2Q9BQD1 86 aa10.35□□□□□ -0.75
CDCA3-202ENST00000422785 Q8N8P6 123 aa10.35□□□□□ -0.75
CDCA3-202ENST00000422785 NRACQ8N912 160 aa10.35□□□□□ -0.75
CDCA3-202ENST00000422785 SCRT2Q9NQ03 307 aa10.35□□□□□ -0.75
CDCA3-202ENST00000422785 HOXD3P31249 432 aaPredicted RBP10.34□□□□□ -0.75
CDCA3-202ENST00000422785 LGALS9BQ3B8N2 356 aa10.34□□□□□ -0.75
CDCA3-202ENST00000422785 LGALS9CQ6DKI2 356 aa10.34□□□□□ -0.75
CDCA3-202ENST00000422785 IGLV2-18A0A075B6J9 118 aa10.34□□□□□ -0.75
CDCA3-202ENST00000422785 FCER1GP30273 86 aa10.34□□□□□ -0.75
CDCA3-202ENST00000422785 IFI27L1Q96BM0 104 aa10.34□□□□□ -0.75
CDCA3-202ENST00000422785 MRAP2Q96G30 205 aa10.34□□□□□ -0.75
CDCA3-202ENST00000422785 PHLDA3Q9Y5J5 127 aa10.34□□□□□ -0.75
CDCA3-202ENST00000422785 TEX15Q9BXT5 2789 aa10.34□□□□□ -0.75
CDCA3-202ENST00000422785 APCP25054 2843 aa10.34□□□□□ -0.75
CDCA3-202ENST00000422785 K7EQG2 157 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms