RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 GTSF1Q8WW33 167 aa15.42■□□□□ 0.06
CASC3-203ENST00000418132 TMEM18Q96B42 140 aa15.42■□□□□ 0.06
CASC3-203ENST00000418132 HLA-DRB4X5D2U9 266 aa15.42■□□□□ 0.06
CASC3-203ENST00000418132 A8MTW9 85 aa15.41■□□□□ 0.06
CASC3-203ENST00000418132 KLLNB2CW77 178 aa15.41■□□□□ 0.06
CASC3-203ENST00000418132 GPX1P07203 203 aa15.41■□□□□ 0.06
CASC3-203ENST00000418132 AGRNO00468 2067 aa15.41■□□□□ 0.06
CASC3-203ENST00000418132 KNCNA6PVL3 124 aa15.4■□□□□ 0.06
CASC3-203ENST00000418132 INSL3P51460 131 aa15.4■□□□□ 0.06
CASC3-203ENST00000418132 FOXA3P55318 350 aaPredicted RBP15.4■□□□□ 0.06
CASC3-203ENST00000418132 LINC01559Q495D7 138 aa15.4■□□□□ 0.06
CASC3-203ENST00000418132 SPATA3Q8NHX4 192 aa15.4■□□□□ 0.06
CASC3-203ENST00000418132 H3BMM0 161 aa15.4■□□□□ 0.06
CASC3-203ENST00000418132 GZMBP10144 247 aa15.4■□□□□ 0.06
CASC3-203ENST00000418132 BEAN1Q3B7T3 259 aa15.4■□□□□ 0.06
CASC3-203ENST00000418132 AMTNQ6UX39 209 aa15.4■□□□□ 0.06
CASC3-203ENST00000418132 ZNF575Q86XF7 245 aa15.4■□□□□ 0.06
CASC3-203ENST00000418132 J3KRW8 73 aa15.39■□□□□ 0.05
CASC3-203ENST00000418132 IGKV3-20P01619 116 aa15.39■□□□□ 0.05
CASC3-203ENST00000418132 APCSP02743 223 aa15.39■□□□□ 0.05
CASC3-203ENST00000418132 LEPP41159 167 aa15.39■□□□□ 0.05
CASC3-203ENST00000418132 RPS20P60866 119 aaKnown RBP15.39■□□□□ 0.05
CASC3-203ENST00000418132 Q0VG73 95 aa15.39■□□□□ 0.05
CASC3-203ENST00000418132 KIR3DS1Q14943 382 aa15.39■□□□□ 0.05
CASC3-203ENST00000418132 ZNF124Q15973 351 aa15.39■□□□□ 0.05
CASC3-203ENST00000418132 Q6AWC8 147 aa15.39■□□□□ 0.05
CASC3-203ENST00000418132 C11orf21Q9P2W6 132 aa15.39■□□□□ 0.05
CASC3-203ENST00000418132 ORM1P02763 201 aa15.38■□□□□ 0.05
CASC3-203ENST00000418132 CMC4P56277 68 aaPredicted RBP15.38■□□□□ 0.05
CASC3-203ENST00000418132 LINC00310P59036 64 aa15.38■□□□□ 0.05
CASC3-203ENST00000418132 C9orf66Q5T8R8 295 aa15.38■□□□□ 0.05
CASC3-203ENST00000418132 TRAV21A0A0B4J279 112 aa15.38■□□□□ 0.05
CASC3-203ENST00000418132 F2Z2F3 143 aa15.38■□□□□ 0.05
CASC3-203ENST00000418132 SLAQ13239 276 aa15.38■□□□□ 0.05
CASC3-203ENST00000418132 Q6ZQT7 251 aa15.38■□□□□ 0.05
CASC3-203ENST00000418132 ATP5L2Q7Z4Y8 100 aa15.38■□□□□ 0.05
CASC3-203ENST00000418132 C3orf56Q8N813 242 aa15.38■□□□□ 0.05
CASC3-203ENST00000418132 WFDC9Q8NEX5 89 aa15.38■□□□□ 0.05
CASC3-203ENST00000418132 FAM110AQ9BQ89 295 aa15.38■□□□□ 0.05
CASC3-203ENST00000418132 TMSB15BA0A087X1C1 80 aa15.37■□□□□ 0.05
CASC3-203ENST00000418132 OR11H12B2RN74 326 aa15.37■□□□□ 0.05
CASC3-203ENST00000418132 SERF1AO75920 110 aa15.37■□□□□ 0.05
CASC3-203ENST00000418132 RNASE4P34096 147 aaKnown RBP15.37■□□□□ 0.05
CASC3-203ENST00000418132 CAMPP49913 170 aa15.37■□□□□ 0.05
CASC3-203ENST00000418132 JOSD1Q15040 202 aaPredicted RBP15.37■□□□□ 0.05
CASC3-203ENST00000418132 BAGE3Q86Y29 109 aa15.37■□□□□ 0.05
CASC3-203ENST00000418132 TMEM158Q8WZ71 300 aa15.37■□□□□ 0.05
CASC3-203ENST00000418132 PGLYRP4Q96LB8 373 aa15.37■□□□□ 0.05
CASC3-203ENST00000418132 IGKV3D-20A0A0C4DH25 116 aa15.36■□□□□ 0.05
CASC3-203ENST00000418132 A0A1B0GXF2 115 aa15.36■□□□□ 0.05
CASC3-203ENST00000418132 TSPOP30536 169 aa15.36■□□□□ 0.05
CASC3-203ENST00000418132 SRIP30626 198 aa15.36■□□□□ 0.05
CASC3-203ENST00000418132 CDKN1BP46527 198 aa15.36■□□□□ 0.05
CASC3-203ENST00000418132 SHISA2Q6UWI4 295 aa15.36■□□□□ 0.05
CASC3-203ENST00000418132 C12orf54Q6X4T0 127 aa15.36■□□□□ 0.05
CASC3-203ENST00000418132 STAB1Q9NY15 2570 aa15.36■□□□□ 0.05
CASC3-203ENST00000418132 ESDP10768 282 aa15.35■□□□□ 0.05
CASC3-203ENST00000418132 DNLZQ5SXM8 178 aa15.35■□□□□ 0.05
CASC3-203ENST00000418132 CLUHP3Q96NS8 147 aa15.35■□□□□ 0.05
CASC3-203ENST00000418132 M0R2Z0 102 aa15.35■□□□□ 0.05
CASC3-203ENST00000418132 OR10J3Q5JRS4 329 aa15.35■□□□□ 0.05
CASC3-203ENST00000418132 MCRIP2Q9BUT9 160 aaKnown RBP15.35■□□□□ 0.05
CASC3-203ENST00000418132 SSBP4Q9BWG4 385 aaPredicted RBP15.35■□□□□ 0.05
CASC3-203ENST00000418132 C7orf71A4D174 169 aa15.34■□□□□ 0.05
CASC3-203ENST00000418132 RBMY1BA6NDE4 496 aaKnown RBP15.34■□□□□ 0.05
CASC3-203ENST00000418132 RBMY1EA6NEQ0 496 aaKnown RBP15.34■□□□□ 0.05
CASC3-203ENST00000418132 CD7P09564 240 aa15.34■□□□□ 0.05
CASC3-203ENST00000418132 RBMY1DP0C7P1 496 aaKnown RBP15.34■□□□□ 0.05
CASC3-203ENST00000418132 HBBP68871 147 aa15.34■□□□□ 0.05
CASC3-203ENST00000418132 SPINK13Q1W4C9 94 aa15.34■□□□□ 0.05
CASC3-203ENST00000418132 C19orf73Q9NVV2 129 aa15.34■□□□□ 0.05
CASC3-203ENST00000418132 IGLC6P0CF74 106 aa15.33■□□□□ 0.05
CASC3-203ENST00000418132 NOTCH3Q9UM47 2321 aa15.32■□□□□ 0.04
CASC3-203ENST00000418132 COL6A5A8TX70 2615 aa15.32■□□□□ 0.04
CASC3-203ENST00000418132 ZNF324O75467 553 aaPredicted RBP15.32■□□□□ 0.04
CASC3-203ENST00000418132 TRAV12-2A0A075B6T6 113 aa15.31■□□□□ 0.04
CASC3-203ENST00000418132 FER1L6-AS1Q8NA97 138 aa15.31■□□□□ 0.04
CASC3-203ENST00000418132 CTRLP40313 264 aa15.31■□□□□ 0.04
CASC3-203ENST00000418132 PRR31Q5SQ13 230 aa15.31■□□□□ 0.04
CASC3-203ENST00000418132 LYZL1Q6UWQ5 148 aa15.31■□□□□ 0.04
CASC3-203ENST00000418132 RCHY1Q96PM5 261 aa15.31■□□□□ 0.04
CASC3-203ENST00000418132 TRAV12-3A0A0B4J271 114 aa15.3■□□□□ 0.04
CASC3-203ENST00000418132 A0A1B0GUT8 65 aa15.3■□□□□ 0.04
CASC3-203ENST00000418132 LINC00587B1AMM8 73 aa15.3■□□□□ 0.04
CASC3-203ENST00000418132 ANXA2RQ3ZCQ2 193 aa15.3■□□□□ 0.04
CASC3-203ENST00000418132 STHQ8IWL8 128 aa15.3■□□□□ 0.04
CASC3-203ENST00000418132 TPPP3Q9BW30 176 aa15.3■□□□□ 0.04
CASC3-203ENST00000418132 NAGKQ9UJ70 344 aa15.3■□□□□ 0.04
CASC3-203ENST00000418132 CRXO43186 299 aaPredicted RBP15.29■□□□□ 0.04
CASC3-203ENST00000418132 WIPF1O43516 503 aa15.29■□□□□ 0.04
CASC3-203ENST00000418132 ARMS2P0C7Q2 107 aa15.29■□□□□ 0.04
CASC3-203ENST00000418132 TRPT1Q86TN4 253 aaKnown RBP15.29■□□□□ 0.04
CASC3-203ENST00000418132 MUC21Q5SSG8 566 aa15.29■□□□□ 0.04
CASC3-203ENST00000418132 FXYD7P58549 80 aa15.28■□□□□ 0.04
CASC3-203ENST00000418132 C18orf32Q8TCD1 76 aa15.28■□□□□ 0.04
CASC3-203ENST00000418132 ALKBH7Q9BT30 221 aaPredicted RBP15.28■□□□□ 0.04
CASC3-203ENST00000418132 IQCJQ1A5X6 159 aa15.27■□□□□ 0.04
CASC3-203ENST00000418132 TDRG1Q3Y452 100 aa15.27■□□□□ 0.04
CASC3-203ENST00000418132 CNFNQ9BYD5 112 aa15.27■□□□□ 0.04
CASC3-203ENST00000418132 SAMD10Q9BYL1 202 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms