RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 RRAS2P62070 204 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 RPS25P62851 125 aaKnown RBP1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 QRFPP83859 136 aa1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 NDUFA5Q16718 116 aa1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 HSD17B12Q53GQ0 312 aa1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 OR4S1Q8NGB4 309 aa1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 AP1S3Q96PC3 154 aa1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 C2orf88Q9BSF0 95 aa1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 BANF2Q9H503 90 aa1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 RBBP6Q7Z6E9 1792 aaKnown RBP1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 CITO14578 2027 aa1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 PLCH1Q4KWH8 1693 aa1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 PSME4Q14997 1843 aa1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 SBF2Q86WG5 1849 aa1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 TAF1LQ8IZX4 1826 aa1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 ARFGEF1Q9Y6D6 1849 aa1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 UBR1Q8IWV7 1749 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 MICAL3Q7RTP6 2002 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 CCDC88CQ9P219 2028 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 LAMB2P55268 1798 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 MYO18AQ92614 2054 aaKnown RBP1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 KIF1AQ12756 1690 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 C2orf70A6NJV1 201 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 M0R129 80 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 DLEU1O43261 78 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 SULT1C4O75897 302 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 UBL3O95164 117 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 IGF2P01344 180 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 HBDP02042 147 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 CRPP02741 224 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 IFNA4P05014 189 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 CD14P08571 375 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 SLC25A4P12235 298 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 MAXP61244 160 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 SNRPD3P62318 126 aaKnown RBP1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 Q1T7F1 81 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 LINC00311Q8N616 119 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 OR2T35Q8NGX2 323 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 RNASE11Q8TAA1 199 aaKnown RBP1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 CLEC2BQ92478 149 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 PSMF1Q92530 271 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 CGREF1Q99674 301 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 NABP2Q9BQ15 211 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 GGACTQ9BVM4 153 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 NHP2Q9NX24 153 aaKnown RBP1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 DNAJC15Q9Y5T4 150 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 GLI3P10071 1580 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 COL4A2P08572 1712 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 TOGARAM1Q9Y4F4 1720 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 FER1L6Q2WGJ9 1857 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 LRP5O75197 1615 aa1.37□□□□□ -2.19
HMGB1P49-201ENST00000418882 RGPD3A6NKT7 1758 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 STRCQ7RTU9 1775 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 RGPD4Q7Z3J3 1758 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 C5orf67F2Z3F1 127 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 UQCRQO14949 82 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 NPFFO15130 113 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 SMIM24O75264 130 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 BAALC-AS2P0C853 105 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 FABP4P15090 132 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 PLXNA3P51805 1871 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 BLCAPP62952 87 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 NEDD8Q15843 81 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 TMEM91Q6ZNR0 172 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 C3orf62Q6ZUJ4 267 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 FAM19A2Q8N3H0 131 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 Q8TAT8 98 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 RAB37Q96AX2 223 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 HYLS1Q96M11 299 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 SDF2Q99470 211 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 TTTY12Q9BZ98 90 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 LINC00470Q9BZP3 86 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 TMEM106BQ9NUM4 274 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 CALML5Q9NZT1 146 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 DIP2BQ9P265 1576 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 COMMD3Q9UBI1 195 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 PAIP2BQ9ULR5 123 aaKnown RBP1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 CHCHD2Q9Y6H1 151 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 PTPRFP10586 1907 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 PAPPAQ13219 1627 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 PXDNQ92626 1479 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 ZFC3H1O60293 1989 aaKnown RBP1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 FOCADQ5VW36 1801 aa1.36□□□□□ -2.19
HMGB1P49-201ENST00000418882 GBF1Q92538 1859 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 MPDZO75970 2070 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 C10orf71Q711Q0 1435 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 TRAV12-1A0A0B4J245 112 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 LOC100130705A0A1B0GUX0 176 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 A6NN06 94 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 K7ERU9 68 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 M0R233 179 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 CD3DP04234 171 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 CCL4P13236 92 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 HLA-DRB4P13762 266 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 NCS1P62166 190 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 MRPS36P82909 103 aaKnown RBP1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 NUMA1Q14980 2115 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 CCSMST1Q4G0I0 132 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 SPANXN5Q5MJ07 72 aa1.35□□□□□ -2.19
HMGB1P49-201ENST00000418882 TEN1Q86WV5 123 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms