RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 RBMY1A1P0DJD3 496 aaKnown RBP6.15□□□□□ -1.43
TRIM48-201ENST00000417545 RBMY1CP0DJD4 496 aa6.15□□□□□ -1.43
TRIM48-201ENST00000417545 ASIPP42127 132 aa6.15□□□□□ -1.43
TRIM48-201ENST00000417545 ZNF80P51504 273 aaPredicted RBP6.15□□□□□ -1.43
TRIM48-201ENST00000417545 ERVFC1-1P60608 527 aa6.15□□□□□ -1.43
TRIM48-201ENST00000417545 RBMY1FQ15415 496 aaKnown RBP6.15□□□□□ -1.43
TRIM48-201ENST00000417545 NDUFA5Q16718 116 aa6.15□□□□□ -1.43
TRIM48-201ENST00000417545 IBA57Q5T440 356 aaKnown RBP6.15□□□□□ -1.43
TRIM48-201ENST00000417545 ZNF705AQ6ZN79 300 aaPredicted RBP6.15□□□□□ -1.43
TRIM48-201ENST00000417545 LINC00528Q8N1L1 170 aa6.15□□□□□ -1.43
TRIM48-201ENST00000417545 C15orf54Q8N8G6 183 aa6.15□□□□□ -1.43
TRIM48-201ENST00000417545 CSNK1G2-AS1Q8NCQ2 148 aa6.15□□□□□ -1.43
TRIM48-201ENST00000417545 TIMM8BQ9Y5J9 83 aaPredicted RBP6.15□□□□□ -1.43
TRIM48-201ENST00000417545 LY96Q9Y6Y9 160 aa6.15□□□□□ -1.43
TRIM48-201ENST00000417545 TRBV20OR9-2A0A075B6H5 130 aa6.14□□□□□ -1.43
TRIM48-201ENST00000417545 IGHV4-28A0A0C4DH34 117 aa6.14□□□□□ -1.43
TRIM48-201ENST00000417545 KRTAP9-6A0A140TA67 174 aa6.14□□□□□ -1.43
TRIM48-201ENST00000417545 C9JQL5 133 aa6.14□□□□□ -1.43
TRIM48-201ENST00000417545 GATCO43716 136 aaKnown RBP6.14□□□□□ -1.43
TRIM48-201ENST00000417545 ZNF324O75467 553 aaPredicted RBP6.14□□□□□ -1.43
TRIM48-201ENST00000417545 RPS20P60866 119 aaKnown RBP6.14□□□□□ -1.43
TRIM48-201ENST00000417545 ANXA2RQ3ZCQ2 193 aa6.14□□□□□ -1.43
TRIM48-201ENST00000417545 ZNF493Q6ZR52 646 aa6.14□□□□□ -1.43
TRIM48-201ENST00000417545 OCC1Q8TAD7 63 aa6.14□□□□□ -1.43
TRIM48-201ENST00000417545 TMEM263Q8WUH6 116 aaKnown RBP6.14□□□□□ -1.43
TRIM48-201ENST00000417545 NEU1Q99519 415 aa6.14□□□□□ -1.43
TRIM48-201ENST00000417545 U3KQK5 164 aa6.14□□□□□ -1.43
TRIM48-201ENST00000417545 TEX48A0A1B0GUV7 120 aa6.13□□□□□ -1.43
TRIM48-201ENST00000417545 DEFB4AO15263 64 aa6.13□□□□□ -1.43
TRIM48-201ENST00000417545 PNRC1Q12796 327 aaPredicted RBP6.13□□□□□ -1.43
TRIM48-201ENST00000417545 COX8CQ7Z4L0 72 aa6.13□□□□□ -1.43
TRIM48-201ENST00000417545 OR2D3Q8NGH3 330 aa6.13□□□□□ -1.43
TRIM48-201ENST00000417545 MLST8Q9BVC4 326 aa6.13□□□□□ -1.43
TRIM48-201ENST00000417545 X6R8D5 127 aa6.13□□□□□ -1.43
TRIM48-201ENST00000417545 NBEAL1Q6ZS30 2694 aa6.13□□□□□ -1.43
TRIM48-201ENST00000417545 A0A0J9YWU9 116 aa6.12□□□□□ -1.43
TRIM48-201ENST00000417545 TMEM218A2RU14 115 aa6.12□□□□□ -1.43
TRIM48-201ENST00000417545 GRIFINA4D1Z8 144 aa6.12□□□□□ -1.43
TRIM48-201ENST00000417545 CXorf65A6NEN9 183 aa6.12□□□□□ -1.43
TRIM48-201ENST00000417545 IGLV2-8P01709 118 aa6.12□□□□□ -1.43
TRIM48-201ENST00000417545 TYMSP04818 313 aa6.12□□□□□ -1.43
TRIM48-201ENST00000417545 RPL23P62829 140 aaKnown RBP6.12□□□□□ -1.43
TRIM48-201ENST00000417545 Q6ZQT7 251 aa6.12□□□□□ -1.43
TRIM48-201ENST00000417545 LINC01551Q86U37 167 aa6.12□□□□□ -1.43
TRIM48-201ENST00000417545 LINC00467Q9BRT7 94 aa6.12□□□□□ -1.43
TRIM48-201ENST00000417545 TPPP3Q9BW30 176 aa6.12□□□□□ -1.43
TRIM48-201ENST00000417545 RNASE7Q9H1E1 156 aaKnown RBP6.12□□□□□ -1.43
TRIM48-201ENST00000417545 C11orf68Q9H3H3 251 aaKnown RBP6.12□□□□□ -1.43
TRIM48-201ENST00000417545 RPP21Q9H633 154 aaKnown RBP6.12□□□□□ -1.43
TRIM48-201ENST00000417545 TP53TG3Q9ULZ0 132 aa6.12□□□□□ -1.43
TRIM48-201ENST00000417545 KRBOX1C9JBD0 128 aa6.11□□□□□ -1.43
TRIM48-201ENST00000417545 H3BVH4 76 aa6.11□□□□□ -1.43
TRIM48-201ENST00000417545 K7EN84 100 aa6.11□□□□□ -1.43
TRIM48-201ENST00000417545 GNRH2O43555 120 aa6.11□□□□□ -1.43
TRIM48-201ENST00000417545 PRM2P04554 102 aa6.11□□□□□ -1.43
TRIM48-201ENST00000417545 SPART-AS1P0CW21 52 aa6.11□□□□□ -1.43
TRIM48-201ENST00000417545 AZU1P20160 251 aa6.11□□□□□ -1.43
TRIM48-201ENST00000417545 RPL19P84098 196 aaKnown RBP6.11□□□□□ -1.43
TRIM48-201ENST00000417545 Q8NAQ8 132 aa6.11□□□□□ -1.43
TRIM48-201ENST00000417545 NUDT10Q8NFP7 164 aa6.11□□□□□ -1.43
TRIM48-201ENST00000417545 OR10G8Q8NGN5 311 aa6.11□□□□□ -1.43
TRIM48-201ENST00000417545 BORCS7Q96B45 105 aa6.11□□□□□ -1.43
TRIM48-201ENST00000417545 NUDT11Q96G61 164 aa6.11□□□□□ -1.43
TRIM48-201ENST00000417545 SPXQ9BT56 116 aa6.11□□□□□ -1.43
TRIM48-201ENST00000417545 SEC11CQ9BY50 192 aa6.11□□□□□ -1.43
TRIM48-201ENST00000417545 GSN-AS1Q9NRJ2 163 aa6.11□□□□□ -1.43
TRIM48-201ENST00000417545 TRGV2A0A075B6R0 118 aa6.1□□□□□ -1.43
TRIM48-201ENST00000417545 TRGV1A0A0A0MS02 117 aa6.1□□□□□ -1.43
TRIM48-201ENST00000417545 PPP1R2P9O14990 202 aa6.1□□□□□ -1.43
TRIM48-201ENST00000417545 MT-ND4LP03901 98 aa6.1□□□□□ -1.43
TRIM48-201ENST00000417545 CRIP1P50238 77 aa6.1□□□□□ -1.43
TRIM48-201ENST00000417545 TCL1AP56279 114 aa6.1□□□□□ -1.43
TRIM48-201ENST00000417545 DAD1P61803 113 aa6.1□□□□□ -1.43
TRIM48-201ENST00000417545 TDRG1Q3Y452 100 aa6.1□□□□□ -1.43
TRIM48-201ENST00000417545 FAM231DQ6ZW35 169 aa6.1□□□□□ -1.43
TRIM48-201ENST00000417545 SYT8Q8NBV8 401 aa6.1□□□□□ -1.43
TRIM48-201ENST00000417545 RNASE8Q8TDE3 154 aaKnown RBP6.1□□□□□ -1.43
TRIM48-201ENST00000417545 ISOC2Q96AB3 205 aa6.1□□□□□ -1.43
TRIM48-201ENST00000417545 SFRP2Q96HF1 295 aa6.1□□□□□ -1.43
TRIM48-201ENST00000417545 NOP10Q9NPE3 64 aaKnown RBP6.1□□□□□ -1.43
TRIM48-201ENST00000417545 OSTCQ9NRP0 149 aa6.1□□□□□ -1.43
TRIM48-201ENST00000417545 PHLDA3Q9Y5J5 127 aa6.1□□□□□ -1.43
TRIM48-201ENST00000417545 IGKV3D-20A0A0C4DH25 116 aa6.09□□□□□ -1.43
TRIM48-201ENST00000417545 IGHV3-16A0A0C4DH30 117 aa6.09□□□□□ -1.43
TRIM48-201ENST00000417545 C19orf71A6NCJ1 209 aa6.09□□□□□ -1.43
TRIM48-201ENST00000417545 LYRM9A8MSI8 78 aa6.09□□□□□ -1.43
TRIM48-201ENST00000417545 A8MWL6 223 aa6.09□□□□□ -1.43
TRIM48-201ENST00000417545 APOC3P02656 99 aa6.09□□□□□ -1.43
TRIM48-201ENST00000417545 CXCL1P09341 107 aa6.09□□□□□ -1.43
TRIM48-201ENST00000417545 DEFB130BP0DP73 79 aa6.09□□□□□ -1.43
TRIM48-201ENST00000417545 DEFB130AP0DP74 79 aa6.09□□□□□ -1.43
TRIM48-201ENST00000417545 FAM222AQ5U5X8 452 aa6.09□□□□□ -1.43
TRIM48-201ENST00000417545 SPANXN1Q5VSR9 72 aa6.09□□□□□ -1.43
TRIM48-201ENST00000417545 SLC7A5P1Q8MH63 180 aa6.09□□□□□ -1.43
TRIM48-201ENST00000417545 FER1L6-AS1Q8NA97 138 aa6.09□□□□□ -1.43
TRIM48-201ENST00000417545 C11orf45Q8TAV5 145 aa6.09□□□□□ -1.43
TRIM48-201ENST00000417545 MRPL16Q9NX20 251 aaKnown RBP6.09□□□□□ -1.43
TRIM48-201ENST00000417545 C11orf21Q9P2W6 132 aa6.09□□□□□ -1.43
TRIM48-201ENST00000417545 A0A1W2PPQ1 181 aa6.08□□□□□ -1.44
TRIM48-201ENST00000417545 GAGE12BA1L429 117 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms