RNA–Protein interactions for RNA: ENST00000416942.2

GTF3AP1-201, Transcript of general transcription factor IIIA pseudogene 1, humanhuman

BASIC

Gene GTF3AP1, Length 1,004 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3AP1-201ENST00000416942 PPDPFQ9H3Y8 114 aa3.47□□□□□ -1.85
GTF3AP1-201ENST00000416942 FAM74A7A6NL05 159 aa3.46□□□□□ -1.86
GTF3AP1-201ENST00000416942 CEBPZOSA8MTT3 80 aa3.46□□□□□ -1.86
GTF3AP1-201ENST00000416942 PDCD5O14737 125 aa3.46□□□□□ -1.86
GTF3AP1-201ENST00000416942 RNASE4P34096 147 aaKnown RBP3.46□□□□□ -1.86
GTF3AP1-201ENST00000416942 SPCS3P61009 180 aa3.46□□□□□ -1.86
GTF3AP1-201ENST00000416942 DNAL1Q4LDG9 190 aa3.46□□□□□ -1.86
GTF3AP1-201ENST00000416942 FAM74A3Q4VXF1 159 aa3.46□□□□□ -1.86
GTF3AP1-201ENST00000416942 SPINK6Q6UWN8 80 aa3.46□□□□□ -1.86
GTF3AP1-201ENST00000416942 DPPA3Q6W0C5 159 aa3.46□□□□□ -1.86
GTF3AP1-201ENST00000416942 Q6ZQT7 251 aa3.46□□□□□ -1.86
GTF3AP1-201ENST00000416942 IQCF2Q8IXL9 164 aa3.46□□□□□ -1.86
GTF3AP1-201ENST00000416942 EIF4E3Q8N5X7 224 aaKnown RBP3.46□□□□□ -1.86
GTF3AP1-201ENST00000416942 ZNF555Q8NEP9 628 aa3.46□□□□□ -1.86
GTF3AP1-201ENST00000416942 OR10P1Q8NGE3 313 aa3.46□□□□□ -1.86
GTF3AP1-201ENST00000416942 UFD1Q92890 307 aa3.46□□□□□ -1.86
GTF3AP1-201ENST00000416942 RMI2Q96E14 147 aa3.46□□□□□ -1.86
GTF3AP1-201ENST00000416942 LINC00477Q96M19 166 aa3.46□□□□□ -1.86
GTF3AP1-201ENST00000416942 TRAV26-2A0A0B4J265 109 aa3.45□□□□□ -1.86
GTF3AP1-201ENST00000416942 A0A0J9YXY3 114 aa3.45□□□□□ -1.86
GTF3AP1-201ENST00000416942 C7orf71A4D174 169 aa3.45□□□□□ -1.86
GTF3AP1-201ENST00000416942 FABP1P07148 127 aa3.45□□□□□ -1.86
GTF3AP1-201ENST00000416942 S100GP29377 79 aa3.45□□□□□ -1.86
GTF3AP1-201ENST00000416942 LEPP41159 167 aa3.45□□□□□ -1.86
GTF3AP1-201ENST00000416942 BTN1A1Q13410 526 aa3.45□□□□□ -1.86
GTF3AP1-201ENST00000416942 C9orf163Q8N9P6 203 aa3.45□□□□□ -1.86
GTF3AP1-201ENST00000416942 OR4D5Q8NGN0 318 aa3.45□□□□□ -1.86
GTF3AP1-201ENST00000416942 LYPD6BQ8NI32 183 aa3.45□□□□□ -1.86
GTF3AP1-201ENST00000416942 RNASE11Q8TAA1 199 aaKnown RBP3.45□□□□□ -1.86
GTF3AP1-201ENST00000416942 GPR82Q96P67 336 aa3.45□□□□□ -1.86
GTF3AP1-201ENST00000416942 MND1Q9BWT6 205 aa3.45□□□□□ -1.86
GTF3AP1-201ENST00000416942 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
GTF3AP1-201ENST00000416942 ZNF331Q9NQX6 463 aaPredicted RBP3.45□□□□□ -1.86
GTF3AP1-201ENST00000416942 DIABLOQ9NR28 239 aa3.45□□□□□ -1.86
GTF3AP1-201ENST00000416942 GABARAPH6UMI1 98 aa3.44□□□□□ -1.86
GTF3AP1-201ENST00000416942 TAAR5O14804 337 aa3.44□□□□□ -1.86
GTF3AP1-201ENST00000416942 GABARAPO95166 117 aa3.44□□□□□ -1.86
GTF3AP1-201ENST00000416942 PFN1P07737 140 aaKnown RBP3.44□□□□□ -1.86
GTF3AP1-201ENST00000416942 RAB3BP20337 219 aa3.44□□□□□ -1.86
GTF3AP1-201ENST00000416942 CIRBPQ14011 172 aaKnown RBP3.44□□□□□ -1.86
GTF3AP1-201ENST00000416942 SP6Q3SY56 376 aa3.44□□□□□ -1.86
GTF3AP1-201ENST00000416942 LAIR2Q6ISS4 152 aa3.44□□□□□ -1.86
GTF3AP1-201ENST00000416942 OR10G4Q8NGN3 311 aa3.44□□□□□ -1.86
GTF3AP1-201ENST00000416942 OR5H2Q8NGV7 314 aa3.44□□□□□ -1.86
GTF3AP1-201ENST00000416942 CYGBQ8WWM9 190 aa3.44□□□□□ -1.86
GTF3AP1-201ENST00000416942 UBE2WQ96B02 151 aa3.44□□□□□ -1.86
GTF3AP1-201ENST00000416942 TMEM101Q96IK0 257 aa3.44□□□□□ -1.86
GTF3AP1-201ENST00000416942 TP53RKQ96S44 253 aa3.44□□□□□ -1.86
GTF3AP1-201ENST00000416942 TMEM147Q9BVK8 224 aa3.44□□□□□ -1.86
GTF3AP1-201ENST00000416942 IFT46Q9NQC8 304 aa3.44□□□□□ -1.86
GTF3AP1-201ENST00000416942 KLK12Q9UKR0 248 aa3.44□□□□□ -1.86
GTF3AP1-201ENST00000416942 SSR3Q9UNL2 185 aa3.44□□□□□ -1.86
GTF3AP1-201ENST00000416942 LSM2Q9Y333 95 aaKnown RBP3.44□□□□□ -1.86
GTF3AP1-201ENST00000416942 SYNE2Q8WXH0 6885 aaKnown RBP3.43□□□□□ -1.86
GTF3AP1-201ENST00000416942 MUC21A0A0G2JKD1 596 aa3.43□□□□□ -1.86
GTF3AP1-201ENST00000416942 MPDU1O75352 247 aa3.43□□□□□ -1.86
GTF3AP1-201ENST00000416942 SLC25A5P05141 298 aaKnown RBP3.43□□□□□ -1.86
GTF3AP1-201ENST00000416942 RPL7P18124 248 aaKnown RBP3.43□□□□□ -1.86
GTF3AP1-201ENST00000416942 GNGT1P63211 74 aa3.43□□□□□ -1.86
GTF3AP1-201ENST00000416942 ERCC8Q13216 396 aa3.43□□□□□ -1.86
GTF3AP1-201ENST00000416942 NMSQ5H8A3 153 aa3.43□□□□□ -1.86
GTF3AP1-201ENST00000416942 TMEM252Q8N6L7 170 aa3.43□□□□□ -1.86
GTF3AP1-201ENST00000416942 OR4C5Q8NGB2 326 aa3.43□□□□□ -1.86
GTF3AP1-201ENST00000416942 C2orf50Q96LR7 162 aa3.43□□□□□ -1.86
GTF3AP1-201ENST00000416942 TRGV9Q99603 122 aa3.43□□□□□ -1.86
GTF3AP1-201ENST00000416942 C9orf16Q9BUW7 83 aa3.43□□□□□ -1.86
GTF3AP1-201ENST00000416942 TMEM222Q9H0R3 208 aa3.43□□□□□ -1.86
GTF3AP1-201ENST00000416942 GTSF1LQ9H1H1 148 aa3.43□□□□□ -1.86
GTF3AP1-201ENST00000416942 AUNIPQ9H7T9 357 aa3.43□□□□□ -1.86
GTF3AP1-201ENST00000416942 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.43□□□□□ -1.86
GTF3AP1-201ENST00000416942 RHBDL2Q9NX52 303 aa3.43□□□□□ -1.86
GTF3AP1-201ENST00000416942 TRAV1-2A0A0B4J238 106 aa3.42□□□□□ -1.86
GTF3AP1-201ENST00000416942 FABP12A6NFH5 140 aa3.42□□□□□ -1.86
GTF3AP1-201ENST00000416942 H3BRN7 92 aa3.42□□□□□ -1.86
GTF3AP1-201ENST00000416942 SLC17A3O00476 420 aa3.42□□□□□ -1.86
GTF3AP1-201ENST00000416942 SCGNO76038 276 aa3.42□□□□□ -1.86
GTF3AP1-201ENST00000416942 HLA-DQA1P01909 254 aa3.42□□□□□ -1.86
GTF3AP1-201ENST00000416942 MYL9P24844 172 aa3.42□□□□□ -1.86
GTF3AP1-201ENST00000416942 HLA-DMAP28067 261 aa3.42□□□□□ -1.86
GTF3AP1-201ENST00000416942 TSPAN5P62079 268 aa3.42□□□□□ -1.86
GTF3AP1-201ENST00000416942 CACNG7P62955 275 aa3.42□□□□□ -1.86
GTF3AP1-201ENST00000416942 TRAM1Q15629 374 aa3.42□□□□□ -1.86
GTF3AP1-201ENST00000416942 LPCAT3Q6P1A2 487 aa3.42□□□□□ -1.86
GTF3AP1-201ENST00000416942 ACOT7LQ6ZUV0 252 aa3.42□□□□□ -1.86
GTF3AP1-201ENST00000416942 LGI3Q8N145 548 aa3.42□□□□□ -1.86
GTF3AP1-201ENST00000416942 DHRSXQ8N5I4 330 aa3.42□□□□□ -1.86
GTF3AP1-201ENST00000416942 BPIFCQ8NFQ6 507 aa3.42□□□□□ -1.86
GTF3AP1-201ENST00000416942 SPACA4Q8TDM5 124 aa3.42□□□□□ -1.86
GTF3AP1-201ENST00000416942 SHANK2-AS3Q9BTD1 123 aa3.42□□□□□ -1.86
GTF3AP1-201ENST00000416942 ACOT13Q9NPJ3 140 aa3.42□□□□□ -1.86
GTF3AP1-201ENST00000416942 PLAC8Q9NZF1 115 aa3.42□□□□□ -1.86
GTF3AP1-201ENST00000416942 IGHV3-73A0A0B4J1V6 119 aa3.41□□□□□ -1.86
GTF3AP1-201ENST00000416942 TRAV4A0A0B4J268 109 aa3.41□□□□□ -1.86
GTF3AP1-201ENST00000416942 C3orf85A0A1B0GTC6 90 aa3.41□□□□□ -1.86
GTF3AP1-201ENST00000416942 GPX1P07203 203 aa3.41□□□□□ -1.86
GTF3AP1-201ENST00000416942 GNAO1P09471 354 aa3.41□□□□□ -1.86
GTF3AP1-201ENST00000416942 OR5G3P0C626 314 aa3.41□□□□□ -1.86
GTF3AP1-201ENST00000416942 OR10J4P0C629 311 aa3.41□□□□□ -1.86
GTF3AP1-201ENST00000416942 GPX4P36969 197 aaPredicted RBP3.41□□□□□ -1.86
GTF3AP1-201ENST00000416942 PRR9Q5T870 116 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms