RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 DEFB130AP0DP74 79 aa12.61□□□□□ -0.39
VCP-202ENST00000417448 HTN3P15516 51 aa12.61□□□□□ -0.39
VCP-202ENST00000417448 RAB5CP51148 216 aa12.61□□□□□ -0.39
VCP-202ENST00000417448 RNF212Q495C1 297 aa12.61□□□□□ -0.39
VCP-202ENST00000417448 C16orf74Q96GX8 76 aa12.61□□□□□ -0.39
VCP-202ENST00000417448 PYGO2Q9BRQ0 406 aa12.61□□□□□ -0.39
VCP-202ENST00000417448 GSN-AS1Q9NRJ2 163 aa12.61□□□□□ -0.39
VCP-202ENST00000417448 NAGKQ9UJ70 344 aa12.61□□□□□ -0.39
VCP-202ENST00000417448 IGHV1OR15-1A0A075B7D0 117 aa12.6□□□□□ -0.39
VCP-202ENST00000417448 TRBV7-9A0A0J9YWB2 115 aa12.6□□□□□ -0.39
VCP-202ENST00000417448 K7EQM0 130 aa12.6□□□□□ -0.39
VCP-202ENST00000417448 EIF4E3Q8N5X7 224 aaKnown RBP12.6□□□□□ -0.39
VCP-202ENST00000417448 TMEM75Q8N9X5 138 aa12.6□□□□□ -0.39
VCP-202ENST00000417448 TMEM263Q8WUH6 116 aaKnown RBP12.6□□□□□ -0.39
VCP-202ENST00000417448 LENEPQ9Y5L5 61 aa12.6□□□□□ -0.39
VCP-202ENST00000417448 SCO2A0A1W2PP80 73 aa12.59□□□□□ -0.39
VCP-202ENST00000417448 DAD1P61803 113 aa12.59□□□□□ -0.39
VCP-202ENST00000417448 KLF12Q9Y4X4 402 aa12.59□□□□□ -0.39
VCP-202ENST00000417448 ARL2-SNX15V9GYD0 113 aa12.59□□□□□ -0.39
VCP-202ENST00000417448 TRAV1-1A0A0B4J248 108 aa12.58□□□□□ -0.4
VCP-202ENST00000417448 SERTM2A0A1B0GWG4 89 aa12.58□□□□□ -0.4
VCP-202ENST00000417448 GNRH2O43555 120 aa12.58□□□□□ -0.4
VCP-202ENST00000417448 Q6AWC8 147 aa12.58□□□□□ -0.4
VCP-202ENST00000417448 C11orf72Q8NBR9 251 aa12.58□□□□□ -0.4
VCP-202ENST00000417448 NDFIP1Q9BT67 221 aa12.58□□□□□ -0.4
VCP-202ENST00000417448 NKX6-2Q9C056 277 aaPredicted RBP12.58□□□□□ -0.4
VCP-202ENST00000417448 C11orf21Q9P2W6 132 aa12.58□□□□□ -0.4
VCP-202ENST00000417448 FAT1Q14517 4588 aa12.58□□□□□ -0.4
VCP-202ENST00000417448 GCGP01275 180 aa12.57□□□□□ -0.4
VCP-202ENST00000417448 TMEM183BQ1AE95 376 aa12.57□□□□□ -0.4
VCP-202ENST00000417448 ANXA2RQ3ZCQ2 193 aa12.57□□□□□ -0.4
VCP-202ENST00000417448 ZNF493Q6ZR52 646 aa12.57□□□□□ -0.4
VCP-202ENST00000417448 Q86TA4 180 aa12.57□□□□□ -0.4
VCP-202ENST00000417448 TMEM183AQ8IXX5 376 aa12.57□□□□□ -0.4
VCP-202ENST00000417448 PCNPQ8WW12 178 aaKnown RBP12.57□□□□□ -0.4
VCP-202ENST00000417448 HIST1H2BAQ96A08 127 aa12.57□□□□□ -0.4
VCP-202ENST00000417448 FAM210BQ96KR6 192 aa12.57□□□□□ -0.4
VCP-202ENST00000417448 MDFICQ9P1T7 246 aa12.57□□□□□ -0.4
VCP-202ENST00000417448 TIMM8BQ9Y5J9 83 aaPredicted RBP12.57□□□□□ -0.4
VCP-202ENST00000417448 GAGE12BA1L429 117 aa12.56□□□□□ -0.4
VCP-202ENST00000417448 LYRM9A8MSI8 78 aa12.56□□□□□ -0.4
VCP-202ENST00000417448 SNURFLB1AK76 121 aa12.56□□□□□ -0.4
VCP-202ENST00000417448 GAGE7O76087 117 aa12.56□□□□□ -0.4
VCP-202ENST00000417448 GAGE12FP0CL80 117 aa12.56□□□□□ -0.4
VCP-202ENST00000417448 GAGE12GP0CL81 117 aa12.56□□□□□ -0.4
VCP-202ENST00000417448 GAGE12IP0CL82 117 aa12.56□□□□□ -0.4
VCP-202ENST00000417448 AKR1C3P42330 323 aa12.56□□□□□ -0.4
VCP-202ENST00000417448 SPATA12Q7Z6I5 190 aa12.56□□□□□ -0.4
VCP-202ENST00000417448 NHLRC2Q8NBF2 726 aa12.56□□□□□ -0.4
VCP-202ENST00000417448 LINC00467Q9BRT7 94 aa12.56□□□□□ -0.4
VCP-202ENST00000417448 PPT1P50897 306 aa12.55□□□□□ -0.4
VCP-202ENST00000417448 UBE2G1P62253 170 aa12.55□□□□□ -0.4
VCP-202ENST00000417448 SMUG1Q53HV7 270 aa12.55□□□□□ -0.4
VCP-202ENST00000417448 FAM159AQ6UWV7 190 aa12.55□□□□□ -0.4
VCP-202ENST00000417448 Q6ZTI0 123 aa12.55□□□□□ -0.4
VCP-202ENST00000417448 C6orf223Q8N319 242 aa12.55□□□□□ -0.4
VCP-202ENST00000417448 TRAV21A0A0B4J279 112 aa12.54□□□□□ -0.4
VCP-202ENST00000417448 EPM2AB3EWF7 344 aa12.54□□□□□ -0.4
VCP-202ENST00000417448 INAFM2P0DMQ5 153 aa12.54□□□□□ -0.4
VCP-202ENST00000417448 ZC2HC1AQ96GY0 325 aa12.54□□□□□ -0.4
VCP-202ENST00000417448 MANBALQ9NQG1 85 aa12.54□□□□□ -0.4
VCP-202ENST00000417448 TEX46H3BTG2 121 aa12.53□□□□□ -0.4
VCP-202ENST00000417448 CRIP1P50238 77 aa12.53□□□□□ -0.4
VCP-202ENST00000417448 SAPCD1Q5SSQ6 148 aa12.53□□□□□ -0.4
VCP-202ENST00000417448 FMC1Q96HJ9 113 aa12.53□□□□□ -0.4
VCP-202ENST00000417448 DERL1Q9BUN8 251 aa12.53□□□□□ -0.4
VCP-202ENST00000417448 MRPL16Q9NX20 251 aaKnown RBP12.53□□□□□ -0.4
VCP-202ENST00000417448 FLG2Q5D862 2391 aaPredicted RBP12.53□□□□□ -0.4
VCP-202ENST00000417448 SRRM2Q9UQ35 2752 aaKnown RBP12.53□□□□□ -0.4
VCP-202ENST00000417448 VPS13BQ7Z7G8 4022 aa12.53□□□□□ -0.4
VCP-202ENST00000417448 TRGV1A0A0A0MS02 117 aa12.52□□□□□ -0.41
VCP-202ENST00000417448 NBDYA0A0U1RRE5 68 aa12.52□□□□□ -0.41
VCP-202ENST00000417448 TEX48A0A1B0GUV7 120 aa12.52□□□□□ -0.41
VCP-202ENST00000417448 TYMSP04818 313 aa12.52□□□□□ -0.41
VCP-202ENST00000417448 KRTAP10-2P60368 255 aa12.52□□□□□ -0.41
VCP-202ENST00000417448 ZNF680Q8NEM1 530 aa12.52□□□□□ -0.41
VCP-202ENST00000417448 TCL1AP56279 114 aa12.51□□□□□ -0.41
VCP-202ENST00000417448 BLOC1S1P78537 153 aa12.51□□□□□ -0.41
VCP-202ENST00000417448 TMEM88Q6PEY1 159 aa12.51□□□□□ -0.41
VCP-202ENST00000417448 RAB19A4D1S5 217 aa12.5□□□□□ -0.41
VCP-202ENST00000417448 FBLL1A6NHQ2 334 aaKnown RBP12.5□□□□□ -0.41
VCP-202ENST00000417448 F5H768 121 aa12.5□□□□□ -0.41
VCP-202ENST00000417448 LTAP01374 205 aa12.5□□□□□ -0.41
VCP-202ENST00000417448 PFN1P07737 140 aaKnown RBP12.5□□□□□ -0.41
VCP-202ENST00000417448 BCL2P10415 239 aa12.5□□□□□ -0.41
VCP-202ENST00000417448 ZNF415Q09FC8 603 aa12.5□□□□□ -0.41
VCP-202ENST00000417448 DAZ2Q13117 558 aaKnown RBP12.5□□□□□ -0.41
VCP-202ENST00000417448 IGHV3-16A0A0C4DH30 117 aa12.49□□□□□ -0.41
VCP-202ENST00000417448 SPINK4O60575 86 aa12.49□□□□□ -0.41
VCP-202ENST00000417448 SH2D1AO60880 128 aa12.49□□□□□ -0.41
VCP-202ENST00000417448 IFNA1P01562 189 aa12.49□□□□□ -0.41
VCP-202ENST00000417448 IGHV3-53P01767 116 aa12.49□□□□□ -0.41
VCP-202ENST00000417448 FAM3BP58499 235 aaPredicted RBP12.49□□□□□ -0.41
VCP-202ENST00000417448 MEF2BQ02080 365 aaPredicted RBP12.49□□□□□ -0.41
VCP-202ENST00000417448 IBA57Q5T440 356 aaKnown RBP12.49□□□□□ -0.41
VCP-202ENST00000417448 LINC00612Q8N6U2 182 aa12.49□□□□□ -0.41
VCP-202ENST00000417448 ZNRF2Q8NHG8 242 aa12.49□□□□□ -0.41
VCP-202ENST00000417448 TCEAL7Q9BRU2 100 aa12.49□□□□□ -0.41
VCP-202ENST00000417448 SDF2L1Q9HCN8 221 aa12.49□□□□□ -0.41
VCP-202ENST00000417448 ZFP30Q9Y2G7 519 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms