RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 ZNF462Q96JM2 2506 aa8.39□□□□□ -1.07
PTCH1-206ENST00000421141 COL27A1Q8IZC6 1860 aaPredicted RBP8.39□□□□□ -1.07
PTCH1-206ENST00000421141 PGPEP1Q9NXJ5 209 aa8.39□□□□□ -1.07
PTCH1-206ENST00000421141 LENEPQ9Y5L5 61 aa8.39□□□□□ -1.07
PTCH1-206ENST00000421141 LINC00479Q96M42 142 aa8.38□□□□□ -1.07
PTCH1-206ENST00000421141 MSMPQ1L6U9 139 aa8.38□□□□□ -1.07
PTCH1-206ENST00000421141 K7EMT4 169 aa8.38□□□□□ -1.07
PTCH1-206ENST00000421141 CGB7P0DN87 165 aa8.38□□□□□ -1.07
PTCH1-206ENST00000421141 ANXA2RQ3ZCQ2 193 aa8.38□□□□□ -1.07
PTCH1-206ENST00000421141 C10orf142B7Z368 130 aa8.38□□□□□ -1.07
PTCH1-206ENST00000421141 CT83Q5H943 113 aa8.38□□□□□ -1.07
PTCH1-206ENST00000421141 LY6G5BQ8NDX9 201 aa8.38□□□□□ -1.07
PTCH1-206ENST00000421141 JMJD1CQ15652 2540 aa8.38□□□□□ -1.07
PTCH1-206ENST00000421141 PRSS46E5RG02 174 aa8.38□□□□□ -1.07
PTCH1-206ENST00000421141 COL5A1-AS1Q5SY13 56 aa8.38□□□□□ -1.07
PTCH1-206ENST00000421141 TMEM170AQ8WVE7 144 aa8.38□□□□□ -1.07
PTCH1-206ENST00000421141 SCGB1A1P11684 91 aa8.37□□□□□ -1.07
PTCH1-206ENST00000421141 IFITM2Q01629 132 aa8.37□□□□□ -1.07
PTCH1-206ENST00000421141 ZNRF2Q8NHG8 242 aa8.37□□□□□ -1.07
PTCH1-206ENST00000421141 ANGP03950 147 aaKnown RBP8.37□□□□□ -1.07
PTCH1-206ENST00000421141 SRSF3P84103 164 aaKnown RBP8.37□□□□□ -1.07
PTCH1-206ENST00000421141 ZNF492Q9P255 531 aa8.37□□□□□ -1.07
PTCH1-206ENST00000421141 GGTLC3B5MD39 225 aa8.37□□□□□ -1.07
PTCH1-206ENST00000421141 K7EIM0 57 aa8.37□□□□□ -1.07
PTCH1-206ENST00000421141 SERF1AO75920 110 aa8.37□□□□□ -1.07
PTCH1-206ENST00000421141 FXYD5Q96DB9 178 aa8.37□□□□□ -1.07
PTCH1-206ENST00000421141 I3L2K1 104 aa8.37□□□□□ -1.07
PTCH1-206ENST00000421141 DEFB104AQ8WTQ1 72 aa8.37□□□□□ -1.07
PTCH1-206ENST00000421141 PLEKHB2Q96CS7 222 aa8.37□□□□□ -1.07
PTCH1-206ENST00000421141 LURAP1LQ8IV03 231 aa8.36□□□□□ -1.07
PTCH1-206ENST00000421141 AMN1Q8IY45 258 aa8.36□□□□□ -1.07
PTCH1-206ENST00000421141 MBD6Q96DN6 1003 aa8.36□□□□□ -1.07
PTCH1-206ENST00000421141 C16orf54Q6UWD8 224 aa8.36□□□□□ -1.07
PTCH1-206ENST00000421141 U3KQE9 123 aa8.36□□□□□ -1.07
PTCH1-206ENST00000421141 DOPEY1Q5JWR5 2465 aa8.36□□□□□ -1.07
PTCH1-206ENST00000421141 IGHV1-24A0A0C4DH33 117 aa8.36□□□□□ -1.07
PTCH1-206ENST00000421141 FAM231BA6NCW3 169 aa8.36□□□□□ -1.07
PTCH1-206ENST00000421141 TMEM238C9JI98 176 aa8.36□□□□□ -1.07
PTCH1-206ENST00000421141 PRRC2CQ9Y520 2896 aaKnown RBP8.36□□□□□ -1.07
PTCH1-206ENST00000421141 ICOSQ9Y6W8 199 aa8.36□□□□□ -1.07
PTCH1-206ENST00000421141 CRYGCP07315 174 aa8.36□□□□□ -1.07
PTCH1-206ENST00000421141 ZNF493Q6ZR52 646 aa8.35□□□□□ -1.07
PTCH1-206ENST00000421141 GSN-AS1Q9NRJ2 163 aa8.35□□□□□ -1.07
PTCH1-206ENST00000421141 ODF3BA8MYP8 253 aa8.35□□□□□ -1.07
PTCH1-206ENST00000421141 MRPL23Q16540 153 aaKnown RBP8.35□□□□□ -1.07
PTCH1-206ENST00000421141 FNDC4Q9H6D8 234 aaPredicted RBP8.35□□□□□ -1.07
PTCH1-206ENST00000421141 TRAV2A0A0B4J234 112 aa8.35□□□□□ -1.07
PTCH1-206ENST00000421141 ZNF815PA8K554 130 aa8.35□□□□□ -1.07
PTCH1-206ENST00000421141 A0A096LPF7 62 aa8.35□□□□□ -1.07
PTCH1-206ENST00000421141 C22orf34Q6ZV56 151 aa8.35□□□□□ -1.07
PTCH1-206ENST00000421141 IGHG4P01861 327 aa8.34□□□□□ -1.07
PTCH1-206ENST00000421141 GAGE6Q13070 117 aa8.34□□□□□ -1.07
PTCH1-206ENST00000421141 A0A0J9YY99 117 aa8.34□□□□□ -1.07
PTCH1-206ENST00000421141 ODF3L1Q8IXM7 274 aa8.34□□□□□ -1.07
PTCH1-206ENST00000421141 GAGE10A6NGK3 116 aa8.34□□□□□ -1.07
PTCH1-206ENST00000421141 UBE2CO00762 179 aa8.34□□□□□ -1.07
PTCH1-206ENST00000421141 CTSGP08311 255 aa8.34□□□□□ -1.07
PTCH1-206ENST00000421141 IGLV2-23P01705 113 aa8.34□□□□□ -1.07
PTCH1-206ENST00000421141 DEFB135Q30KP9 77 aa8.34□□□□□ -1.07
PTCH1-206ENST00000421141 A0A0U1RRA0 63 aa8.34□□□□□ -1.07
PTCH1-206ENST00000421141 SMKR1H3BMG3 65 aa8.34□□□□□ -1.07
PTCH1-206ENST00000421141 LEPROTO15243 131 aa8.33□□□□□ -1.08
PTCH1-206ENST00000421141 TNFRSF6BO95407 300 aa8.33□□□□□ -1.08
PTCH1-206ENST00000421141 IGKV2D-24A0A075B6R9 120 aa8.33□□□□□ -1.08
PTCH1-206ENST00000421141 DYNAPQ8N1N2 210 aa8.33□□□□□ -1.08
PTCH1-206ENST00000421141 SPRY2O43597 315 aa8.33□□□□□ -1.08
PTCH1-206ENST00000421141 CDK2AP2O75956 126 aa8.33□□□□□ -1.08
PTCH1-206ENST00000421141 TIMM21Q9BVV7 248 aa8.33□□□□□ -1.08
PTCH1-206ENST00000421141 BUB3O43684 328 aa8.33□□□□□ -1.08
PTCH1-206ENST00000421141 NKAPP1Q8N9T2 125 aa8.33□□□□□ -1.08
PTCH1-206ENST00000421141 TMEM141Q96I45 108 aa8.33□□□□□ -1.08
PTCH1-206ENST00000421141 CRLF1O75462 422 aa8.33□□□□□ -1.08
PTCH1-206ENST00000421141 ATP5G1P05496 136 aa8.33□□□□□ -1.08
PTCH1-206ENST00000421141 MYMXA0A1B0GTQ4 84 aa8.33□□□□□ -1.08
PTCH1-206ENST00000421141 F8W735 103 aaPredicted RBP8.33□□□□□ -1.08
PTCH1-206ENST00000421141 USP9XQ93008 2570 aaPredicted RBP8.32□□□□□ -1.08
PTCH1-206ENST00000421141 LINC00574Q9H8X3 128 aa8.32□□□□□ -1.08
PTCH1-206ENST00000421141 TEX22C9J3V5 150 aa8.32□□□□□ -1.08
PTCH1-206ENST00000421141 F6UB75 175 aa8.32□□□□□ -1.08
PTCH1-206ENST00000421141 ZC2HC1AQ96GY0 325 aa8.32□□□□□ -1.08
PTCH1-206ENST00000421141 C14orf144Q96I85 54 aa8.32□□□□□ -1.08
PTCH1-206ENST00000421141 SDHAF1A6NFY7 115 aa8.31□□□□□ -1.08
PTCH1-206ENST00000421141 PRR31Q5SQ13 230 aa8.31□□□□□ -1.08
PTCH1-206ENST00000421141 PRIMA1Q86XR5 153 aa8.31□□□□□ -1.08
PTCH1-206ENST00000421141 TRBV24-1A0A075B6N3 115 aa8.31□□□□□ -1.08
PTCH1-206ENST00000421141 GYPEP15421 78 aa8.31□□□□□ -1.08
PTCH1-206ENST00000421141 TP53TG1Q9Y2A0 90 aa8.31□□□□□ -1.08
PTCH1-206ENST00000421141 Q9HAA7 133 aa8.31□□□□□ -1.08
PTCH1-206ENST00000421141 HLA-DRB4P13762 266 aa8.31□□□□□ -1.08
PTCH1-206ENST00000421141 C1orf43Q9BWL3 253 aa8.31□□□□□ -1.08
PTCH1-206ENST00000421141 HLA-DRB4X5D2U9 266 aa8.31□□□□□ -1.08
PTCH1-206ENST00000421141 IGHV3-38A0A0C4DH36 116 aa8.3□□□□□ -1.08
PTCH1-206ENST00000421141 DAZ2Q13117 558 aaKnown RBP8.3□□□□□ -1.08
PTCH1-206ENST00000421141 DAZ4Q86SG3 579 aaKnown RBP8.3□□□□□ -1.08
PTCH1-206ENST00000421141 ZNF48Q96MX3 618 aaPredicted RBP8.3□□□□□ -1.08
PTCH1-206ENST00000421141 DAZ3Q9NR90 486 aaKnown RBP8.3□□□□□ -1.08
PTCH1-206ENST00000421141 VWC2LB2RUY7 222 aa8.3□□□□□ -1.08
PTCH1-206ENST00000421141 F8WEM9 126 aa8.3□□□□□ -1.08
PTCH1-206ENST00000421141 SNAI2O43623 268 aa8.3□□□□□ -1.08
PTCH1-206ENST00000421141 IGF1P05019 195 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms