RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 HMGB3O15347 200 aaKnown RBP9.63□□□□□ -0.87
LINC01006-202ENST00000418309 ORM1P02763 201 aa9.63□□□□□ -0.87
LINC01006-202ENST00000418309 TREM1Q9NP99 234 aa9.63□□□□□ -0.87
LINC01006-202ENST00000418309 TRAV8-1A0A0A6YYK1 113 aa9.62□□□□□ -0.87
LINC01006-202ENST00000418309 TRAV4A0A0B4J268 109 aa9.62□□□□□ -0.87
LINC01006-202ENST00000418309 C9JCJ5 164 aa9.62□□□□□ -0.87
LINC01006-202ENST00000418309 F6UZH7 168 aa9.62□□□□□ -0.87
LINC01006-202ENST00000418309 M0R2P5 195 aa9.62□□□□□ -0.87
LINC01006-202ENST00000418309 EVI2AP22794 236 aa9.62□□□□□ -0.87
LINC01006-202ENST00000418309 FUSP35637 526 aaKnown RBP eCLIP9.62□□□□□ -0.87
LINC01006-202ENST00000418309 RAB2AP61019 212 aa9.62□□□□□ -0.87
LINC01006-202ENST00000418309 TDRG1Q3Y452 100 aa9.62□□□□□ -0.87
LINC01006-202ENST00000418309 OR10G9Q8NGN4 311 aa9.62□□□□□ -0.87
LINC01006-202ENST00000418309 OR10G7Q8NGN6 311 aa9.62□□□□□ -0.87
LINC01006-202ENST00000418309 TXNDC17Q9BRA2 123 aa9.62□□□□□ -0.87
LINC01006-202ENST00000418309 SDF2L1Q9HCN8 221 aa9.62□□□□□ -0.87
LINC01006-202ENST00000418309 LRP1BQ9NZR2 4599 aa9.61□□□□□ -0.87
LINC01006-202ENST00000418309 IGHV3-16A0A0C4DH30 117 aa9.61□□□□□ -0.87
LINC01006-202ENST00000418309 GNG5P63218 68 aa9.61□□□□□ -0.87
LINC01006-202ENST00000418309 WFDC10BQ8IUB3 73 aa9.61□□□□□ -0.87
LINC01006-202ENST00000418309 SGK494Q96LW2 274 aa9.61□□□□□ -0.87
LINC01006-202ENST00000418309 TYMSP04818 313 aa9.6□□□□□ -0.87
LINC01006-202ENST00000418309 ARL6IP6Q8N6S5 226 aa9.6□□□□□ -0.87
LINC01006-202ENST00000418309 NHLRC2Q8NBF2 726 aa9.6□□□□□ -0.87
LINC01006-202ENST00000418309 TVP23CQ96ET8 276 aa9.6□□□□□ -0.87
LINC01006-202ENST00000418309 KCNS1Q96KK3 526 aa9.6□□□□□ -0.87
LINC01006-202ENST00000418309 NDFIP1Q9BT67 221 aa9.6□□□□□ -0.87
LINC01006-202ENST00000418309 MSRB1Q9NZV6 116 aa9.6□□□□□ -0.87
LINC01006-202ENST00000418309 ABCA13Q86UQ4 5058 aa9.59□□□□□ -0.87
LINC01006-202ENST00000418309 LOC100131303A0A0U1RQF7 123 aa9.59□□□□□ -0.87
LINC01006-202ENST00000418309 K7EP13 123 aa9.59□□□□□ -0.87
LINC01006-202ENST00000418309 DNAH10OSP0CZ25 163 aa9.59□□□□□ -0.87
LINC01006-202ENST00000418309 ARL14EPLP0DKL9 152 aa9.59□□□□□ -0.87
LINC01006-202ENST00000418309 CDC34P49427 236 aaPredicted RBP9.59□□□□□ -0.87
LINC01006-202ENST00000418309 HSD17B11Q8NBQ5 300 aa9.59□□□□□ -0.87
LINC01006-202ENST00000418309 ASB13Q8WXK3 278 aa9.59□□□□□ -0.87
LINC01006-202ENST00000418309 A0A087WTM6 91 aa9.58□□□□□ -0.88
LINC01006-202ENST00000418309 LOC100996750A0A140TA64 210 aa9.58□□□□□ -0.88
LINC01006-202ENST00000418309 K7EQM0 130 aa9.58□□□□□ -0.88
LINC01006-202ENST00000418309 CRYGDP07320 174 aa9.58□□□□□ -0.88
LINC01006-202ENST00000418309 PPT1P50897 306 aa9.58□□□□□ -0.88
LINC01006-202ENST00000418309 CDPF1Q6NVV7 123 aa9.58□□□□□ -0.88
LINC01006-202ENST00000418309 SH2D6Q7Z4S9 175 aa9.58□□□□□ -0.88
LINC01006-202ENST00000418309 KRTAP4-6Q9BYQ5 205 aa9.58□□□□□ -0.88
LINC01006-202ENST00000418309 SERTM2A0A1B0GWG4 89 aa9.57□□□□□ -0.88
LINC01006-202ENST00000418309 ZNF876PQ49A33 203 aa9.57□□□□□ -0.88
LINC01006-202ENST00000418309 C10orf126Q8N4M7 172 aa9.57□□□□□ -0.88
LINC01006-202ENST00000418309 RAB24Q969Q5 203 aa9.57□□□□□ -0.88
LINC01006-202ENST00000418309 ALG5Q9Y673 324 aa9.57□□□□□ -0.88
LINC01006-202ENST00000418309 FBLL1A6NHQ2 334 aaKnown RBP9.56□□□□□ -0.88
LINC01006-202ENST00000418309 TAAR5O14804 337 aa9.56□□□□□ -0.88
LINC01006-202ENST00000418309 STAG3L2P0CL84 134 aa9.56□□□□□ -0.88
LINC01006-202ENST00000418309 STAG3L3P0CL85 134 aa9.56□□□□□ -0.88
LINC01006-202ENST00000418309 GATA1P15976 413 aaPredicted RBP9.56□□□□□ -0.88
LINC01006-202ENST00000418309 GCHFRP30047 84 aa9.56□□□□□ -0.88
LINC01006-202ENST00000418309 C5orf17Q8NAS9 161 aa9.56□□□□□ -0.88
LINC01006-202ENST00000418309 PSG8Q9UQ74 426 aa9.56□□□□□ -0.88
LINC01006-202ENST00000418309 IGHV3-73A0A0B4J1V6 119 aa9.55□□□□□ -0.88
LINC01006-202ENST00000418309 IGHV3-38A0A0C4DH36 116 aa9.55□□□□□ -0.88
LINC01006-202ENST00000418309 EPM2AB3EWF7 344 aa9.55□□□□□ -0.88
LINC01006-202ENST00000418309 PSCAO43653 123 aa9.55□□□□□ -0.88
LINC01006-202ENST00000418309 GCGP01275 180 aa9.55□□□□□ -0.88
LINC01006-202ENST00000418309 MBP02144 154 aa9.55□□□□□ -0.88
LINC01006-202ENST00000418309 TCRAP04437 139 aa9.55□□□□□ -0.88
LINC01006-202ENST00000418309 PFN1P07737 140 aaKnown RBP9.55□□□□□ -0.88
LINC01006-202ENST00000418309 ATP6V0CP27449 155 aa9.55□□□□□ -0.88
LINC01006-202ENST00000418309 ZNF80P51504 273 aaPredicted RBP9.55□□□□□ -0.88
LINC01006-202ENST00000418309 SUMO1P63165 101 aaKnown RBP9.55□□□□□ -0.88
LINC01006-202ENST00000418309 PRNTQ86SH4 94 aa9.55□□□□□ -0.88
LINC01006-202ENST00000418309 OR2G3Q8NGZ4 309 aa9.55□□□□□ -0.88
LINC01006-202ENST00000418309 PRADC1Q9BSG0 188 aa9.55□□□□□ -0.88
LINC01006-202ENST00000418309 MED28Q9H204 178 aa9.55□□□□□ -0.88
LINC01006-202ENST00000418309 TRAV8-6A0A0B4J262 113 aa9.54□□□□□ -0.88
LINC01006-202ENST00000418309 CXorf1O96002 111 aa9.54□□□□□ -0.88
LINC01006-202ENST00000418309 ZFP69Q49AA0 526 aa9.54□□□□□ -0.88
LINC01006-202ENST00000418309 SMUG1Q53HV7 270 aa9.54□□□□□ -0.88
LINC01006-202ENST00000418309 OR10J3Q5JRS4 329 aa9.54□□□□□ -0.88
LINC01006-202ENST00000418309 CFAP126Q5VTH2 177 aa9.54□□□□□ -0.88
LINC01006-202ENST00000418309 SLC25A29Q8N8R3 303 aa9.54□□□□□ -0.88
LINC01006-202ENST00000418309 PSMG3Q9BT73 122 aaPredicted RBP9.54□□□□□ -0.88
LINC01006-202ENST00000418309 C11orf21Q9P2W6 132 aa9.54□□□□□ -0.88
LINC01006-202ENST00000418309 EPDR1Q9UM22 224 aa9.54□□□□□ -0.88
LINC01006-202ENST00000418309 DNAH5Q8TE73 4624 aa9.53□□□□□ -0.88
LINC01006-202ENST00000418309 RS1O15537 224 aa9.53□□□□□ -0.88
LINC01006-202ENST00000418309 CIDEAO60543 219 aa9.53□□□□□ -0.88
LINC01006-202ENST00000418309 TIRAPP58753 221 aa9.53□□□□□ -0.88
LINC01006-202ENST00000418309 KRTAP10-1P60331 282 aa9.53□□□□□ -0.88
LINC01006-202ENST00000418309 SERF2P84101 59 aa9.53□□□□□ -0.88
LINC01006-202ENST00000418309 FLI1Q01543 452 aaPredicted RBP9.53□□□□□ -0.88
LINC01006-202ENST00000418309 RHOHQ15669 191 aa9.53□□□□□ -0.88
LINC01006-202ENST00000418309 TMEM75Q8N9X5 138 aa9.53□□□□□ -0.88
LINC01006-202ENST00000418309 AQP10Q96PS8 301 aa9.53□□□□□ -0.88
LINC01006-202ENST00000418309 ACTR3CQ9C0K3 210 aaPredicted RBP9.53□□□□□ -0.88
LINC01006-202ENST00000418309 TMEM167BQ9NRX6 74 aa9.53□□□□□ -0.88
LINC01006-202ENST00000418309 APOBP04114 4563 aaKnown RBP9.52□□□□□ -0.88
LINC01006-202ENST00000418309 PGPEP1LA6NFU8 196 aa9.52□□□□□ -0.89
LINC01006-202ENST00000418309 GCSHP23434 173 aa9.52□□□□□ -0.89
LINC01006-202ENST00000418309 XGP55808 180 aa9.52□□□□□ -0.89
LINC01006-202ENST00000418309 DPPA3Q6W0C5 159 aa9.52□□□□□ -0.89
LINC01006-202ENST00000418309 CYB561D1Q8N8Q1 229 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms