RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 RAB2AP61019 212 aa12.8□□□□□ -0.36
VARS2-202ENST00000421263 OR4C5Q8NGB2 326 aa12.8□□□□□ -0.36
VARS2-202ENST00000421263 PCNPQ8WW12 178 aaKnown RBP12.8□□□□□ -0.36
VARS2-202ENST00000421263 TREM1Q9NP99 234 aa12.8□□□□□ -0.36
VARS2-202ENST00000421263 NAGKQ9UJ70 344 aa12.8□□□□□ -0.36
VARS2-202ENST00000421263 A0A087WTM6 91 aa12.79□□□□□ -0.36
VARS2-202ENST00000421263 TRAV8-1A0A0A6YYK1 113 aa12.79□□□□□ -0.36
VARS2-202ENST00000421263 C9JCJ5 164 aa12.79□□□□□ -0.36
VARS2-202ENST00000421263 OR10G9Q8NGN4 311 aa12.79□□□□□ -0.36
VARS2-202ENST00000421263 OR10G7Q8NGN6 311 aa12.79□□□□□ -0.36
VARS2-202ENST00000421263 SUN5Q8TC36 379 aa12.79□□□□□ -0.36
VARS2-202ENST00000421263 KCNS1Q96KK3 526 aa12.79□□□□□ -0.36
VARS2-202ENST00000421263 TXNDC17Q9BRA2 123 aa12.79□□□□□ -0.36
VARS2-202ENST00000421263 MSRB1Q9NZV6 116 aa12.79□□□□□ -0.36
VARS2-202ENST00000421263 RPH3ALQ9UNE2 315 aa12.79□□□□□ -0.36
VARS2-202ENST00000421263 EVI2AP22794 236 aa12.78□□□□□ -0.36
VARS2-202ENST00000421263 FUSP35637 526 aaKnown RBP eCLIP12.78□□□□□ -0.36
VARS2-202ENST00000421263 TIRAPP58753 221 aa12.78□□□□□ -0.36
VARS2-202ENST00000421263 F6UZH7 168 aa12.77□□□□□ -0.37
VARS2-202ENST00000421263 HMGB3O15347 200 aaKnown RBP12.77□□□□□ -0.37
VARS2-202ENST00000421263 STAG3L2P0CL84 134 aa12.77□□□□□ -0.37
VARS2-202ENST00000421263 STAG3L3P0CL85 134 aa12.77□□□□□ -0.37
VARS2-202ENST00000421263 XGP55808 180 aa12.77□□□□□ -0.37
VARS2-202ENST00000421263 GNG5P63218 68 aa12.77□□□□□ -0.37
VARS2-202ENST00000421263 SH2D6Q7Z4S9 175 aa12.77□□□□□ -0.37
VARS2-202ENST00000421263 OR2G3Q8NGZ4 309 aa12.77□□□□□ -0.37
VARS2-202ENST00000421263 SDF2L1Q9HCN8 221 aa12.77□□□□□ -0.37
VARS2-202ENST00000421263 LOC100131303A0A0U1RQF7 123 aa12.76□□□□□ -0.37
VARS2-202ENST00000421263 SERTM2A0A1B0GWG4 89 aa12.76□□□□□ -0.37
VARS2-202ENST00000421263 GATA1P15976 413 aaPredicted RBP12.76□□□□□ -0.37
VARS2-202ENST00000421263 ARL14EPLP0DKL9 152 aa12.75□□□□□ -0.37
VARS2-202ENST00000421263 ZNF80P51504 273 aaPredicted RBP12.75□□□□□ -0.37
VARS2-202ENST00000421263 ASB13Q8WXK3 278 aa12.75□□□□□ -0.37
VARS2-202ENST00000421263 C11orf21Q9P2W6 132 aa12.75□□□□□ -0.37
VARS2-202ENST00000421263 CIDEAO60543 219 aa12.74□□□□□ -0.37
VARS2-202ENST00000421263 TCRAP04437 139 aa12.74□□□□□ -0.37
VARS2-202ENST00000421263 CDC34P49427 236 aaPredicted RBP12.74□□□□□ -0.37
VARS2-202ENST00000421263 C10orf126Q8N4M7 172 aa12.74□□□□□ -0.37
VARS2-202ENST00000421263 RAB24Q969Q5 203 aa12.74□□□□□ -0.37
VARS2-202ENST00000421263 SGK494Q96LW2 274 aa12.74□□□□□ -0.37
VARS2-202ENST00000421263 PSMG3Q9BT73 122 aaPredicted RBP12.74□□□□□ -0.37
VARS2-202ENST00000421263 IGLV2-11P01706 119 aa12.73□□□□□ -0.37
VARS2-202ENST00000421263 CRYGDP07320 174 aa12.73□□□□□ -0.37
VARS2-202ENST00000421263 KRTAP10-1P60331 282 aa12.73□□□□□ -0.37
VARS2-202ENST00000421263 C5orf17Q8NAS9 161 aa12.73□□□□□ -0.37
VARS2-202ENST00000421263 PTH2Q96A98 100 aa12.73□□□□□ -0.37
VARS2-202ENST00000421263 AQP10Q96PS8 301 aa12.73□□□□□ -0.37
VARS2-202ENST00000421263 ALG5Q9Y673 324 aa12.73□□□□□ -0.37
VARS2-202ENST00000421263 HERC1Q15751 4861 aa12.72□□□□□ -0.37
VARS2-202ENST00000421263 TAAR5O14804 337 aa12.72□□□□□ -0.37
VARS2-202ENST00000421263 RS1O15537 224 aa12.72□□□□□ -0.37
VARS2-202ENST00000421263 GCHFRP30047 84 aa12.72□□□□□ -0.37
VARS2-202ENST00000421263 SERF2P84101 59 aa12.72□□□□□ -0.37
VARS2-202ENST00000421263 ZNF876PQ49A33 203 aa12.72□□□□□ -0.37
VARS2-202ENST00000421263 CFAP126Q5VTH2 177 aa12.72□□□□□ -0.37
VARS2-202ENST00000421263 DPPA3Q6W0C5 159 aa12.72□□□□□ -0.37
VARS2-202ENST00000421263 SLC25A29Q8N8R3 303 aa12.72□□□□□ -0.37
VARS2-202ENST00000421263 HSD17B11Q8NBQ5 300 aa12.72□□□□□ -0.37
VARS2-202ENST00000421263 C9orf85Q96MD7 179 aa12.72□□□□□ -0.37
VARS2-202ENST00000421263 NDFIP1Q9BT67 221 aa12.72□□□□□ -0.37
VARS2-202ENST00000421263 PSG8Q9UQ74 426 aa12.72□□□□□ -0.37
VARS2-202ENST00000421263 IGHV3-38A0A0C4DH36 116 aa12.71□□□□□ -0.37
VARS2-202ENST00000421263 TRBV6-4A0A1B0GX49 114 aa12.71□□□□□ -0.37
VARS2-202ENST00000421263 FBLL1A6NHQ2 334 aaKnown RBP12.71□□□□□ -0.37
VARS2-202ENST00000421263 EPM2AB3EWF7 344 aa12.71□□□□□ -0.37
VARS2-202ENST00000421263 PFN1P07737 140 aaKnown RBP12.71□□□□□ -0.37
VARS2-202ENST00000421263 ATP6V0CP27449 155 aa12.71□□□□□ -0.37
VARS2-202ENST00000421263 SUMO1P63165 101 aaKnown RBP12.71□□□□□ -0.37
VARS2-202ENST00000421263 LINC01556Q5JQF7 62 aa12.71□□□□□ -0.37
VARS2-202ENST00000421263 EPDR1Q9UM22 224 aa12.71□□□□□ -0.37
VARS2-202ENST00000421263 K7EQM0 130 aa12.7□□□□□ -0.38
VARS2-202ENST00000421263 GCGP01275 180 aa12.7□□□□□ -0.38
VARS2-202ENST00000421263 MBP02144 154 aa12.7□□□□□ -0.38
VARS2-202ENST00000421263 NHLRC2Q8NBF2 726 aa12.7□□□□□ -0.38
VARS2-202ENST00000421263 BATF3Q9NR55 127 aa12.7□□□□□ -0.38
VARS2-202ENST00000421263 LRCOL1A6NCL2 159 aa12.69□□□□□ -0.38
VARS2-202ENST00000421263 IBA57-AS1B1ANH7 110 aa12.69□□□□□ -0.38
VARS2-202ENST00000421263 GGTLC3B5MD39 225 aa12.69□□□□□ -0.38
VARS2-202ENST00000421263 RNASE3P12724 160 aaKnown RBP12.69□□□□□ -0.38
VARS2-202ENST00000421263 FLI1Q01543 452 aaPredicted RBP12.69□□□□□ -0.38
VARS2-202ENST00000421263 TMEM167BQ9NRX6 74 aa12.69□□□□□ -0.38
VARS2-202ENST00000421263 TNFSF18Q9UNG2 199 aa12.69□□□□□ -0.38
VARS2-202ENST00000421263 BOLA1Q9Y3E2 137 aa12.69□□□□□ -0.38
VARS2-202ENST00000421263 VPS13BQ7Z7G8 4022 aa12.68□□□□□ -0.38
VARS2-202ENST00000421263 PGPEP1LA6NFU8 196 aa12.68□□□□□ -0.38
VARS2-202ENST00000421263 CXorf1O96002 111 aa12.68□□□□□ -0.38
VARS2-202ENST00000421263 PPT1P50897 306 aa12.68□□□□□ -0.38
VARS2-202ENST00000421263 RHOHQ15669 191 aa12.68□□□□□ -0.38
VARS2-202ENST00000421263 SMUG1Q53HV7 270 aa12.68□□□□□ -0.38
VARS2-202ENST00000421263 Q5BKY6 102 aa12.68□□□□□ -0.38
VARS2-202ENST00000421263 TMEM75Q8N9X5 138 aa12.68□□□□□ -0.38
VARS2-202ENST00000421263 PRADC1Q9BSG0 188 aa12.68□□□□□ -0.38
VARS2-202ENST00000421263 DNAH8Q96JB1 4490 aa12.68□□□□□ -0.38
VARS2-202ENST00000421263 GCSHP23434 173 aa12.67□□□□□ -0.38
VARS2-202ENST00000421263 ZNF506Q5JVG8 444 aa12.67□□□□□ -0.38
VARS2-202ENST00000421263 SAPCD1Q5SSQ6 148 aa12.67□□□□□ -0.38
VARS2-202ENST00000421263 CYB561D1Q8N8Q1 229 aa12.67□□□□□ -0.38
VARS2-202ENST00000421263 ACTR3CQ9C0K3 210 aaPredicted RBP12.67□□□□□ -0.38
VARS2-202ENST00000421263 TRAV8-6A0A0B4J262 113 aa12.66□□□□□ -0.38
VARS2-202ENST00000421263 A0A1W2PRE2 83 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms