RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 GNRH2O43555 120 aa11.71□□□□□ -0.53
PTCD1-202ENST00000419981 GOLT1AQ6ZVE7 132 aa11.71□□□□□ -0.53
PTCD1-202ENST00000419981 ARL6IP6Q8N6S5 226 aa11.71□□□□□ -0.53
PTCD1-202ENST00000419981 IGHV3-16A0A0C4DH30 117 aa11.7□□□□□ -0.54
PTCD1-202ENST00000419981 F6UZH7 168 aa11.7□□□□□ -0.54
PTCD1-202ENST00000419981 TYMSP04818 313 aa11.7□□□□□ -0.54
PTCD1-202ENST00000419981 C10orf126Q8N4M7 172 aa11.7□□□□□ -0.54
PTCD1-202ENST00000419981 SDF2L1Q9HCN8 221 aa11.7□□□□□ -0.54
PTCD1-202ENST00000419981 TRAV8-1A0A0A6YYK1 113 aa11.69□□□□□ -0.54
PTCD1-202ENST00000419981 CRYGDP07320 174 aa11.69□□□□□ -0.54
PTCD1-202ENST00000419981 SH2D6Q7Z4S9 175 aa11.69□□□□□ -0.54
PTCD1-202ENST00000419981 NHLRC2Q8NBF2 726 aa11.69□□□□□ -0.54
PTCD1-202ENST00000419981 KCNS1Q96KK3 526 aa11.69□□□□□ -0.54
PTCD1-202ENST00000419981 TREM1Q9NP99 234 aa11.69□□□□□ -0.54
PTCD1-202ENST00000419981 LOC100131303A0A0U1RQF7 123 aa11.68□□□□□ -0.54
PTCD1-202ENST00000419981 XGP55808 180 aa11.68□□□□□ -0.54
PTCD1-202ENST00000419981 RAB2AP61019 212 aa11.68□□□□□ -0.54
PTCD1-202ENST00000419981 GNG5P63218 68 aa11.68□□□□□ -0.54
PTCD1-202ENST00000419981 TVP23CQ96ET8 276 aa11.68□□□□□ -0.54
PTCD1-202ENST00000419981 WFDC1Q9HC57 220 aa11.68□□□□□ -0.54
PTCD1-202ENST00000419981 HMGB3O15347 200 aaKnown RBP11.67□□□□□ -0.54
PTCD1-202ENST00000419981 GATA1P15976 413 aaPredicted RBP11.67□□□□□ -0.54
PTCD1-202ENST00000419981 PPT1P50897 306 aa11.67□□□□□ -0.54
PTCD1-202ENST00000419981 DEFA1P59665 94 aa11.67□□□□□ -0.54
PTCD1-202ENST00000419981 DEFA3P59666 94 aa11.67□□□□□ -0.54
PTCD1-202ENST00000419981 KRTAP10-1P60331 282 aa11.67□□□□□ -0.54
PTCD1-202ENST00000419981 OR10G9Q8NGN4 311 aa11.67□□□□□ -0.54
PTCD1-202ENST00000419981 OR10G7Q8NGN6 311 aa11.67□□□□□ -0.54
PTCD1-202ENST00000419981 ASB13Q8WXK3 278 aa11.67□□□□□ -0.54
PTCD1-202ENST00000419981 NDFIP1Q9BT67 221 aa11.67□□□□□ -0.54
PTCD1-202ENST00000419981 FBLL1A6NHQ2 334 aaKnown RBP11.66□□□□□ -0.54
PTCD1-202ENST00000419981 TIRAPP58753 221 aa11.66□□□□□ -0.54
PTCD1-202ENST00000419981 IGHV3-38A0A0C4DH36 116 aa11.65□□□□□ -0.54
PTCD1-202ENST00000419981 SERTM2A0A1B0GWG4 89 aa11.65□□□□□ -0.54
PTCD1-202ENST00000419981 ARL14EPLP0DKL9 152 aa11.65□□□□□ -0.54
PTCD1-202ENST00000419981 FRZBQ92765 325 aa11.65□□□□□ -0.54
PTCD1-202ENST00000419981 PSCAO43653 123 aa11.64□□□□□ -0.55
PTCD1-202ENST00000419981 GCSHP23434 173 aa11.64□□□□□ -0.55
PTCD1-202ENST00000419981 CDC34P49427 236 aaPredicted RBP11.64□□□□□ -0.55
PTCD1-202ENST00000419981 Q5VSD8 79 aa11.64□□□□□ -0.55
PTCD1-202ENST00000419981 SGK494Q96LW2 274 aa11.64□□□□□ -0.55
PTCD1-202ENST00000419981 TRAV8-6A0A0B4J262 113 aa11.63□□□□□ -0.55
PTCD1-202ENST00000419981 K7EQM0 130 aa11.63□□□□□ -0.55
PTCD1-202ENST00000419981 INAFM2P0DMQ5 153 aa11.63□□□□□ -0.55
PTCD1-202ENST00000419981 ZNF876PQ49A33 203 aa11.63□□□□□ -0.55
PTCD1-202ENST00000419981 LINC01556Q5JQF7 62 aa11.63□□□□□ -0.55
PTCD1-202ENST00000419981 SLC25A29Q8N8R3 303 aa11.63□□□□□ -0.55
PTCD1-202ENST00000419981 C5orf17Q8NAS9 161 aa11.63□□□□□ -0.55
PTCD1-202ENST00000419981 PRADC1Q9BSG0 188 aa11.63□□□□□ -0.55
PTCD1-202ENST00000419981 BOLA1Q9Y3E2 137 aa11.63□□□□□ -0.55
PTCD1-202ENST00000419981 CIDEAO60543 219 aa11.62□□□□□ -0.55
PTCD1-202ENST00000419981 TCRAP04437 139 aa11.62□□□□□ -0.55
PTCD1-202ENST00000419981 PFN1P07737 140 aaKnown RBP11.62□□□□□ -0.55
PTCD1-202ENST00000419981 STAG3L2P0CL84 134 aa11.62□□□□□ -0.55
PTCD1-202ENST00000419981 STAG3L3P0CL85 134 aa11.62□□□□□ -0.55
PTCD1-202ENST00000419981 RHOHQ15669 191 aa11.62□□□□□ -0.55
PTCD1-202ENST00000419981 OR10J3Q5JRS4 329 aa11.62□□□□□ -0.55
PTCD1-202ENST00000419981 A6NHS1 94 aa11.61□□□□□ -0.55
PTCD1-202ENST00000419981 TAAR5O14804 337 aa11.61□□□□□ -0.55
PTCD1-202ENST00000419981 RS1O15537 224 aa11.61□□□□□ -0.55
PTCD1-202ENST00000419981 GCGP01275 180 aa11.61□□□□□ -0.55
PTCD1-202ENST00000419981 ZNF80P51504 273 aaPredicted RBP11.61□□□□□ -0.55
PTCD1-202ENST00000419981 ZFP69Q49AA0 526 aa11.61□□□□□ -0.55
PTCD1-202ENST00000419981 CFAP126Q5VTH2 177 aa11.61□□□□□ -0.55
PTCD1-202ENST00000419981 HSD17B11Q8NBQ5 300 aa11.61□□□□□ -0.55
PTCD1-202ENST00000419981 OR2G3Q8NGZ4 309 aa11.61□□□□□ -0.55
PTCD1-202ENST00000419981 IGLV5-52A0A0A0MRZ9 124 aa11.6□□□□□ -0.55
PTCD1-202ENST00000419981 IGHV3-73A0A0B4J1V6 119 aa11.6□□□□□ -0.55
PTCD1-202ENST00000419981 TRBV6-4A0A1B0GX49 114 aa11.6□□□□□ -0.55
PTCD1-202ENST00000419981 IBA57-AS1B1ANH7 110 aa11.6□□□□□ -0.55
PTCD1-202ENST00000419981 GCHFRP30047 84 aa11.6□□□□□ -0.55
PTCD1-202ENST00000419981 DPPA3Q6W0C5 159 aa11.6□□□□□ -0.55
PTCD1-202ENST00000419981 NTN5Q8WTR8 489 aaPredicted RBP11.6□□□□□ -0.55
PTCD1-202ENST00000419981 RAB24Q969Q5 203 aa11.6□□□□□ -0.55
PTCD1-202ENST00000419981 C9orf85Q96MD7 179 aa11.6□□□□□ -0.55
PTCD1-202ENST00000419981 PSMG3Q9BT73 122 aaPredicted RBP11.6□□□□□ -0.55
PTCD1-202ENST00000419981 C11orf21Q9P2W6 132 aa11.6□□□□□ -0.55
PTCD1-202ENST00000419981 PSG8Q9UQ74 426 aa11.6□□□□□ -0.55
PTCD1-202ENST00000419981 LRCOL1A6NCL2 159 aa11.59□□□□□ -0.55
PTCD1-202ENST00000419981 FLI1Q01543 452 aaPredicted RBP11.59□□□□□ -0.55
PTCD1-202ENST00000419981 SMUG1Q53HV7 270 aa11.59□□□□□ -0.55
PTCD1-202ENST00000419981 ZNF506Q5JVG8 444 aa11.59□□□□□ -0.55
PTCD1-202ENST00000419981 TMEM75Q8N9X5 138 aa11.59□□□□□ -0.55
PTCD1-202ENST00000419981 SUN5Q8TC36 379 aa11.59□□□□□ -0.55
PTCD1-202ENST00000419981 Q9HAA7 133 aa11.59□□□□□ -0.55
PTCD1-202ENST00000419981 PGPEP1LA6NFU8 196 aa11.58□□□□□ -0.56
PTCD1-202ENST00000419981 IGHV3-30P01768 117 aa11.58□□□□□ -0.56
PTCD1-202ENST00000419981 IGHV3-33P01772 117 aa11.58□□□□□ -0.56
PTCD1-202ENST00000419981 MBP02144 154 aa11.58□□□□□ -0.56
PTCD1-202ENST00000419981 IGHV3-30-3P0DP02 117 aa11.58□□□□□ -0.56
PTCD1-202ENST00000419981 IGHV3-30-5P0DP03 117 aa11.58□□□□□ -0.56
PTCD1-202ENST00000419981 MGST1P10620 155 aaKnown RBP11.58□□□□□ -0.56
PTCD1-202ENST00000419981 ATP6V0CP27449 155 aa11.58□□□□□ -0.56
PTCD1-202ENST00000419981 SUMO1P63165 101 aaKnown RBP11.58□□□□□ -0.56
PTCD1-202ENST00000419981 LELP1Q5T871 98 aa11.58□□□□□ -0.56
PTCD1-202ENST00000419981 PRNTQ86SH4 94 aa11.58□□□□□ -0.56
PTCD1-202ENST00000419981 CYB561D1Q8N8Q1 229 aa11.58□□□□□ -0.56
PTCD1-202ENST00000419981 CXorf1O96002 111 aa11.57□□□□□ -0.56
PTCD1-202ENST00000419981 IGLV2-11P01706 119 aa11.57□□□□□ -0.56
PTCD1-202ENST00000419981 SMR3BP02814 79 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms