RNA–Protein interactions for RNA: ENST00000421368.2

MSL3-208, Transcript of MSL complex subunit 3, humanhuman

TSL 5

Gene MSL3, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-208ENST00000421368 CCL20P78556 96 aa12.55□□□□□ -0.4
MSL3-208ENST00000421368 ZNF415Q09FC8 603 aa12.55□□□□□ -0.4
MSL3-208ENST00000421368 SMUG1Q53HV7 270 aa12.55□□□□□ -0.4
MSL3-208ENST00000421368 Q86TA4 180 aa12.55□□□□□ -0.4
MSL3-208ENST00000421368 TCEAL7Q9BRU2 100 aa12.55□□□□□ -0.4
MSL3-208ENST00000421368 MDFICQ9P1T7 246 aa12.55□□□□□ -0.4
MSL3-208ENST00000421368 NACAE9PAV3 2078 aa12.54□□□□□ -0.4
MSL3-208ENST00000421368 TRGV1A0A0A0MS02 117 aa12.54□□□□□ -0.4
MSL3-208ENST00000421368 TRAV1-1A0A0B4J248 108 aa12.54□□□□□ -0.4
MSL3-208ENST00000421368 SAPCD1Q5SSQ6 148 aa12.54□□□□□ -0.4
MSL3-208ENST00000421368 C11orf21Q9P2W6 132 aa12.54□□□□□ -0.4
MSL3-208ENST00000421368 TRGV11A0A075B6L2 103 aa12.53□□□□□ -0.4
MSL3-208ENST00000421368 GNRH2O43555 120 aa12.53□□□□□ -0.4
MSL3-208ENST00000421368 TYMSP04818 313 aa12.52□□□□□ -0.41
MSL3-208ENST00000421368 PFN1P07737 140 aaKnown RBP12.52□□□□□ -0.41
MSL3-208ENST00000421368 FMC1Q96HJ9 113 aa12.52□□□□□ -0.41
MSL3-208ENST00000421368 MRPL16Q9NX20 251 aaKnown RBP12.52□□□□□ -0.41
MSL3-208ENST00000421368 TRGV2A0A075B6R0 118 aa12.51□□□□□ -0.41
MSL3-208ENST00000421368 IGHV3-16A0A0C4DH30 117 aa12.51□□□□□ -0.41
MSL3-208ENST00000421368 TRBV6-1A0A0K0K1D8 114 aa12.51□□□□□ -0.41
MSL3-208ENST00000421368 SCO2A0A1W2PP80 73 aa12.51□□□□□ -0.41
MSL3-208ENST00000421368 HOXA5P20719 270 aa12.51□□□□□ -0.41
MSL3-208ENST00000421368 AKR1C3P42330 323 aa12.51□□□□□ -0.41
MSL3-208ENST00000421368 UBE2G1P62253 170 aa12.51□□□□□ -0.41
MSL3-208ENST00000421368 LGALS9BQ3B8N2 356 aa12.51□□□□□ -0.41
MSL3-208ENST00000421368 KCNS1Q96KK3 526 aa12.51□□□□□ -0.41
MSL3-208ENST00000421368 C18orf15Q96N68 181 aa12.51□□□□□ -0.41
MSL3-208ENST00000421368 SDF2L1Q9HCN8 221 aa12.51□□□□□ -0.41
MSL3-208ENST00000421368 MANBALQ9NQG1 85 aa12.51□□□□□ -0.41
MSL3-208ENST00000421368 GNG13Q9P2W3 67 aa12.51□□□□□ -0.41
MSL3-208ENST00000421368 SPXQ9BT56 116 aa12.5□□□□□ -0.41
MSL3-208ENST00000421368 ZFP30Q9Y2G7 519 aa12.5□□□□□ -0.41
MSL3-208ENST00000421368 BOLA1Q9Y3E2 137 aa12.5□□□□□ -0.41
MSL3-208ENST00000421368 TEX46H3BTG2 121 aa12.49□□□□□ -0.41
MSL3-208ENST00000421368 LTAP01374 205 aa12.49□□□□□ -0.41
MSL3-208ENST00000421368 OR5I1Q13606 314 aa12.49□□□□□ -0.41
MSL3-208ENST00000421368 ALKAL2Q6UX46 152 aa12.49□□□□□ -0.41
MSL3-208ENST00000421368 COX8CQ7Z4L0 72 aa12.49□□□□□ -0.41
MSL3-208ENST00000421368 C15orf53Q8NAA6 179 aa12.49□□□□□ -0.41
MSL3-208ENST00000421368 ZC2HC1AQ96GY0 325 aa12.49□□□□□ -0.41
MSL3-208ENST00000421368 P0DMU3 169 aa12.48□□□□□ -0.41
MSL3-208ENST00000421368 FAM231AP0DMU4 169 aa12.48□□□□□ -0.41
MSL3-208ENST00000421368 FAM231CP0DMU5 169 aa12.48□□□□□ -0.41
MSL3-208ENST00000421368 CRIP1P50238 77 aa12.48□□□□□ -0.41
MSL3-208ENST00000421368 DNAH10Q8IVF4 4471 aa12.47□□□□□ -0.41
MSL3-208ENST00000421368 TRAV26-1A0A087WT03 109 aa12.47□□□□□ -0.41
MSL3-208ENST00000421368 FABP5P3A8MUU1 101 aa12.47□□□□□ -0.41
MSL3-208ENST00000421368 RASL10AQ92737 203 aa12.47□□□□□ -0.41
MSL3-208ENST00000421368 IGKV3D-20A0A0C4DH25 116 aa12.46□□□□□ -0.41
MSL3-208ENST00000421368 S100A9P06702 114 aaKnown RBP12.46□□□□□ -0.41
MSL3-208ENST00000421368 A0A0J9YY99 117 aa12.45□□□□□ -0.42
MSL3-208ENST00000421368 M0R2P5 195 aa12.45□□□□□ -0.42
MSL3-208ENST00000421368 SH2D1AO60880 128 aa12.45□□□□□ -0.42
MSL3-208ENST00000421368 NUDT3O95989 172 aa12.45□□□□□ -0.42
MSL3-208ENST00000421368 IGHV3-53P01767 116 aa12.45□□□□□ -0.42
MSL3-208ENST00000421368 POM121L12Q8N7R1 296 aa12.45□□□□□ -0.42
MSL3-208ENST00000421368 NHLRC2Q8NBF2 726 aa12.45□□□□□ -0.42
MSL3-208ENST00000421368 C11orf52Q96A22 123 aa12.45□□□□□ -0.42
MSL3-208ENST00000421368 ZNF674Q2M3X9 581 aa12.44□□□□□ -0.42
MSL3-208ENST00000421368 FAM162BQ5T6X4 162 aa12.44□□□□□ -0.42
MSL3-208ENST00000421368 C9orf85Q96MD7 179 aa12.44□□□□□ -0.42
MSL3-208ENST00000421368 TXNDC17Q9BRA2 123 aa12.44□□□□□ -0.42
MSL3-208ENST00000421368 IFNA1P01562 189 aa12.43□□□□□ -0.42
MSL3-208ENST00000421368 BCL2P10415 239 aa12.43□□□□□ -0.42
MSL3-208ENST00000421368 RNASE3P12724 160 aaKnown RBP12.43□□□□□ -0.42
MSL3-208ENST00000421368 MEF2BQ02080 365 aaPredicted RBP12.43□□□□□ -0.42
MSL3-208ENST00000421368 VSIG2Q96IQ7 327 aa12.43□□□□□ -0.42
MSL3-208ENST00000421368 DERL1Q9BUN8 251 aa12.43□□□□□ -0.42
MSL3-208ENST00000421368 B4DEV8 164 aa12.42□□□□□ -0.42
MSL3-208ENST00000421368 ORM1P02763 201 aa12.42□□□□□ -0.42
MSL3-208ENST00000421368 SFTA3P0C7M3 94 aa12.42□□□□□ -0.42
MSL3-208ENST00000421368 RPL35P42766 123 aaKnown RBP12.42□□□□□ -0.42
MSL3-208ENST00000421368 BLOC1S1P78537 153 aa12.42□□□□□ -0.42
MSL3-208ENST00000421368 FHL2Q14192 279 aa12.42□□□□□ -0.42
MSL3-208ENST00000421368 BAGE2Q86Y30 109 aa12.42□□□□□ -0.42
MSL3-208ENST00000421368 UBE2DNLQ8IWF7 75 aa12.42□□□□□ -0.42
MSL3-208ENST00000421368 ZNF479Q96JC4 524 aa12.42□□□□□ -0.42
MSL3-208ENST00000421368 MLST8Q9BVC4 326 aa12.42□□□□□ -0.42
MSL3-208ENST00000421368 KRBOX1C9JBD0 128 aa12.41□□□□□ -0.42
MSL3-208ENST00000421368 H3BNG1 76 aa12.41□□□□□ -0.42
MSL3-208ENST00000421368 M0R036 132 aa12.41□□□□□ -0.42
MSL3-208ENST00000421368 RNF212Q495C1 297 aa12.41□□□□□ -0.42
MSL3-208ENST00000421368 FRAS1Q86XX4 4008 aa12.4□□□□□ -0.42
MSL3-208ENST00000421368 TRAV4A0A0B4J268 109 aa12.4□□□□□ -0.42
MSL3-208ENST00000421368 C9JCJ5 164 aa12.4□□□□□ -0.42
MSL3-208ENST00000421368 LINC01559Q495D7 138 aa12.4□□□□□ -0.42
MSL3-208ENST00000421368 ZNF575Q86XF7 245 aa12.4□□□□□ -0.42
MSL3-208ENST00000421368 LYPD6BQ8NI32 183 aa12.4□□□□□ -0.42
MSL3-208ENST00000421368 VAX2Q9UIW0 290 aa12.4□□□□□ -0.42
MSL3-208ENST00000421368 DNAH2Q9P225 4427 aa12.4□□□□□ -0.42
MSL3-208ENST00000421368 PGPEP1LA6NFU8 196 aa12.39□□□□□ -0.43
MSL3-208ENST00000421368 PDE6DO43924 150 aa12.39□□□□□ -0.43
MSL3-208ENST00000421368 S100A4P26447 101 aaKnown RBP12.39□□□□□ -0.43
MSL3-208ENST00000421368 ASIPP42127 132 aa12.39□□□□□ -0.43
MSL3-208ENST00000421368 ZNF876PQ49A33 203 aa12.39□□□□□ -0.43
MSL3-208ENST00000421368 ZNF506Q5JVG8 444 aa12.39□□□□□ -0.43
MSL3-208ENST00000421368 DNLZQ5SXM8 178 aa12.39□□□□□ -0.43
MSL3-208ENST00000421368 OR4C5Q8NGB2 326 aa12.39□□□□□ -0.43
MSL3-208ENST00000421368 PRO0255Q9UI72 69 aa12.39□□□□□ -0.43
MSL3-208ENST00000421368 TRGV4A0A0C4DH28 118 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms